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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044095 ID=TCONS_00044095|Name=TCONS_00044095|organism=Clytia hemisphaerica|type=transcript|length=1118bp
caatatgccaaaaacattttgttcaaccaccttcacttcaagataagCCA
CCATCGattagaatgaacttccttttataggatgaacctaTAAttatgtg
gctttcagccttgcactccatcgaagttcattctatggtggcctatctta
aagtgaaggtggttgaacaaaatgtttttggcatattgatgtaactgtct
atTATAGCTTATAGATAGGTTTTGACACATTTTGACGAAACATGTGGAAA
cctcaaaaaaattctttcttggACAACCTATCACATAAACATgaattaat
tgataaaaaataaaattgaaataacttaTCTACATTGGAGCACTAAAAGA
TAACACTACAACAATCCAAACAAGAAATGATGTCGCcgttaaaacatcaa
aaaacataCTCCAAGCCAAAATGCAAGGTTTATCGAATACAAGTTCACAG
TATCTCGTaaggaaaacaaccaaaacaatcacacaagtttcaaaagttta
taaaatcCACAAAACCTCTGCTCTGACCTCATGAATGTAAGAACCAAGCA
TTAACTTGTTCCAGAGGTATTGTCCATGTAAGAGTTTGTATTCCAAAGCA
AATATTTCTTGTACTACCCATTCTTCTCATCAATTCTTTAACTTGCACTT
GGACCAGTTTCACATCTCAATAGAATGTTAATACCATTTTGCCaatcatt
taatgtccaaaGTTATGGGGATGTAGCGTTTTCTTCATGTCAAGCCAATG
TCTGTAATATCTTTACGTTGGTTGGTTTGGTATACGTATACGCGTTCAAC
AGGTAGAGGGCAAAGTGATTGTTTGTCCTTCTCTCGTACCCATGTTGGGT
TTTTAGCTTCAACCACTGTCGAAAGGTTGTCTGAGTcatccaaatatttt
tatcttttattttagatttgCTTTTTCTCAATATTGCTAACTGTAAATAA
TAAGTAGTAGATCGATTCATAAAAGGAAATAAAGATAAGATACAAAAATT
GAGATTTCCAACTTTGCatcatagaccttttcgcctttgcgtccgccata
ttgaattgtatgcaaaaattatggtggccgaattgccgtggtgaaattcc
cttagaaagtatgcaaaa Run BLAST on NCBI transcript from alignment at sc0004962:4029..5146 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044095 ID=TCONS_00044095|Name=TCONS_00044095|organism=Clytia hemisphaerica|type=transcript|length=1118bp|location=Sequence derived from alignment at sc0004962:4029..5146 (Clytia hemisphaerica)
ttttgcatactttctaagggaatttcaccacggcaattcggccaccataa
tttttgcatacaattcaatatggcggacgcaaaggcgaaaaggtctatga
tGCAAAGTTGGAAATCTCAATTTTTGTATCTTATCTTTATTTCCTTTTAT
GAATCGATCTACTACTTATTATTTACAGTTAGCAATATTGAGAAAAAGca
aatctaaaataaaagataaaaatatttggatgACTCAGACAACCTTTCGA
CAGTGGTTGAAGCTAAAAACCCAACATGGGTACGAGAGAAGGACAAACAA
TCACTTTGCCCTCTACCTGTTGAACGCGTATACGTATACCAAACCAACCA
ACGTAAAGATATTACAGACATTGGCTTGACATGAAGAAAACGCTACATCC
CCATAACtttggacattaaatgattGGCAAAATGGTATTAACATTCTATT
GAGATGTGAAACTGGTCCAAGTGCAAGTTAAAGAATTGATGAGAAGAATG
GGTAGTACAAGAAATATTTGCTTTGGAATACAAACTCTTACATGGACAAT
ACCTCTGGAACAAGTTAATGCTTGGTTCTTACATTCATGAGGTCAGAGCA
GAGGTTTTGTGgattttataaacttttgaaacttgtgtgattgttttggt
tgttttccttACGAGATACTGTGAACTTGTATTCGATAAACCTTGCATTT
TGGCTTGGAGtatgttttttgatgttttaacgGCGACATCATTTCTTGTT
TGGATTGTTGTAGTGTTATCTTTTAGTGCTCCAATGTAGAtaagttattt
caattttattttttatcaattaattcATGTTTATGTGATAGGTTGTccaa
gaaagaatttttttgaggTTTCCACATGTTTCGTCAAAATGTGTCAAAAC
CTATCTATAAGCTATAatagacagttacatcaatatgccaaaaacatttt
gttcaaccaccttcactttaagataggccaccatagaatgaacttcgatg
gagtgcaaggctgaaagccacataaTTAtaggttcatcctataaaaggaa
gttcattctaatCGATGGTGGcttatcttgaagtgaaggtggttgaacaa
aatgtttttggcatattg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044095-exon-sc0004962-1491911889:4029..5146 | TCONS_00044095-exon-sc0004962-1491911889:4029..5146 | Clytia hemisphaerica | exon |
| TCONS_00044095-exon-sc0004962-1510915933:4029..5146 | TCONS_00044095-exon-sc0004962-1510915933:4029..5146 | Clytia hemisphaerica | exon |
| TCONS_00044095-exon-sc0004962-1575043694:4029..5146 | TCONS_00044095-exon-sc0004962-1575043694:4029..5146 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004962 | supercontig | sc0004962:4029..5146 . |
Blast
The following BLAST results are available for this feature:
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