|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043590 ID=TCONS_00043590|Name=TCONS_00043590|organism=Clytia hemisphaerica|type=transcript|length=6894bp
CTCGCAATATGTGAACAATCAATCGACGGTTCCAACACCAAGAGGAGGAC
AGAATGATGTTTCTTCAATAACAATAACAAGATGAGGACAGAACGATGTT
TCAGCAACAACAAAAGGAGGGCAGAATGATGTTTCAGCAACAACAGGACG
TAGAAGAGATgatatttcaacaacaagatgAAGACTGAATGATGTTTCGA
CAACAACATCAAGAAGAGGGCAGAGTggtgtttcaacaacaagaggAGGG
CAGGGTGATGTTTGAATAGTGATTCTCTTATTTCCAATCAATACCTACCC
CAACCGTTAATCGATACCGAGCCCAACTACCAATCGATACCGACTTCAAC
TTCAAATCGATAATGACCCCAAGTTCCAATCATTACCGACGCCATCATCC
ATTTCCATATTTGTGGATGACTTAAAATTGATTCACaatttccttgaaat
ttatACTTTTAGTCAAAATCAGCTATGCTAAATTTAGCTGAAAAATGCTA
TTAAAATTCATCTTCTTTTCTTCACTGTAAGGCTGTAAGTGATAAGTTTT
CAATAAACAGGTTTAGAACACTGAAAAGCTCTAGAACTGAACttaatatt
ttctatttttcaaattttagccaTTGACCAGTCAAACTTGATTAAGCGTG
GTCGACCGAAAAAAGGAAGGAAAATATCGATCGATAACGATTTGTTACTG
GAAATACTAAGATCCGAAATTTTTTTACAAAAACGAGTTCTCGATAAAAA
CGATTGGAAAGTCATCACTCAAACGTACTGTGATAAACAACGTGTCCGAG
ATCATGAAATTAAACGTTTGAAAAACTCTCATGTGGGTAGGAACTACAGG
AAACTGATCGAAAAATCTGATGGTTTTGATTTGGATGAAGACGGAGAACA
AAGTGAAAATGAAAATGGGGATGGAGTTGAAGAGGAAAGAGATGAAAAAG
GAGATGAAAAAGGGGATGGAAGTGACGAGGATGAAGATGAAAAAGGAGAT
CAGAGTAATGAAGAAGAGAAAGTAGAGGAAGGAGATGAAAAAGGGGATGG
AAGTGACGAGGATGAAGATGAAAAAGGAGATCAGAGTAATGAGGAAGAGC
AAGTAGAGGAAGGAGATGAAAAAGGGGATGGAAGTGACGAGTTTGAAGAT
GAAAAAGCAGATCAAAGTAATGAGGAAGAGCAAGTAGAGGAAGGAGATGA
AAACGGAGATCAAAGTGACGAGTTTGAAGATGAAAAAGGAGATCAAAGTA
ACGAAGAAAAGCAAGTAGAGGAAGGAGATGAAAAAGGAGATGGAAGTGAC
GAGTTTGAAGATGAAAAAGGAGATCAAAGTAATGAGGAAGAACAAGTAGA
GGTAGATGAAAAAGGAGATGAAAGTGACGAGGAAGACCAAGAAGAAGATG
AAGCTAGATTTGGCAACTTAATGAATGCGGTGGTTCTTGATGACAAGGAA
GGCTATTACGAACATCGAAGATCCTTTGCTATCGATTTGATAAAATCCGT
TGTTACAAATATAACTAAGGAATCAATTGACTTGGTTTTTCCTAGAAACA
AAACTCCATCAGGCAAAATCAAAAAAATGACCCAGTTGAATACTCAAGGG
AGGAAGTCGCCACACTCTATCATCGAGGAAGAAAGCGAGGATCCCCAAGA
TGTAAGTTTTTTTAATGAAGTTGGTTTGGATCATTCAACGGCGGAGAGCT
TGGCAAACAAGAAACTAACAAAAACCAAATTCTTCACGAGAGATTTCCAT
GGAAAGAAAGCTTCTTATATGATAACTCCTGAATTTAGGAAAATTCCAAT
TATTTGTGACCGGAAAACACTCAAGAGAAGACGTGGAGGAAACTGGGTCG
ACATCACTCTAAAACTTATTAAGGAAGCAAACCCGTTCTGTTCTTGGAAG
TTCACTTACAACCACATCAGAAAAAATAAAACAAACAAAAAAAATTCAAG
TTACTGGGTGGCAAAAGCAAAATGTACATTTGTTGATTGCAATTGTCGTG
TTGAAATAACCCAAGAAGATAAAGAATCTCTGGAGCTTGTTTTCCATTTT
ATTGGCGACATAAACCACAATGTTACTAAGCCTAAATCAAGGAAAATTAA
CGGCGAAGCTCGAAAGCAAGTAAAATCAAAATTTTTGAAAGAGCCGAACC
ACAGTGCTGCCGGGAATTACCGCAAGAGTCTCGCATCCATTCCAAGTGAT
GTTTTTGCTTCAGGAAATAGAGACCGTGTGGGAACTTCCAAAAAAGTTCA
CCAAAAAATCCGATCAGAAGTTAATATTGAGCTGAACGGAATCAATAATC
TCCACAAAAACCTTTGTGATCTACAGAGGAGATTGGCAGAAGATGACAAG
TCAATGTCGCAAAAGTTAGACCTGAAATTCAGAAAGATATTTGGATTCAT
TCAACGATTCATTGTAACTGATACTGAATTCAAATTGGTTATGTTTGAAG
AGAAGCATGTCAGATTGTACCATAATACTGCAAAACGAGATATTATCTAC
CTAGACGCAACCGGAGGAATCGTTAAAAAAATCAAAGCTTTCAAGAAAAT
CTTTATGTATGCATTGACAATGCGGCATCCTTTCGGGAAAACAGTTGCAC
TGCCTGCCCTGAGTTATCTCACATCAAGCCATTCCATGGAGTCTGTAAGG
TTTTCCTTAATGGCACTCAGGGAAAACGAGAGGCAAGTTTTTGGCGAATG
CTCCCAACCCAAATTAGTCATATTGGATAATAGTAAAGTTCTCCAAGGGG
CTATTCTACGAGAATTCAACAATGAGTCCATAACAGATTATGTAAACAGA
GTATTTGACACATTAACGCTATCGAGTAGTCAACGGTCAACTCTCACAAA
GATACTAACAGATATCTTTTCGTGCAGTGGTCACCTGTTGAAACAGGTAA
AAAGAGCTGTCTCGAAAAAGTGCGCGACAATCAAAGATTTCATTCTTTTC
AGTATTGGAAGGATGATTGTGTGCGAAAAATTGGAGGAATTGACTACAAT
CATCACTTTGTTTTCATCGATTCTCACAACAAGGTTCTCCAGTGATGGTC
TTCGTGATGCTGTCAAAATGATGGAAAATTACATCAACCAATTTGATGGT
CACGATTTGGTTGAAGATGTACTGTCAGACCAAAATGATAAGGATGATGA
GTTGGAAAGTGAGGAGGACGATGATGATGATGAAGAAGAAGATGTTGAAA
AAGATCATGGAGAAGTTGAAGAAAAAGATGGTAACGAAAAGAAAACAAAG
GCGAATGCAAAGACAGAAAAGACAaagacaaaaaagaagaaaaaagaaaa
caaatggaCAACTTATTGGACTGACCAGATTGACAAATCAAGACGTAAAT
ATGAATGGGTGGGGGAAGATATAAATGAAGCACCAATCAATGAATACTAT
TCTCCAaccttttttgagtattttaagAAGAATCTTTTAAATATTACTCC
CATCTGGACACGGATTTGGATCAGCGAAAGAAACCCTGATACATTAAAGG
GTCGATCGACTAAAGACCAAAACTCCACAAACGCCACcgttgaaaacttt
ttcaaatatgtAAAAAGTGAGCATGATACATCTTTGCCCATCGTATCATT
TGTGAAAAAGTATCATGAAAGTTTGAATAACTTGTCCGTTGAATTCCTAG
AAGGCATAGTTCAAGGGTGTGGAAATGTCGgagagaaagaagaaaaaatt
atcaGAATTTTTCGGGATGAAGTAGAGGATAACCCTGTTTCCATCGATAC
TGAGAAATGGAGTAAAAGGCGGAAAAGAAAACCAGGCAATAAATACCTTA
GACCAAAGAAGAAAGCCAAATTAATCACTTCTACACAAAAAGGTAAGGCT
GAATCTGACGAGATGTCTGACACAGATGATGAAAATGAGGAAATAGAAGA
AGAAAGGAACGAAATTGGCAATAACAACGAGGATGATGAAATAGAATTGG
AAGAGGAAGTAAAAAAGGAAAAGTGGTTTGAAACAAGAGAGCTGAAAACT
GCAAGGAAGAGCTGGCACGATTTCACAGAAAAGGAGAAAGAGATGATGAA
TGAGAGTGGTCAACAAGGTTGCTGTTCAAGCGATATTCGGGGAGTGAACA
TGGTTGCGTGTGAATTTTGTGAGAAGTGGTTCCATGAATGTTGCTTAAAT
TTCGACTTTCAATTTTTGCAGCTTGTTGATTACATATGCTATGATTGTTT
CAAAAGTAATACAACTGGGATTGctaactttttcttttatcactTCAAAA
AGAATCCAGATCTTGATCAGCATGGTTGTGAAATGCATTGGAATACTCTG
TCGGAGGAACACAAAAAGTCTTTTGGGGACCATATATTTCTAACGAAAAA
GCTGTTGATTACTGACAAAATCATTGTGCAGAGTAAAATAGGCATAGTGA
ACAAAAAACTAAACTGCTGGTTCTCGTCCGTTTTGCACTCACTTTTTGGG
TCAAGTGCAAGTTGTCTTTTTGGTTCATCAAATCAAAGTTTATTGAGGAT
CCAGGAAATGTTGAGAACTCAGCCAACAGCAAAAGTCCCTGCAATCAACT
TGATGAGAGAGTACAAAGCGATGAGCGACGACCTTGGGATTGATGTCAAC
TCGAACCGTAATCAAGATCCTTCTGACCTGGCCTTTGCTATCATTCGAAG
ATTACCACTGGCACTTGATTTCAAGATCAGGGCACTTGTCATCCACAATT
GCTCAAAATGTCAGCAGATTTTAAAGATTGACTCACGTACAGAAGAAGAA
TCTTTGGATTTAACGGTACCAGCAAATTATCAACATTCAATTAAACTGAC
TGATTTGGTGTGGTACAATTTAGGTGGATGGAAAAGCTATGATCATGACG
ATATATTGGAAAGATGCTTGTGCAAATCAAATGAGATTTCTACTTTTGTC
ACCTTACTAGACTCTCCAATTTATATTGTATTGAAGTTTAGTCGCATCAA
GTATGTAAATAAGCAAGTCCATCTCGCAAAAACAAAGATATTGTTAGAGC
ATGAAATCGATCTTGGTGAATTTTCCCCTGCCTTCCAAACAGATTCAAAG
TATCTCTTGGTGTCTTCCGTAAACTATGCTGGTGGTCAGGATAGTGTTTT
CTCAAATCATTTTACAGCCACCCTGTTCGACCATGAAAAAGGAAAAGCCG
TATGGTTCGATGATAACACTGTGAAGCGTTTTACAACCGAAAAGTGGCTG
AAAAATGAAAGCTTTCAAAAGTCAGTCTTTTATGCCATCTATATCAAGAA
ATCCTCTATTGGTGAAAACAAAAGTTTTGACTATCCTTGGAACCTTGATG
AAGAAAAGATTTTCCTAACAGAAAAAGTCATGTTTGGCGATTTAACACCA
TCAAATATTACACCAACAAGCTCCTTGTTATCATGCTCCGGTAAAAATCT
CGTTACTGGCGATATCATTTTTACTTTTGTTAAAGCTGTCGCAAGCAATT
ATCCCTCTGTTAAAGTTGTTTCATCAGATGTCATAACTAATGCAAGAAGT
TGCTCCCAAAATGTCGAGTTCCAGGTACTTCAAAGTGAAGGTATTTCCTT
GTGTAACCTGGTAATCATAATCCATCATACACCTCCTGGACATTGGTCCA
TTATCGGGATTTATCCAAAACAAAAAATGATTTTCCACTTGAATTCAATT
GCCACTAAATCTGAGGAACCGTTTCAAGTGGCACTTTATATTGTTGAGAA
GGTGTATGAGACACAAAGAGAACATTTTTTCTTTGCTCAGTGGCAGCTTT
ATCAACCTGTCAAGGTTCCACAACAAAAAGACACGGTCAACTGCGGAGTA
TTTGCATGTCTTAATGCCTACAATTTGATCGAAAGGACAACCTTTTCAGG
TTTGGAGGATGACCCAGCGTGTATGCGGTATTGGATCGCATCTACTTGTC
TTAATGCAGAAATTCATTTGCCTGAACGTACCAATTTTAAGACCAAATCG
ATTGATCCTCCTGAAAAGTTCGATCACCTAATCATCGACCGACACCTCAA
AACATGTAGATCACCGAACATATTTGACAAAATCTTTGAGACTGTGGAGA
CTTATGTGCTATCGGATGATTCAGACAAAAATTCTAGTAGCTCCTCAAAT
GAAGTACAATACGAGGAAGAAGTAAAACTACCATACGAGCTAGATCAATA
CCTTGAATCAGGAGCTTACAAGGCACAATTAGAGGAAGTTTTTCGGACCC
CGTTGAATGTCAATCAGTATGACATTGTCGTCTTTTACTCAGTGAGCTCA
AGATCTCAAATAAAGGAGGCATTCTCGCAAGTTGATTTCAACTATGTAAT
GTCTTTCAAGATGCGATGTGAAATTGGGCTCATACTGATGAGAAAAATGA
ACGGTACCAGCTTTGGAATACCTATGAGACATACTACTGCAGATTTCTAT
TTGGAGATTGTTTGTCCCGTCCTCCTTTGCCTTTTTTATAAAGGcacaaa
gaaaatcaatttattGGAAGCAGAACGATTGGTCGCTCCAGGGTACCCCT
ATCATGTCTTGCTTCTGTCACAGGTATTCAAACTttcttgaattttcttt
ttcttttttttaaatcttttttctgttttgaatgTTACAGTACTCTCAAT
TACTTGAAACAGAACCTTAAGGAAATGCAGTTTCTTAtgaaatttttcct
aaaaaaagcTGAGAAGCattaaaaatgcaattttcagcCCCACTATTATT
GCATAATAGAAGAGTAGAAAATAACACCTGTTAAGTTACTTTTGACTAAT
CTCGTTTTTATATGTTGTTTAACAGAGTACAAAACACAGTAGCTTTTTGG
CGAATACAgtgataaacaaaagaactgttCAAATTGTGAAAGGTCAGTGT
TCAAGCCAAAGGACCCACGCCATCGTTTATCTTGGATCCCCAGC Run BLAST on NCBI protein sequence of TCONS_00043590-protein >TCONS_00043590-protein ID=TCONS_00043590-protein|Name=TCONS_00043590-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1706bp
MNAVVLDDKEGYYEHRRSFAIDLIKSVVTNITKESIDLVFPRNKTPSGKI
KKMTQLNTQGRKSPHSIIEEESEDPQDVSFFNEVGLDHSTAESLANKKLT
KTKFFTRDFHGKKASYMITPEFRKIPIICDRKTLKRRRGGNWVDITLKLI
KEANPFCSWKFTYNHIRKNKTNKKNSSYWVAKAKCTFVDCNCRVEITQED
KESLELVFHFIGDINHNVTKPKSRKINGEARKQVKSKFLKEPNHSAAGNY
RKSLASIPSDVFASGNRDRVGTSKKVHQKIRSEVNIELNGINNLHKNLCD
LQRRLAEDDKSMSQKLDLKFRKIFGFIQRFIVTDTEFKLVMFEEKHVRLY
HNTAKRDIIYLDATGGIVKKIKAFKKIFMYALTMRHPFGKTVALPALSYL
TSSHSMESVRFSLMALRENERQVFGECSQPKLVILDNSKVLQGAILREFN
NESITDYVNRVFDTLTLSSSQRSTLTKILTDIFSCSGHLLKQVKRAVSKK
CATIKDFILFSIGRMIVCEKLEELTTIITLFSSILTTRFSSDGLRDAVKM
MENYINQFDGHDLVEDVLSDQNDKDDELESEEDDDDDEEEDVEKDHGEVE
EKDGNEKKTKANAKTEKTKTKKKKKENKWTTYWTDQIDKSRRKYEWVGED
INEAPINEYYSPTFFEYFKKNLLNITPIWTRIWISERNPDTLKGRSTKDQ
NSTNATVENFFKYVKSEHDTSLPIVSFVKKYHESLNNLSVEFLEGIVQGC
GNVGEKEEKIIRIFRDEVEDNPVSIDTEKWSKRRKRKPGNKYLRPKKKAK
LITSTQKGKAESDEMSDTDDENEEIEEERNEIGNNNEDDEIELEEEVKKE
KWFETRELKTARKSWHDFTEKEKEMMNESGQQGCCSSDIRGVNMVACEFC
EKWFHECCLNFDFQFLQLVDYICYDCFKSNTTGIANFFFYHFKKNPDLDQ
HGCEMHWNTLSEEHKKSFGDHIFLTKKLLITDKIIVQSKIGIVNKKLNCW
FSSVLHSLFGSSASCLFGSSNQSLLRIQEMLRTQPTAKVPAINLMREYKA
MSDDLGIDVNSNRNQDPSDLAFAIIRRLPLALDFKIRALVIHNCSKCQQI
LKIDSRTEEESLDLTVPANYQHSIKLTDLVWYNLGGWKSYDHDDILERCL
CKSNEISTFVTLLDSPIYIVLKFSRIKYVNKQVHLAKTKILLEHEIDLGE
FSPAFQTDSKYLLVSSVNYAGGQDSVFSNHFTATLFDHEKGKAVWFDDNT
VKRFTTEKWLKNESFQKSVFYAIYIKKSSIGENKSFDYPWNLDEEKIFLT
EKVMFGDLTPSNITPTSSLLSCSGKNLVTGDIIFTFVKAVASNYPSVKVV
SSDVITNARSCSQNVEFQVLQSEGISLCNLVIIIHHTPPGHWSIIGIYPK
QKMIFHLNSIATKSEEPFQVALYIVEKVYETQREHFFFAQWQLYQPVKVP
QQKDTVNCGVFACLNAYNLIERTTFSGLEDDPACMRYWIASTCLNAEIHL
PERTNFKTKSIDPPEKFDHLIIDRHLKTCRSPNIFDKIFETVETYVLSDD
SDKNSSSSSNEVQYEEEVKLPYELDQYLESGAYKAQLEEVFRTPLNVNQY
DIVVFYSVSSRSQIKEAFSQVDFNYVMSFKMRCEIGLILMRKMNGTSFGI
PMRHTTADFYLEIVCPVLLCLFYKGTKKINLLEAERLVAPGYPYHVLLLS
QVFKLS Run BLAST on NCBI transcript from alignment at sc0004373:24..7183+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043590 ID=TCONS_00043590|Name=TCONS_00043590|organism=Clytia hemisphaerica|type=transcript|length=7160bp|location=Sequence derived from alignment at sc0004373:24..7183+ (Clytia hemisphaerica)
CTCGCAATATGTGAACAATCAATCGACGGTTCCAACACCAAGAGGAGGAC
AGAATGATGTTTCTTCAATAACAATAACAAGATGAGGACAGAACGATGTT
TCAGCAACAACAAAAGGAGGGCAGAATGATGTTTCAGCAACAACAGGACG
TAGAAGAGATgatatttcaacaacaagatgAAGACTGAATGATGTTTCGA
CAACAACATCAAGAAGAGGGCAGAGTggtgtttcaacaacaagaggAGGG
CAGGGTGATGTTTGAATAGTGATTCTCTTATTTCCAATCAATACCTACCC
CAACCGTTAATCGATACCGAGCCCAACTACCAATCGATACCGACTTCAAC
TTCAAATCGATAATGACCCCAAGTTCCAATCATTACCGACGCCATCATCC
ATTTCCATATTTGTGGATGACTTAAAATTGATTCACaatttccttgaaat
ttatACTTTTAGTCAAAATCAGCTATGCTAAATTTAGCTGAAAAATGCTA
TTAAAATTCATCTTCTTTTCTTCACTGTAAGGCTGTAAGTGATAAGTTTT
CAATAAACAGGTTTAGAACACTGAAAAGCTCTAGAACTGAACttaatatt
ttctatttttcaaattttagccaTTGACCAGTCAAACTTGATTAAGCGTG
GTCGACCGAAAAAAGGAAGGAAAATATCGATCGATAACGATTTGTTACTG
GAAATACTAAGATCCGAAATTTTTTTACAAAAACGAGTTCTCGATAAAAA
CGATTGGAAAGTCATCACTCAAACGTACTGTGATAAACAACGTGTCCGAG
ATCATGAAATTAAACGTTTGAAAAACTCTCATGTGGGTAGGAACTACAGG
AAACTGATCGAAAAATCTGATGGTTTTGATTTGGATGAAGACGGAGAACA
AAGTGAAAATGAAAATGGGGATGGAGTTGAAGAGGAAAGAGATGAAAAAG
GAGATGAAAAAGGGGATGGAAGTGACGAGGATGAAGATGAAAAAGGAGAT
CAGAGTAATGAAGAAGAGAAAGTAGAGGAAGGAGATGAAAAAGGGGATGG
AAGTGACGAGGATGAAGATGAAAAAGGAGATCAGAGTAATGAGGAAGAGC
AAGTAGAGGAAGGAGATGAAAAAGGGGATGGAAGTGACGAGTTTGAAGAT
GAAAAAGCAGATCAAAGTAATGAGGAAGAGCAAGTAGAGGAAGGAGATGA
AAACGGAGATCAAAGTGACGAGTTTGAAGATGAAAAAGGAGATCAAAGTA
ACGAAGAAAAGCAAGTAGAGGAAGGAGATGAAAAAGGAGATGGAAGTGAC
GAGTTTGAAGATGAAAAAGGAGATCAAAGTAATGAGGAAGAACAAGTAGA
GGTAGATGAAAAAGGAGATGAAAGTGACGAGGAAGACCAAGAAGAAGATG
AAGCTAGATTTGGCAACTTAATGAATGCGGTGGTTCTTGATGACAAGGAA
GGCTATTACGAACATCGAAGATCCTTTGCTATCGATTTGATAAAATCCGT
TGTTACAAATATAACTAAGGAATCAATTGACTTGGTTTTTCCTAGAAACA
AAACTCCATCAGGCAAAATCAAAAAAATGACCCAGTTGAATACTCAAGGG
AGGAAGTCGCCACACTCTATCATCGAGGAAGAAAGCGAGGATCCCCAAGA
TGTAAGTTTTTTTAATGAAGTTGGTTTGGATCATTCAACGGCGGAGAGCT
TGGCAAACAAGAAACTAACAAAAACCAAATTCTTCACGAGAGATTTCCAT
GGAAAGAAAGCTTCTTATATGATAACTCCTGAATTTAGGAAAATTCCAAT
TATTTGTGACCGGAAAACACTCAAGAGAAGACGTGGAGGAAACTGGGTCG
ACATCACTCTAAAACTTATTAAGGAAGCAAACCCGTTCTGTTCTTGGAAG
TTCACTTACAACCACATCAGAAAAAATAAAACAAACAAAAAAAATTCAAG
TTACTGGGTGGCAAAAGCAAAATGTACATTTGTTGATTGCAATTGTCGTG
TTGAAATAACCCAAGAAGATAAAGAATCTCTGGAGCTTGTTTTCCATTTT
ATTGGCGACATAAACCACAATGTTACTAAGCCTAAATCAAGGAAAATTAA
CGGCGAAGCTCGAAAGCAAGTAAAATCAAAATTTTTGAAAGAGCCGAACC
ACAGTGCTGCCGGGAATTACCGCAAGAGTCTCGCATCCATTCCAAGTGAT
GTTTTTGCTTCAGGAAATAGAGACCGTGTGGGAACTTCCAAAAAAGTTCA
CCAAAAAATCCGATCAGAAGTTAATATTGAGCTGAACGGAATCAATAATC
TCCACAAAAACCTTTGTGATCTACAGAGGAGATTGGCAGAAGATGACAAG
TCAATGTCGCAAAAGTTAGACCTGAAATTCAGAAAGATATTTGGATTCAT
TCAACGATTCATTGTAACTGATACTGAATTCAAATTGGTTATGTTTGAAG
AGAAGCATGTCAGATTGTACCATAATACTGCAAAACGAGATATTATCTAC
CTAGACGCAACCGGAGGAATCGTTAAAAAAATCAAAGCTTTCAAGAAAAT
CTTTATGTATGCATTGACAATGCGGCATCCTTTCGGGAAAACAGTTGCAC
TGCCTGCCCTGAGTTATCTCACATCAAGCCATTCCATGGAGTCTGTAAGG
TTTTCCTTAATGGCACTCAGGGAAAACGAGAGGCAAGTTTTTGGCGAATG
CTCCCAACCCAAATTAGTCATATTGGATAATAGTAAAGTTCTCCAAGGGG
CTATTCTACGAGAATTCAACAATGAGTCCATAACAGATTATGTAAACAGA
GTATTTGACACATTAACGCTATCGAGTAGTCAACGGTCAACTCTCACAAA
GATACTAACAGATATCTTTTCGTGCAGTGGTCACCTGTTGAAACAGGTAA
AAAGAGCTGTCTCGAAAAAGTGCGCGACAATCAAAGATTTCATTCTTTTC
AGTATTGGAAGGATGATTGTGTGCGAAAAATTGGAGGAATTGACTACAAT
CATCACTTTGTTTTCATCGATTCTCACAACAAGGTTCTCCAGTGATGGTC
TTCGTGATGCTGTCAAAATGATGGAAAATTACATCAACCAATTTGATGGT
CACGATTTGGTTGAAGATGTACTGTCAGACCAAAATGATAAGGATGATGA
GTTGGAAAGTGAGGAGGACGATGATGATGATGAAGAAGAAGATGTTGAAA
AAGATCATGGAGAAGTTGAAGAAAAAGATGGTAACGAAAAGAAAACAAAG
GCGAATGCAAAGACAGAAAAGACAaagacaaaaaagaagaaaaaagaaaa
caaatggaCAACTTATTGGACTGACCAGATTGACAAATCAAGACGTAAAT
ATGAATGGGTGGGGGAAGATATAAATGAAGCACCAATCAATGAATACTAT
TCTCCAaccttttttgagtattttaagAAGAATCTTTTAAATATTACTCC
CATCTGGACACGGATTTGGATCAGCGAAAGAAACCCTGATACATTAAAGG
GTCGATCGACTAAAGACCAAAACTCCACAAACGCCACcgttgaaaacttt
ttcaaatatgtAAAAAGTGAGCATGATACATCTTTGCCCATCGTATCATT
TGTGAAAAAGTATCATGAAAGTTTGAATAACTTGTCCGTTGAATTCCTAG
AAGGCATAGTTCAAGGGTGTGGAAATGTCGgagagaaagaagaaaaaatt
atcaGAATTTTTCGGGATGAAGTAGAGGATAACCCTGTTTCCATCGATAC
TGAGAAATGGAGTAAAAGGCGGAAAAGAAAACCAGGCAATAAATACCTTA
GACCAAAGAAGAAAGCCAAATTAATCACTTCTACACAAAAAGGTAAGGCT
GAATCTGACGAGATGTCTGACACAGATGATGAAAATGAGGAAATAGAAGA
AGAAAGGAACGAAATTGGCAATAACAACGAGGATGATGAAATAGAATTGG
AAGAGGAAGTAAAAAAGGAAAAGTGGTTTGAAACAAGAGAGCTGAAAACT
GCAAGGAAGAGCTGGCACGATTTCACAGAAAAGGAGAAAGAGATGATGAA
TGAGAGTGGTCAACAAGGTTGCTGTTCAAGCGATATTCGGGGAGTGAACA
TGGTTGCGTGTGAATTTTGTGAGAAGTGGTTCCATGAATGTTGCTTAAAT
TTCGACTTTCAATTTTTGCAGCTTGTTGATTACATATGCTATGATTGTTT
CAAAAGTAATACAACTGGGATTGctaactttttcttttatcactTCAAAA
AGAATCCAGATCTTGATCAGCATGGTTGTGAAATGCATTGGAATACTCTG
TCGGAGGAACACAAAAAGTCTTTTGGGGACCATATATTTCTAACGAAAAA
GCTGTTGATTACTGACAAAATCATTGTGCAGAGTAAAATAGGCATAGTGA
ACAAAAAACTAAACTGCTGGTTCTCGTCCGTTTTGCACTCACTTTTTGGG
TCAAGTGCAAGTTGTCTTTTTGGTTCATCAAATCAAAGTTTATTGAGGAT
CCAGGAAATGTTGAGAACTCAGCCAACAGCAAAAGTCCCTGCAATCAACT
TGATGAGAGAGTACAAAGCGATGAGCGACGACCTTGGGATTGATGTCAAC
TCGAACCGTAATCAAGATCCTTCTGACCTGGCCTTTGCTATCATTCGAAG
ATTACCACTGGCACTTGATTTCAAGATCAGGGCACTTGTCATCCACAATT
GCTCAAAATGTCAGCAGATTTTAAAGATTGACTCACGTACAGAAGAAGAA
TCTTTGGATTTAACGGTACCAGCAAATTATCAACATTCAATTAAACTGAC
TGATTTGGTGTGGTACAATTTAGGTGGATGGAAAAGCTATGATCATGACG
ATATATTGGAAAGATGCTTGTGCAAATCAAATGAGATTTCTACTTTTGTC
ACCTTACTAGACTCTCCAATTTATATTGTATTGAAGTTTAGTCGCATCAA
GTATGTAAATAAGCAAGTCCATCTCGCAAAAACAAAGATATTGTTAGAGC
ATGAAATCGATCTTGGTGAATTTTCCCCTGCCTTCCAAACAGATTCAAAG
TATCTCTTGGTGTCTTCCGTAAACTATGCTGGTGGTCAGGATAGTGTTTT
CTCAAATCATTTTACAGCCACCCTGTTCGACCATGAAAAAGGAAAAGCCG
TATGGTTCGATGATAACACTGTGAAGCGTTTTACAACCGAAAAGTGGCTG
AAAAATGAAAGCTTTCAAAAGTCAGTCTTTTATGCCATCTATATCAAGAA
ATCCTCTATTGGTGAAAACAAAAGTTTTGACTATCCTTGGAACCTTGATG
AAGAAAAGATTTTCCTAACAGAAAAAGTCATGTTTGGCGATTTAACACCA
TCAAATATTACACCAACAAGCTCCTTGTTATCATGCTCCGGTAAAAATCT
CGTTACTGGCGATATCATTTTTACTTTTGTTAAAGCTGTCGCAAGCAATT
ATCCCTCTGTTAAAGTTGTTTCATCAGATGTCATAACTAATGCAAGAAGT
TGCTCCCAAAATGTCGAGTTCCAGGTACTTCAAAGTGAAGGTATTTCCTT
GTGTAACCTGGTAATCATAATCCATCATACACCTCCTGGACATTGGTCCA
TTATCGGGATTTATCCAAAACAAAAAATGATTTTCCACTTGAATTCAATT
GCCACTAAATCTGAGGAACCGTTTCAAGTGGCACTTTATATTGTTGAGAA
GGTGTATGAGACACAAAGAGAACATTTTTTCTTTGCTCAGTGGCAGCTTT
ATCAACCTGTCAAGGTTCCACAACAAAAAGACACGGTCAACTGCGGAGTA
TTTGCATGTCTTAATGCCTACAATTTGATCGAAAGGACAACCTTTTCAGG
TTTGGAGGATGACCCAGCGTGTATGCGGTATTGGATCGCATCTACTTGTC
TTAATGCAGAAATTCATTTGCCTGAACGTACCAATTTTAAGACCAAATCG
ATTGATCCTCCTGAAAAGTTCGATCACCTAATCATCGACCGACACCTCAA
AACATGTAGATCACCGAACATATTTGACAAAATCTTTGAGACTGTGGAGA
CTTATGTGCTATCGGATGATTCAGACAAAAATTCTAGTAGCTCCTCAAAT
GAAGTACAATACGAGGAAGAAGTAAAACTACCATACGAGCTAGATCAATA
CCTTGAATCAGGAGCTTACAAGGCACAATTAGAGGAAGTTTTTCGGACCC
CGTTGAATGTCAATCAGTATGACATTGTCGTCTTTTACTCAGTGAGCTCA
AGATCTCAAATAAAGGAGGCATTCTCGCAAGTTGATTTCAACTATGTAAT
GTCTTTCAAGATGCGATGTGAAATTGGGCTCATACTGATGAGAAAAATGA
ACGGTACCAGCTTTGGAATACCTATGAGACATACTACTGCAGATTTCTAT
TTGGAGATTGTTTGTCCCGTCCTCCTTTGCCTTTTTTATAAAGGcacaaa
gaaaatcaatttattGGAAGCAGAACGATTGGTCGCTCCAGGGTACCCCT
ATCATGTCTTGCTTCTGTCACAGGTATTCAAACTttcttgaattttcttt
ttcttttttttaaatcttttttctgttttgaatgTTACAGTACTCTCAAT
TACTTGAAACAGAACCTTAAGGAAATGCAGTTTCTTAtgaaatttttcct
aaaaaaagcTGAGAAGCattaaaaatgcaattttcagcCCCACTATTATT
GCATAATAGAAGAGTAGAAAATAACACCTGTTAAGTTACTTTTGACTAAT
CTCGTTTTTATATGTTGTTTAACAGAGTACAAAACACAGTAGCTTTTTGG
CGAATACAgtgataaacaaaagaactgttCAAAGTAGGTACCCTTTTCTT
CGCCGTAATTATTTCTAGCCAAAATAAACCCTGAAATTCCACAAAATCAC
TCAAAATAAAGAACCTTAGCCTTACATTCTCCATAACTTTGCACTTGTAC
TTAATCTctctattttattattttgataaatttaaaaGTACGAAAGTTCG
TGAAATTAGTAGAAGTTCGCTAAATTAAGTACCCACGAATATTTTTGATA
ATCAAGGTTAAATCCCACGATGGCATATTTTAAATCTTTTACATTGTAGT
TGTGAAAGGTCAGTGTTCAAGCCAAAGGACCCACGCCATCGTTTATCTTG
GATCCCCAGC Coding sequence (CDS) from alignment at sc0004373:24..7183+ >TCONS_00043590 ID=TCONS_00043590|Name=TCONS_00043590|organism=Clytia hemisphaerica|type=CDS|length=5121bp|location=Sequence derived from alignment at sc0004373:24..7183+ (Clytia hemisphaerica)
ATGAATGCGGTGGTTCTTGATGACAAGGAAGGCTATTACGAACATCGAAG
ATCCTTTGCTATCGATTTGATAAAATCCGTTGTTACAAATATAACTAAGG
AATCAATTGACTTGGTTTTTCCTAGAAACAAAACTCCATCAGGCAAAATC
AAAAAAATGACCCAGTTGAATACTCAAGGGAGGAAGTCGCCACACTCTAT
CATCGAGGAAGAAAGCGAGGATCCCCAAGATGTAAGTTTTTTTAATGAAG
TTGGTTTGGATCATTCAACGGCGGAGAGCTTGGCAAACAAGAAACTAACA
AAAACCAAATTCTTCACGAGAGATTTCCATGGAAAGAAAGCTTCTTATAT
GATAACTCCTGAATTTAGGAAAATTCCAATTATTTGTGACCGGAAAACAC
TCAAGAGAAGACGTGGAGGAAACTGGGTCGACATCACTCTAAAACTTATT
AAGGAAGCAAACCCGTTCTGTTCTTGGAAGTTCACTTACAACCACATCAG
AAAAAATAAAACAAACAAAAAAAATTCAAGTTACTGGGTGGCAAAAGCAA
AATGTACATTTGTTGATTGCAATTGTCGTGTTGAAATAACCCAAGAAGAT
AAAGAATCTCTGGAGCTTGTTTTCCATTTTATTGGCGACATAAACCACAA
TGTTACTAAGCCTAAATCAAGGAAAATTAACGGCGAAGCTCGAAAGCAAG
TAAAATCAAAATTTTTGAAAGAGCCGAACCACAGTGCTGCCGGGAATTAC
CGCAAGAGTCTCGCATCCATTCCAAGTGATGTTTTTGCTTCAGGAAATAG
AGACCGTGTGGGAACTTCCAAAAAAGTTCACCAAAAAATCCGATCAGAAG
TTAATATTGAGCTGAACGGAATCAATAATCTCCACAAAAACCTTTGTGAT
CTACAGAGGAGATTGGCAGAAGATGACAAGTCAATGTCGCAAAAGTTAGA
CCTGAAATTCAGAAAGATATTTGGATTCATTCAACGATTCATTGTAACTG
ATACTGAATTCAAATTGGTTATGTTTGAAGAGAAGCATGTCAGATTGTAC
CATAATACTGCAAAACGAGATATTATCTACCTAGACGCAACCGGAGGAAT
CGTTAAAAAAATCAAAGCTTTCAAGAAAATCTTTATGTATGCATTGACAA
TGCGGCATCCTTTCGGGAAAACAGTTGCACTGCCTGCCCTGAGTTATCTC
ACATCAAGCCATTCCATGGAGTCTGTAAGGTTTTCCTTAATGGCACTCAG
GGAAAACGAGAGGCAAGTTTTTGGCGAATGCTCCCAACCCAAATTAGTCA
TATTGGATAATAGTAAAGTTCTCCAAGGGGCTATTCTACGAGAATTCAAC
AATGAGTCCATAACAGATTATGTAAACAGAGTATTTGACACATTAACGCT
ATCGAGTAGTCAACGGTCAACTCTCACAAAGATACTAACAGATATCTTTT
CGTGCAGTGGTCACCTGTTGAAACAGGTAAAAAGAGCTGTCTCGAAAAAG
TGCGCGACAATCAAAGATTTCATTCTTTTCAGTATTGGAAGGATGATTGT
GTGCGAAAAATTGGAGGAATTGACTACAATCATCACTTTGTTTTCATCGA
TTCTCACAACAAGGTTCTCCAGTGATGGTCTTCGTGATGCTGTCAAAATG
ATGGAAAATTACATCAACCAATTTGATGGTCACGATTTGGTTGAAGATGT
ACTGTCAGACCAAAATGATAAGGATGATGAGTTGGAAAGTGAGGAGGACG
ATGATGATGATGAAGAAGAAGATGTTGAAAAAGATCATGGAGAAGTTGAA
GAAAAAGATGGTAACGAAAAGAAAACAAAGGCGAATGCAAAGACAGAAAA
GACAaagacaaaaaagaagaaaaaagaaaacaaatggaCAACTTATTGGA
CTGACCAGATTGACAAATCAAGACGTAAATATGAATGGGTGGGGGAAGAT
ATAAATGAAGCACCAATCAATGAATACTATTCTCCAaccttttttgagta
ttttaagAAGAATCTTTTAAATATTACTCCCATCTGGACACGGATTTGGA
TCAGCGAAAGAAACCCTGATACATTAAAGGGTCGATCGACTAAAGACCAA
AACTCCACAAACGCCACcgttgaaaactttttcaaatatgtAAAAAGTGA
GCATGATACATCTTTGCCCATCGTATCATTTGTGAAAAAGTATCATGAAA
GTTTGAATAACTTGTCCGTTGAATTCCTAGAAGGCATAGTTCAAGGGTGT
GGAAATGTCGgagagaaagaagaaaaaattatcaGAATTTTTCGGGATGA
AGTAGAGGATAACCCTGTTTCCATCGATACTGAGAAATGGAGTAAAAGGC
GGAAAAGAAAACCAGGCAATAAATACCTTAGACCAAAGAAGAAAGCCAAA
TTAATCACTTCTACACAAAAAGGTAAGGCTGAATCTGACGAGATGTCTGA
CACAGATGATGAAAATGAGGAAATAGAAGAAGAAAGGAACGAAATTGGCA
ATAACAACGAGGATGATGAAATAGAATTGGAAGAGGAAGTAAAAAAGGAA
AAGTGGTTTGAAACAAGAGAGCTGAAAACTGCAAGGAAGAGCTGGCACGA
TTTCACAGAAAAGGAGAAAGAGATGATGAATGAGAGTGGTCAACAAGGTT
GCTGTTCAAGCGATATTCGGGGAGTGAACATGGTTGCGTGTGAATTTTGT
GAGAAGTGGTTCCATGAATGTTGCTTAAATTTCGACTTTCAATTTTTGCA
GCTTGTTGATTACATATGCTATGATTGTTTCAAAAGTAATACAACTGGGA
TTGctaactttttcttttatcactTCAAAAAGAATCCAGATCTTGATCAG
CATGGTTGTGAAATGCATTGGAATACTCTGTCGGAGGAACACAAAAAGTC
TTTTGGGGACCATATATTTCTAACGAAAAAGCTGTTGATTACTGACAAAA
TCATTGTGCAGAGTAAAATAGGCATAGTGAACAAAAAACTAAACTGCTGG
TTCTCGTCCGTTTTGCACTCACTTTTTGGGTCAAGTGCAAGTTGTCTTTT
TGGTTCATCAAATCAAAGTTTATTGAGGATCCAGGAAATGTTGAGAACTC
AGCCAACAGCAAAAGTCCCTGCAATCAACTTGATGAGAGAGTACAAAGCG
ATGAGCGACGACCTTGGGATTGATGTCAACTCGAACCGTAATCAAGATCC
TTCTGACCTGGCCTTTGCTATCATTCGAAGATTACCACTGGCACTTGATT
TCAAGATCAGGGCACTTGTCATCCACAATTGCTCAAAATGTCAGCAGATT
TTAAAGATTGACTCACGTACAGAAGAAGAATCTTTGGATTTAACGGTACC
AGCAAATTATCAACATTCAATTAAACTGACTGATTTGGTGTGGTACAATT
TAGGTGGATGGAAAAGCTATGATCATGACGATATATTGGAAAGATGCTTG
TGCAAATCAAATGAGATTTCTACTTTTGTCACCTTACTAGACTCTCCAAT
TTATATTGTATTGAAGTTTAGTCGCATCAAGTATGTAAATAAGCAAGTCC
ATCTCGCAAAAACAAAGATATTGTTAGAGCATGAAATCGATCTTGGTGAA
TTTTCCCCTGCCTTCCAAACAGATTCAAAGTATCTCTTGGTGTCTTCCGT
AAACTATGCTGGTGGTCAGGATAGTGTTTTCTCAAATCATTTTACAGCCA
CCCTGTTCGACCATGAAAAAGGAAAAGCCGTATGGTTCGATGATAACACT
GTGAAGCGTTTTACAACCGAAAAGTGGCTGAAAAATGAAAGCTTTCAAAA
GTCAGTCTTTTATGCCATCTATATCAAGAAATCCTCTATTGGTGAAAACA
AAAGTTTTGACTATCCTTGGAACCTTGATGAAGAAAAGATTTTCCTAACA
GAAAAAGTCATGTTTGGCGATTTAACACCATCAAATATTACACCAACAAG
CTCCTTGTTATCATGCTCCGGTAAAAATCTCGTTACTGGCGATATCATTT
TTACTTTTGTTAAAGCTGTCGCAAGCAATTATCCCTCTGTTAAAGTTGTT
TCATCAGATGTCATAACTAATGCAAGAAGTTGCTCCCAAAATGTCGAGTT
CCAGGTACTTCAAAGTGAAGGTATTTCCTTGTGTAACCTGGTAATCATAA
TCCATCATACACCTCCTGGACATTGGTCCATTATCGGGATTTATCCAAAA
CAAAAAATGATTTTCCACTTGAATTCAATTGCCACTAAATCTGAGGAACC
GTTTCAAGTGGCACTTTATATTGTTGAGAAGGTGTATGAGACACAAAGAG
AACATTTTTTCTTTGCTCAGTGGCAGCTTTATCAACCTGTCAAGGTTCCA
CAACAAAAAGACACGGTCAACTGCGGAGTATTTGCATGTCTTAATGCCTA
CAATTTGATCGAAAGGACAACCTTTTCAGGTTTGGAGGATGACCCAGCGT
GTATGCGGTATTGGATCGCATCTACTTGTCTTAATGCAGAAATTCATTTG
CCTGAACGTACCAATTTTAAGACCAAATCGATTGATCCTCCTGAAAAGTT
CGATCACCTAATCATCGACCGACACCTCAAAACATGTAGATCACCGAACA
TATTTGACAAAATCTTTGAGACTGTGGAGACTTATGTGCTATCGGATGAT
TCAGACAAAAATTCTAGTAGCTCCTCAAATGAAGTACAATACGAGGAAGA
AGTAAAACTACCATACGAGCTAGATCAATACCTTGAATCAGGAGCTTACA
AGGCACAATTAGAGGAAGTTTTTCGGACCCCGTTGAATGTCAATCAGTAT
GACATTGTCGTCTTTTACTCAGTGAGCTCAAGATCTCAAATAAAGGAGGC
ATTCTCGCAAGTTGATTTCAACTATGTAATGTCTTTCAAGATGCGATGTG
AAATTGGGCTCATACTGATGAGAAAAATGAACGGTACCAGCTTTGGAATA
CCTATGAGACATACTACTGCAGATTTCTATTTGGAGATTGTTTGTCCCGT
CCTCCTTTGCCTTTTTTATAAAGGcacaaagaaaatcaatttattGGAAG
CAGAACGATTGGTCGCTCCAGGGTACCCCTATCATGTCTTGCTTCTGTCA
CAGGTATTCAAACTttcttga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043590-exon-sc0004373-1491911889:24..6856 | TCONS_00043590-exon-sc0004373-1491911889:24..6856 | Clytia hemisphaerica | exon |
| TCONS_00043590-exon-sc0004373-1510915933:24..6856 | TCONS_00043590-exon-sc0004373-1510915933:24..6856 | Clytia hemisphaerica | exon |
| TCONS_00043590-exon-sc0004373-1575043694:24..6856 | TCONS_00043590-exon-sc0004373-1575043694:24..6856 | Clytia hemisphaerica | exon |
| TCONS_00043590-exon-sc0004373-1491911889:7123..7183 | TCONS_00043590-exon-sc0004373-1491911889:7123..7183 | Clytia hemisphaerica | exon |
| TCONS_00043590-exon-sc0004373-1510915933:7123..7183 | TCONS_00043590-exon-sc0004373-1510915933:7123..7183 | Clytia hemisphaerica | exon |
| TCONS_00043590-exon-sc0004373-1575043694:7123..7183 | TCONS_00043590-exon-sc0004373-1575043694:7123..7183 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004373 | supercontig | sc0004373:24..7183 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006508 | proteolysis |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008234 | cysteine-type peptidase activity |
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006508 |
proteolysis |
| molecular_function |
GO:0008234 |
cysteine-type peptidase activity |
| molecular_function |
GO:0005515 |
protein binding |
Blast
The following BLAST results are available for this feature:
|
