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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043855 ID=TCONS_00043855|Name=TCONS_00043855|organism=Clytia hemisphaerica|type=transcript|length=523bp
TATTGGCCCAGCGTTAGCGAACGGGCCTTTCAAAAGCAACTGTCTGTTTG
TCcgtcccactttcgttttcgtttttacAAAAACCGCGCTCCTTCTAAAT
TGTAGACTAGCAAGTGTCCGTATTGCGTATTGTATTCAGTGAAGGGAGTG
AGTCTGTTGCAAGTGGAGCTGCAGACTGAAATACCACTCAGGCAttttaa
ggcatgtccaaattttctgtaatttttaaacaccaatagcactcgccaag
aggtgttcattcatacctttttggaNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNACAGATTTATTGATATACAATCGTTATTTTTCGT
GATTATTCATCCTTTTACTGTGTTGTTTGCTGCTTGCTCATTTGTAAAAC
AAgagctTGAAAACCAACTGCGTGGACAACTCCTGACCAGTTGTCATCTC
TGTCTTACCCATCATTATGACTGATTTATTCAGGTTGGTACTTACTGAGA
TAGAGGGGGAATCGAAAGCATAG Run BLAST on NCBI transcript from alignment at sc0004667:3443..5031- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043855 ID=TCONS_00043855|Name=TCONS_00043855|organism=Clytia hemisphaerica|type=transcript|length=1589bp|location=Sequence derived from alignment at sc0004667:3443..5031- (Clytia hemisphaerica)
TATTGGCCCAGCGTTAGCGAACGGGCCTTTCAAAAGCAACTGTCTGTTTG
TCCGTCCCACTTTCGTTTTCGTTTTTACAAAAACCGCGCTCCTTCTAAAT
TGTAGACTAGCAAGTGTCCGTATTGCGTATTGTATTCAGTGAAGGGAGTG
AGTCTGTTGCAAGTGGAGCTGCAGACTGAAATACCACTCAGGCATTTTAA
GGCATGTCCAAATTTTCTGTAATTTTTAAACACCAATAGCACTCGCCAAG
AGGTGTTCATTCATACCTTTTTGGANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNACAGATTTATTGATATACAATCGTTATTTTTCGT
GATTATTCATCCTTTTACTGTGTTGTTTGCTGCTTGCTCATTTGTAAAAC
AAGAGGTATGTATTTTTTTTGGAGTAAAATTTTTCAGATCGAGTAGAATA
GGCCACAAAACGTCTAATCCTGACCACCCCTTTCTAATCCCGACTTACCT
CTAAAATAAACAATTTTTCCAAATTTAGATGGTATAGGGGACAACGCTTA
ATAGAGGGCGGTGCTTGATAGAGGGAATTCTGTGGTCGCGGCCTTGTCTG
ATCAAACGCAATCGAACATCATTGTCCATGACTGCATGAATCGAACGAAT
CAAACGTAATTGACAGTCAATCAAACCAATCATTAACGCACGTCCCTGGC
AACCCCCAGAAATTTCCAGGGCGATATGGGGGTAGACATTAACTGCCCGG
TTTTCCTCTTGCCTATTCTTCTTATTACAATATGCATGATACAGTAATTA
TGCATGGCTTTATCATTGTTTTTATGGCTGGACTACATAATTATTCAACA
GGATGTCCTCTTTGAAAAAAGGTCTATTCTCTTTTACATCTTTGGGACCG
TCTTTGACGAAAGATTTTCGAATTTTTTATCGGCATTTGGCCGATTAGGT
GGGAGAAGTTCCAACTACATGCCGATAAAAAAGCAAGTATTGTGACGAAA
ATCTTTTTAGCCAATTTCTTTCTGATTTCGTCCACAAACTTCACTGAAAG
CATACAATTTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNTTTTTCTGATTTTTTCACGGACCGTGAAAATTAGTT
CCCTTTAAGGTACATAGAATAAACATAGCAGAAATATTATTAGAACAACC
TTTCATCTGCTTCAAAACGGCTATAAAATTGGTAAATTTTTTGATGTTAA
ATTAATATTTCTTCTTTTTAGCTTGAAAACCAACTGCGTGGACAACTCCT
GACCAGTTGTCATCTCTGTCTTACCCATCATTATGACTGATTTATTCAGG
TTGGTACTTACTGAGATAGAGGGGGAATCGAAAGCATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043855-exon-sc0004667-1575043694:4627..5031 | TCONS_00043855-exon-sc0004667-1575043694:4627..5031 | Clytia hemisphaerica | exon |
| TCONS_00043855-exon-sc0004667-1575043694:3443..3560 | TCONS_00043855-exon-sc0004667-1575043694:3443..3560 | Clytia hemisphaerica | exon |
| TCONS_00043855-exon-sc0004667-1510915933:4627..5031 | TCONS_00043855-exon-sc0004667-1510915933:4627..5031 | Clytia hemisphaerica | exon |
| TCONS_00043855-exon-sc0004667-1510915933:3443..3560 | TCONS_00043855-exon-sc0004667-1510915933:3443..3560 | Clytia hemisphaerica | exon |
| TCONS_00043855-exon-sc0004667-1491911889:4627..5031 | TCONS_00043855-exon-sc0004667-1491911889:4627..5031 | Clytia hemisphaerica | exon |
| TCONS_00043855-exon-sc0004667-1491911889:3443..3560 | TCONS_00043855-exon-sc0004667-1491911889:3443..3560 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004667 | supercontig | sc0004667:3443..5031 - |
Blast
The following BLAST results are available for this feature:
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