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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044037 ID=TCONS_00044037|Name=TCONS_00044037|organism=Clytia hemisphaerica|type=transcript|length=1331bp
GAAGAGGAAAGATCAACgaacttgtttttctttaataatatattatatta
taaattCGAAGGATTAATCGTCGCCCTACTTTTTACAGATAATGAACCAG
CGGTTTATTTACTAACTTGGGTCACTATCAGCTTTCAAAAATATATCTTT
GACATTCCTTTGACAGTGGCTACTAAATTTCTCTTTGGATTGATTGGTTT
ATTCATAGTTCGTATAAAATACCCTGGTCTGGAAACCTATTGtggtcact
gacctttatatattccTGGagcaagctatatccgccatctttgatcggag
tttttttagaattagtacccgagaagaagccattgcagtgttaaaaaata
ACGTNtcgggcttgaaactcaatgattggtacccgagaagaaaccattgc
agtgttaaaaaataacgcctaacggcgctacatcatctaTAGTATTGAAa
ggaaagtagacctagcgctttAGGCTTCGAGAGGTTTCTTTATATGGACT
ATGGTTTATTCAAGATTCAAAGGCATTTCTTCTGTAATGTTACCTTTACT
GTTCAAATAAAGACTGCTTAGATATGAAATAATTGGTGTTAAAAATTAtt
caccttttcgaccgtagcctcCAATTACTGCGCGGGCATTtatttgtccg
ttttaccaccctaaaaccatccCTGTCTTTTTTtagcacctaaagacaat
agaaaaaagtgtaaaaaaggatcggatcgagtttagggtggtaaattaaa
taaattggcacgcgcctgaccgcgcgactacggtcgaaaaggtgtattgg
ttTAGCAGAGTCAATTGGCGTTGAATGCGTCGGACGTCTATCAACTTTTC
CTCCACAAGGGCAAAGGGTTCGAGTTTAAAAGGGTCGAATGACGTCAGTA
TCTCATGCCAATGCAATGATTTGAAATTTCAGACATTTTAACATCATTCA
ATTGAggtcaaatttgaattttgtcAATTCTCTTTCGTATAGCTTTTAGT
TAAAGGGTTGATGGGTGATGTAACTAATTCACTGTTACTTGTTGATATCA
TTTAACCCTACCAAACTCGATTCCACTCTCCTTCTCGTAAGATTAAGCTT
CGAAAGGGTTTTATTTGAACAGGATAATTTCCTGTTTGGAATTTTGACCG
TATTGTTATAGCCTATTATacagagaaatattttattttttaaaacgtga
aaatcccttttttttgtttgtttgccCCTTTGTTAGTTTGAAATTTATTT
AGTTGAATCAATTTGACAAttagttttaacatttttaaaaattctttatt
ttttatttttaaaaaccaaTCTTTCTTCTTN Run BLAST on NCBI transcript from alignment at sc0004870:4050..5380 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044037 ID=TCONS_00044037|Name=TCONS_00044037|organism=Clytia hemisphaerica|type=transcript|length=1331bp|location=Sequence derived from alignment at sc0004870:4050..5380 (Clytia hemisphaerica)
NAAGAAGAAAGAttggtttttaaaaataaaaaataaagaatttttaaaaa
tgttaaaactaaTTGTCAAATTGATTCAACTAAATAAATTTCAAACTAAC
AAAGGggcaaacaaacaaaaaaaagggattttcacgttttaaaaaataaa
atatttctctgtATAATAGGCTATAACAATACGGTCAAAATTCCAAACAG
GAAATTATCCTGTTCAAATAAAACCCTTTCGAAGCTTAATCTTACGAGAA
GGAGAGTGGAATCGAGTTTGGTAGGGTTAAATGATATCAACAAGTAACAG
TGAATTAGTTACATCACCCATCAACCCTTTAACTAAAAGCTATACGAAAG
AGAATTgacaaaattcaaatttgaccTCAATTGAATGATGTTAAAATGTC
TGAAATTTCAAATCATTGCATTGGCATGAGATACTGACGTCATTCGACCC
TTTTAAACTCGAACCCTTTGCCCTTGTGGAGGAAAAGTTGATAGACGTCC
GACGCATTCAACGCCAATTGACTCTGCTAaaccaatacaccttttcgacc
gtagtcgcgcggtcaggcgcgtgccaatttatttaatttaccaccctaaa
ctcgatccgatccttttttacacttttttctattgtctttaggtgctaAA
AAAAGACAGggatggttttagggtggtaaaacggacaaataAATGCCCGC
GCAGTAATTGgaggctacggtcgaaaaggtgaaTAATTTTTAACACCAAT
TATTTCATATCTAAGCAGTCTTTATTTGAACAGTAAAGGTAACATTACAG
AAGAAATGCCTTTGAATCTTGAATAAACCATAGTCCATATAAAGAAACCT
CTCGAAGCCTaaagcgctaggtctactttcctTTCAATACTAtagatgat
gtagcgccgttaggcgttattttttaacactgcaatggtttcttctcggg
taccaatcattgagtttcaagcccgaNACGTtattttttaacactgcaat
ggcttcttctcgggtactaattctaaaaaaactccgatcaaagatggcgg
atatagcttgctCCAggaatatataaaggtcagtgaccaCAATAGGTTTC
CAGACCAGGGTATTTTATACGAACTATGAATAAACCAATCAATCCAAAGA
GAAATTTAGTAGCCACTGTCAAAGGAATGTCAAAGATATATTTTTGAAAG
CTGATAGTGACCCAAGTTAGTAAATAAACCGCTGGTTCATTATCTGTAAA
AAGTAGGGCGACGATTAATCCTTCGaatttataatataatatattattaa
agaaaaacaagttcGTTGATCTTTCCTCTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044037-exon-sc0004870-1491911889:4050..5380 | TCONS_00044037-exon-sc0004870-1491911889:4050..5380 | Clytia hemisphaerica | exon |
| TCONS_00044037-exon-sc0004870-1510915933:4050..5380 | TCONS_00044037-exon-sc0004870-1510915933:4050..5380 | Clytia hemisphaerica | exon |
| TCONS_00044037-exon-sc0004870-1575043694:4050..5380 | TCONS_00044037-exon-sc0004870-1575043694:4050..5380 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004870 | supercontig | sc0004870:4050..5380 . |
Blast
The following BLAST results are available for this feature:
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