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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043857 ID=TCONS_00043857|Name=TCONS_00043857|organism=Clytia hemisphaerica|type=transcript|length=1041bp
ggCAGAAAATGGTCGAATTcatgaataaaatgaaaaaaatgaacataaaa
ttctcaaaaccttgaaaatttggtagtctgtaaagcaatgaaaataaaaa
tgcactagcaaaataaattttatttttattttattttggaatttcagggt
cggtcagacCCATAAAACATACAGCCTAGNAAATCaagcaacaaaaaaag
aaaggaaatgATCTTGACTATGTACTTAATTTCACGAAAATAATACCTAC
AATGCAGAGAGCATTATTGAAACTGATAAGTTAAAGAAAAGTAACagtat
aaaaaacattttcacaaaaCAACAACATAAAGGCTGAACAATACAGCCTA
ATTATAAAGTAAAAAACTAAAACTGAATAAATATAATTCTTATGAAACTC
ATTGAGAAATTGAATATAATTTGTTACATGTTTACCCAAGcacaaacaaa
cacaaaaaaaagtATGATACAATAAAAAAGACTACAAAACTACTTACAAA
TTAAAAAGAGGCCACACAGTGAAACACAAAGCATGCTATATCTATCTGGA
TAAGTCTAGACACAAAGCTTTTGATCTTGATTAATAATGTAAAAGTAGTG
TCATTTCAATTATATTCATTGTTATTAGACAAGTAGtgcaaattttaaaa
aaaaaNACAGTGAAACACAAAGCATGCTATATCTATCTGGATAAGTCTAG
ACACAAAGCTTTTGATCTTGATTAATAATGTAAAAGTAGTGTCATTTCAA
TTATATTCATTGTTATTAGACAAGTAgtgcaaattaaaaaaaaaaaattt
aaattgtggTTTGTCTTAAATGCACCTTGTCAATGGGTTGATTAGTAGAT
TAGATTattataatataaatatttgttATAAAATGATTctagaaattatt
aaaaattttgtaaattgtaTAAAAAAGGAGAACAAAATAATTAGAACTGT
TTACccaaaatgaagatttgaaaaaaattattcaattgtcTGACACACAC
TCTTCAAGTAGACTGTAAACTCCTTTCTTGCTGGCTTTTAG Run BLAST on NCBI transcript from alignment at sc0004670:8..1048 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043857 ID=TCONS_00043857|Name=TCONS_00043857|organism=Clytia hemisphaerica|type=transcript|length=1041bp|location=Sequence derived from alignment at sc0004670:8..1048 (Clytia hemisphaerica)
CTAAAAGCCAGCAAGAAAGGAGTTTACAGTCTACTTGAAGAGTGTGTGTC
AgacaattgaataatttttttcaaatcttcattttggGTAAACAGTTCTA
ATTATTTTGTTCTCCTTTTTTAtacaatttacaaaatttttaataatttc
tagAATCATTTTATaacaaatatttatattataatAATCTAATCTACTAA
TCAACCCATTGACAAGGTGCATTTAAGACAAAccacaatttaaatttttt
ttttttaatttgcacTACTTGTCTAATAACAATGAATATAATTGAAATGA
CACTACTTTTACATTATTAATCAAGATCAAAAGCTTTGTGTCTAGACTTA
TCCAGATAGATATAGCATGCTTTGTGTTTCACTGTNtttttttttaaaat
ttgcaCTACTTGTCTAATAACAATGAATATAATTGAAATGACACTACTTT
TACATTATTAATCAAGATCAAAAGCTTTGTGTCTAGACTTATCCAGATAG
ATATAGCATGCTTTGTGTTTCACTGTGTGGCCTCTTTTTAATTTGTAAGT
AGTTTTGTAGTCTTTTTTATTGTATCATacttttttttgtgtttgtttgt
gCTTGGGTAAACATGTAACAAATTATATTCAATTTCTCAATGAGTTTCAT
AAGAATTATATTTATTCAGTTTTAGTTTTTTACTTTATAATTAGGCTGTA
TTGTTCAGCCTTTATGTTGTTGttttgtgaaaatgttttttatactGTTA
CTTTTCTTTAACTTATCAGTTTCAATAATGCTCTCTGCATTGTAGGTATT
ATTTTCGTGAAATTAAGTACATAGTCAAGATcatttcctttctttttttg
ttgcttGATTTNCTAGGCTGTATGTTTTATGGgtctgaccgaccctgaaa
ttccaaaataaaataaaaataaaatttattttgctagtgcatttttattt
tcattgctttacagactaccaaattttcaaggttttgagaattttatgtt
catttttttcattttattcatgAATTCGACCATTTTCTGcc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043857-exon-sc0004670-1491911889:8..1048 | TCONS_00043857-exon-sc0004670-1491911889:8..1048 | Clytia hemisphaerica | exon |
| TCONS_00043857-exon-sc0004670-1510915933:8..1048 | TCONS_00043857-exon-sc0004670-1510915933:8..1048 | Clytia hemisphaerica | exon |
| TCONS_00043857-exon-sc0004670-1575043694:8..1048 | TCONS_00043857-exon-sc0004670-1575043694:8..1048 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004670 | supercontig | sc0004670:8..1048 . |
Blast
The following BLAST results are available for this feature:
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