TCONS_00044224 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044224
Unique NameTCONS_00044224
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length129

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044224 ID=TCONS_00044224|Name=TCONS_00044224|organism=Clytia hemisphaerica|type=transcript|length=129bp
TTATGAATCAGACCAAGATCTATTCGATCCTTATGACGAGAAGGATAACC
AAGTTAAAAATGTGCCAAATATTGACGATGATGATGAATTAAGCGACATA
TATGAAGAAGATCCTGCCATATCCAAAAC
Run BLAST on NCBI

transcript from alignment at sc0005199:247..771+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044224 ID=TCONS_00044224|Name=TCONS_00044224|organism=Clytia hemisphaerica|type=transcript|length=525bp|location=Sequence derived from alignment at sc0005199:247..771+ (Clytia hemisphaerica)
TTATGAATCAGACCAAGATCTATTCGATCCTTATGACGAGAAGGATAACC
AAGTTAAAAATGGTAAACAATTTCCTCTGTTTTAATTGACGGCTTAGTaa
tctgaaaaacttttaaataactAGAGGAGTGTAAAAAGATGAAATACAGC
TTCTTAAAAACAAGAGAAATACGGCTCATCATATACCAGGTTTCTTGCTC
TTAAGGGAGTTTTTTTCCAgctacacatttttttcttttattaccaACCA
TGTAGCTTAAGCTCCAGCCCTAAAATTAGGCAAAAAATTTTCACCATCAC
AATTTATTTTGCATATTTCTGAAAGGGGGAGAGTAGTAAGCCCTGAGAAA
GTTCACCAGGCACCAACTGTCAGTGAATTTCACTCACCACCCTCTATTTT
GATTCGCTGGTCACTCTGAAAATAATCTAACCCtgataaaaaatttgttt
ttatgcAGTGCCAAATATTGACGATGATGATGAATTAAGCGACATATATG
AAGAAGATCCTGCCATATCCAAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027868XLOC_027868Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044224-exon-sc0005199-1491911889:247..308TCONS_00044224-exon-sc0005199-1491911889:247..308Clytia hemisphaericaexon
TCONS_00044224-exon-sc0005199-1510915933:247..308TCONS_00044224-exon-sc0005199-1510915933:247..308Clytia hemisphaericaexon
TCONS_00044224-exon-sc0005199-1575043694:247..308TCONS_00044224-exon-sc0005199-1575043694:247..308Clytia hemisphaericaexon
TCONS_00044224-exon-sc0005199-1491911889:705..771TCONS_00044224-exon-sc0005199-1491911889:705..771Clytia hemisphaericaexon
TCONS_00044224-exon-sc0005199-1510915933:705..771TCONS_00044224-exon-sc0005199-1510915933:705..771Clytia hemisphaericaexon
TCONS_00044224-exon-sc0005199-1575043694:705..771TCONS_00044224-exon-sc0005199-1575043694:705..771Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005199supercontigsc0005199:247..771 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044224 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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