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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044204 ID=TCONS_00044204|Name=TCONS_00044204|organism=Clytia hemisphaerica|type=transcript|length=671bp
atcgctttcgtttttaagtGAAATGCGACGCTGTTTTAAATGCTTTGGTA
GGACACATTTGCATCCCTCTATAGCAGAGCGTGGTgtgcgcagaatggat
gatctggaTAGATAGATATGGATTTGTAGGTGCCTTTGACTTTTCAAATT
ATTGTTGACAACGATTTATGCGTTTTTGTTTTAGACGGCTTTACATGCAA
CCACTCCACCCGTGTGGCTCCCGTACACCGCTTTCGACCAAATACTCAAA
CCGCTACGATCGAACCAAGACAACCCAGAACTTGCTACACTTTTGCAACG
GTTGGAGACGAAGCTAGAGGAGTATTTCAACCAATTAGAAATCACCACTT
GCGATAAAATAGAATACGTCTCACGGACCCAACAACGTATGATGTAATGA
CGGGGTGACGTAACGCATTACGTAATGTTAATCGTCGAACTATAACCGCT
AATTAccttttttaattactttttttttaatcacgagATACATAAATGAA
TTGGAgaagaaaatatgtttttttttttactgtgGGGCCTCATAGCTTGG
CTTGAAAAAgatttcctttttaaaaataagttttctCCACAATTGAAATA
GGTTTCGTTACACCGAAACATATCAGAGTTACTGGTATCCTATTTGACAA
TttaatttcaagaaattgcGG Run BLAST on NCBI transcript from alignment at sc0005154:857..2534- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044204 ID=TCONS_00044204|Name=TCONS_00044204|organism=Clytia hemisphaerica|type=transcript|length=1678bp|location=Sequence derived from alignment at sc0005154:857..2534- (Clytia hemisphaerica)
ATCGCTTTCGTTTTTAAGTGAAATGCGACGCTGTTTTAAATGCTTTGGTA
GGACACATTTGCATCCCTCTATAGCAGAGCGTGGTGTGCGCAGAATGGAT
GATCTGGATAGATAGATATGGATTTGTAGGTGCCTTTGACTTTTCAAATT
ATTGTTGACAACGATTTATGCGTTTTTGTTTTAGACGGCTTTACATGCAA
CCACTCCACCCGTGTGGCTCCCGTACACCGCTTTCGACCAAATACTCAAA
CCGCTACGATCGAACCAAGACAACCCAGAACTTGCTACAGTAAGAATATG
TTCCATTTAAATATTTTTGATGGCTTTAATAGCTTCCTTATCAAGGCTAA
TTAGATGCTTTTAGATGCTCTTAAAATTAAATTCAATTGTCTTATCGGGA
GAAAAAAGATTCACAAATTCCAGTCAGGAAATTTAAACACTAGACATTTA
TTCCTTGCTTTTCCCGACAATCAATCGACATTGATTTTCCAATCAGTTAT
GCCAAATTGATCACCTTTTAAAACGACGGACAGAGTCGCTGCCAAAGGAT
TCGGCTCTTCTTTCTTTAGAGAATCATCCGAAAATACTAGCTATTTGGTA
TTGCCATATAGCATTCGTTTTAGCTTTGAGGTTTTATATATTGCCAAGTA
AAAAGCTTTTTGGACACAAGCCCTTATACCGATTAAGCGTCACTTCCTAC
CAGTGCAGAAAACCTAAGATAAAGGGTTATAGTTGATTTATCGTCTCTTC
TTTTTCTCCTCTGTCCCCAGAGGTAACAAGCGTTGAATTCAACTATCAAG
TAAAGAAGGATTCGAAATGAGTAGAGCCTTTTGAGAATGTCAAAAAAGAC
TTTAAGCAACTTAAACTATAGCGAGTACCTCACCAAAAACTCCGTTGAAA
TTTTTTTTTTTTTTTTAAAGTTTTTATAGGCTACTTTTACTATTGAAACT
TTCGGATAGGGAGGTTCGAATTCGAAACTTGGTATTCTTTGCTCAATTCA
AGTCACAGATATCATATTCCTTTACTCACTAGATTGACTAGTTGCTTACA
GATTTCCCGTGGAAGTGTGTCCAGTTTTAAAGTCGACTATTCCGTCATGT
TTTTTTCTAATTCACCTTAGATTTTCGAATTTCGTCCGAATTTCAAGACA
TTCGAATCTTGCTGATGACGACCGGAATAAGGTGGCGGACAAGCCAGTTC
TTAAACTGGACTCGTTTCCTTTTATGGGGGAAGCCTTATCCAGTCAAATA
TAGGGGTCAGTGATTCAACTCCTCCATTTTTTCATCTTTCTTTCAGCTTT
TGCAACGGTTGGAGACGAAGCTAGAGGAGTATTTCAACCAATTAGAAATC
ACCACTTGCGATAAAATAGAATACGTCTCACGGACCCAACAACGTATGAT
GTAATGACGGGGTGACGTAACGCATTACGTAATGTTAATCGTCGAACTAT
AACCGCTAATTACCTTTTTTAATTACTTTTTTTTTAATCACGAGATACAT
AAATGAATTGGAGAAGAAAATATGTTTTTTTTTTTACTGTGGGGCCTCAT
AGCTTGGCTTGAAAAAGATTTCCTTTTTAAAAATAAGTTTTCTCCACAAT
TGAAATAGGTTTCGTTACACCGAAACATATCAGAGTTACTGGTATCCTAT
TTGACAATTTAATTTCAAGAAATTGCGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044204-exon-sc0005154-1575043694:2246..2534 | TCONS_00044204-exon-sc0005154-1575043694:2246..2534 | Clytia hemisphaerica | exon |
| TCONS_00044204-exon-sc0005154-1575043694:857..1238 | TCONS_00044204-exon-sc0005154-1575043694:857..1238 | Clytia hemisphaerica | exon |
| TCONS_00044204-exon-sc0005154-1510915933:2246..2534 | TCONS_00044204-exon-sc0005154-1510915933:2246..2534 | Clytia hemisphaerica | exon |
| TCONS_00044204-exon-sc0005154-1510915933:857..1238 | TCONS_00044204-exon-sc0005154-1510915933:857..1238 | Clytia hemisphaerica | exon |
| TCONS_00044204-exon-sc0005154-1491911889:2246..2534 | TCONS_00044204-exon-sc0005154-1491911889:2246..2534 | Clytia hemisphaerica | exon |
| TCONS_00044204-exon-sc0005154-1491911889:857..1238 | TCONS_00044204-exon-sc0005154-1491911889:857..1238 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005154 | supercontig | sc0005154:857..2534 - |
Blast
The following BLAST results are available for this feature:
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