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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043940 ID=TCONS_00043940|Name=TCONS_00043940|organism=Clytia hemisphaerica|type=transcript|length=550bp
AATTACTCAAATATTTCTGTCGTCATCTTCAACGAGTAACAAAGTACAAA
GACAGGAATTTGATGTCAGGAGAAAATTTGGGTATTGTATTTGGCCCAAC
GTTAATGAGGGCGCCCGACCATTTAGCTTTGGAAGCGGTCGGTTATATAC
CTTACCAAAAGAAGATTATCCAATCGTTGATTGAAGAGCAAGATGTTCTC
TTTGAAAGATAAATTATGATATCTCTTGACAGTTGACAGACAGTGTTGgt
gcgagtttatgtatctatGTTTTTCTGCAACGGAGACGGTTAGTTTTTCA
ACTGTCTAGATCCTGATCCACTCAGAACAAATCCAGCACTTATACCGTCC
TGGACTTTACGGATCTGCTACAAGCTGTTCCCAATCGATTTAGTCACGCA
GCCGTTCTCATAAATGCAGATATATAAACATAAACTCGCATGTGTTGGAT
ATTGGAAGGGGCTTCAAAGCTCACGACAGTCCTGAACTATGCTTTAAATT
GTCCCACAAGATCTCGCTTGTTCAAGTCTGCTTTTAAAATAAACTTAANN Run BLAST on NCBI transcript from alignment at sc0004751:1..981+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043940 ID=TCONS_00043940|Name=TCONS_00043940|organism=Clytia hemisphaerica|type=transcript|length=981bp|location=Sequence derived from alignment at sc0004751:1..981+ (Clytia hemisphaerica)
AATTACTCAAATATTTCTGTCGTCATCTTCAACGGTAAGCCCTATAaaat
gatatgcaccactggaaagtcttctgagaatttttaaaattaaattaaac
aatagaaaaagtgacgtacaGTATTGGGTGgaataaaaacagaaaagttg
cataatttcgtgaagtcattgcagtggtgcatatcatgaataaaattata
ttcatcTTATATTCTTTATACGTTATAGATATTCACAAGGTGGGCGGTGT
CTTTTTTCGGACCTCGGTGACATACCTCTTGTTGATTTGGTAGGGCTAAT
CACCTTAGGTGGACTTTAGATTCTGTGACATTTCGCAGGAAAAGGGAAAA
TGAAAGTTTCCTTTGTATCGACAACGAGTTGTAATGAATCGTAGTAGCTC
TATCCTCAGTAAGAGCCTAATTTGAATTGttgattttaaattatttattt
cttcttttttgctaGAGTAACAAAGTACAAAGACAGGAATTTGATGTCAG
GAGAAAATTTGGGTATTGTATTTGGCCCAACGTTAATGAGGGCGCCCGAC
CATTTAGCTTTGGAAGCGGTCGGTTATATACCTTACCAAAAGAAGATTAT
CCAATCGTTGATTGAAGAGCAAGATGTTCTCTTTGAAAGATAAATTATGA
TATCTCTTGACAGTTGACAGACAGTGTTGgtgcgagtttatgtatctatG
TTTTTCTGCAACGGAGACGGTTAGTTTTTCAACTGTCTAGATCCTGATCC
ACTCAGAACAAATCCAGCACTTATACCGTCCTGGACTTTACGGATCTGCT
ACAAGCTGTTCCCAATCGATTTAGTCACGCAGCCGTTCTCATAAATGCAG
ATATATAAACATAAACTCGCATGTGTTGGATATTGGAAGGGGCTTCAAAG
CTCACGACAGTCCTGAACTATGCTTTAAATTGTCCCACAAGATCTCGCTT
GTTCAAGTCTGCTTTTAAAATAAACTTAANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043940-exon-sc0004751-1491911889:1..34 | TCONS_00043940-exon-sc0004751-1491911889:1..34 | Clytia hemisphaerica | exon |
| TCONS_00043940-exon-sc0004751-1510915933:1..34 | TCONS_00043940-exon-sc0004751-1510915933:1..34 | Clytia hemisphaerica | exon |
| TCONS_00043940-exon-sc0004751-1575043694:1..34 | TCONS_00043940-exon-sc0004751-1575043694:1..34 | Clytia hemisphaerica | exon |
| TCONS_00043940-exon-sc0004751-1491911889:466..981 | TCONS_00043940-exon-sc0004751-1491911889:466..981 | Clytia hemisphaerica | exon |
| TCONS_00043940-exon-sc0004751-1510915933:466..981 | TCONS_00043940-exon-sc0004751-1510915933:466..981 | Clytia hemisphaerica | exon |
| TCONS_00043940-exon-sc0004751-1575043694:466..981 | TCONS_00043940-exon-sc0004751-1575043694:466..981 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004751 | supercontig | sc0004751:1..981 + |
Blast
The following BLAST results are available for this feature:
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