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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043997 ID=TCONS_00043997|Name=TCONS_00043997|organism=Clytia hemisphaerica|type=transcript|length=914bp
CTTCTTGGCTATATCATGACTATTTTTGGGACCACTTTGATTTCTCATTG
GATCCAGAAATTTTAAGATTGTAAGTCTTAAGTTTAGTGTTTAAACTCTA
CCTTCCAGAAGTCaattaaagtaattaaaatcCTTTGTAGTGTTCAAAGT
ATTGCAGGGAAATTCCCTTTCATCAAATGTTATGTAATtcattgtacaaa
aaaattactACAACCTGCCTTCAAAAGTTGAAAGGTGAGCANAATGTTAT
GTAATtcattgtacaaaaaaattactACAACCTGCCTTCAAAAGTTGAAA
GGTgagctaaaatcaaaacaatcttaTAGAAGTATAAAGTAGAGACTaat
aaagttaaaataaaattcttacCCTCCTCCTGCAAGAGGCTGGCCAAATC
GAAAGACTTACCCATCAAATGTAAGCAatgtttttccttgaaaaatacgt
gGAAAATTATCATGACATAAACAAGGTTTTCATTAACCCTTAAGCAAAGT
TTTCGACACTGAAGCTAGTTGACTTGAAACGGTTATTTTGGCCTTCGAAG
AAACCCTTTTTACTGATACGATCAGGTTATAAGCAACTAGACTTATAAAA
CCTTAAATACTCGAAAAAGGATTCTCGGTACATCACTCACTTTGGCAAGC
TGCCTAACCCTAACAGAGAATCAAGAAATTTCTTACCTTTTTCCTTAATG
AGGCTGACCAACTCGATGTTGATGCCGGTAAGAAACATTTTGTGTTTTTC
CTTGAAACAAAACAATGTTTTCGTAAAGTCCTAACTCCTAGGCGACCTAA
ACGTCTTAAAATCTTCTGGGTTACTAacaccatggaggtaataaagatag
atggagagtcaatgccttttgttctattctgatttatcatcggaagcaaa
cagctgtttggttg Run BLAST on NCBI transcript from alignment at sc0004825:4314..5227 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043997 ID=TCONS_00043997|Name=TCONS_00043997|organism=Clytia hemisphaerica|type=transcript|length=914bp|location=Sequence derived from alignment at sc0004825:4314..5227 (Clytia hemisphaerica)
caaccaaacagctgtttgcttccgatgataaatcagaatagaacaaaagg
cattgactctccatctatctttattacctccatggtgtTAGTAACCCAGA
AGATTTTAAGACGTTTAGGTCGCCTAGGAGTTAGGACTTTACGAAAACAT
TGTTTTGTTTCAAGGAAAAACACAAAATGTTTCTTACCGGCATCAACATC
GAGTTGGTCAGCCTCATTAAGGAAAAAGGTAAGAAATTTCTTGATTCTCT
GTTAGGGTTAGGCAGCTTGCCAAAGTGAGTGATGTACCGAGAATCCTTTT
TCGAGTATTTAAGGTTTTATAAGTCTAGTTGCTTATAACCTGATCGTATC
AGTAAAAAGGGTTTCTTCGAAGGCCAAAATAACCGTTTCAAGTCAACTAG
CTTCAGTGTCGAAAACTTTGCTTAAGGGTTAATGAAAACCTTGTTTATGT
CATGATAATTTTCcacgtatttttcaaggaaaaacatTGCTTACATTTGA
TGGGTAAGTCTTTCGATTTGGCCAGCCTCTTGCAGGAGGAGGgtaagaat
tttattttaactttattAGTCTCTACTTTATACTTCTAtaagattgtttt
gattttagctcACCTTTCAACTTTTGAAGGCAGGTTGTagtaattttttt
gtacaatgaATTACATAACATTNTGCTCACCTTTCAACTTTTGAAGGCAG
GTTGTagtaatttttttgtacaatgaATTACATAACATTTGATGAAAGGG
AATTTCCCTGCAATACTTTGAACACTACAAAGgattttaattactttaat
tGACTTCTGGAAGGTAGAGTTTAAACACTAAACTTAAGACTTACAATCTT
AAAATTTCTGGATCCAATGAGAAATCAAAGTGGTCCCAAAAATAGTCATG
ATATAGCCAAGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043997-exon-sc0004825-1491911889:4314..5227 | TCONS_00043997-exon-sc0004825-1491911889:4314..5227 | Clytia hemisphaerica | exon |
| TCONS_00043997-exon-sc0004825-1510915933:4314..5227 | TCONS_00043997-exon-sc0004825-1510915933:4314..5227 | Clytia hemisphaerica | exon |
| TCONS_00043997-exon-sc0004825-1575043694:4314..5227 | TCONS_00043997-exon-sc0004825-1575043694:4314..5227 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004825 | supercontig | sc0004825:4314..5227 . |
Blast
The following BLAST results are available for this feature:
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