TCONS_00043655 (transcript) - C. hemisphaerica

Overview
NameTCONS_00043655
Unique NameTCONS_00043655
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length177

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00043655 ID=TCONS_00043655|Name=TCONS_00043655|organism=Clytia hemisphaerica|type=transcript|length=177bp
gaaattgccACATTCGACCAACCCGAGAAACTGTTAAATTCAAGGAATGA
ACTGATCTCGAAATGTCGGCACGTGAATAAGTTCACCCTCAAACTCCACG
ACACCAAAGactgaaatgacgtcaattGCTTTGACGAAGACTTTACAGTG
cacagtatatttttgtaaacttgaAAC
Run BLAST on NCBI

transcript from alignment at sc0004440:5329..5505

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00043655 ID=TCONS_00043655|Name=TCONS_00043655|organism=Clytia hemisphaerica|type=transcript|length=177bp|location=Sequence derived from alignment at sc0004440:5329..5505 (Clytia hemisphaerica)
GTTtcaagtttacaaaaatatactgtgCACTGTAAAGTCTTCGTCAAAGC
aattgacgtcatttcagtCTTTGGTGTCGTGGAGTTTGAGGGTGAACTTA
TTCACGTGCCGACATTTCGAGATCAGTTCATTCCTTGAATTTAACAGTTT
CTCGGGTTGGTCGAATGTggcaatttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027339XLOC_027339Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043655-exon-sc0004440-1491911889:5329..5505TCONS_00043655-exon-sc0004440-1491911889:5329..5505Clytia hemisphaericaexon
TCONS_00043655-exon-sc0004440-1510915933:5329..5505TCONS_00043655-exon-sc0004440-1510915933:5329..5505Clytia hemisphaericaexon
TCONS_00043655-exon-sc0004440-1575043694:5329..5505TCONS_00043655-exon-sc0004440-1575043694:5329..5505Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004440supercontigsc0004440:5329..5505 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043655 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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