XLOC_027277 (gene) - C. hemisphaerica

Overview
NameXLOC_027277
Unique NameXLOC_027277
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0004373:24..7183+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027277 ID=XLOC_027277|Name=XLOC_027277|organism=Clytia hemisphaerica|type=gene|length=7160bp|location=Sequence derived from alignment at sc0004373:24..7183+ (Clytia hemisphaerica)
CTCGCAATATGTGAACAATCAATCGACGGTTCCAACACCAAGAGGAGGAC AGAATGATGTTTCTTCAATAACAATAACAAGATGAGGACAGAACGATGTT TCAGCAACAACAAAAGGAGGGCAGAATGATGTTTCAGCAACAACAGGACG TAGAAGAGATgatatttcaacaacaagatgAAGACTGAATGATGTTTCGA CAACAACATCAAGAAGAGGGCAGAGTggtgtttcaacaacaagaggAGGG CAGGGTGATGTTTGAATAGTGATTCTCTTATTTCCAATCAATACCTACCC CAACCGTTAATCGATACCGAGCCCAACTACCAATCGATACCGACTTCAAC TTCAAATCGATAATGACCCCAAGTTCCAATCATTACCGACGCCATCATCC ATTTCCATATTTGTGGATGACTTAAAATTGATTCACaatttccttgaaat ttatACTTTTAGTCAAAATCAGCTATGCTAAATTTAGCTGAAAAATGCTA TTAAAATTCATCTTCTTTTCTTCACTGTAAGGCTGTAAGTGATAAGTTTT CAATAAACAGGTTTAGAACACTGAAAAGCTCTAGAACTGAACttaatatt ttctatttttcaaattttagccaTTGACCAGTCAAACTTGATTAAGCGTG GTCGACCGAAAAAAGGAAGGAAAATATCGATCGATAACGATTTGTTACTG GAAATACTAAGATCCGAAATTTTTTTACAAAAACGAGTTCTCGATAAAAA CGATTGGAAAGTCATCACTCAAACGTACTGTGATAAACAACGTGTCCGAG ATCATGAAATTAAACGTTTGAAAAACTCTCATGTGGGTAGGAACTACAGG AAACTGATCGAAAAATCTGATGGTTTTGATTTGGATGAAGACGGAGAACA AAGTGAAAATGAAAATGGGGATGGAGTTGAAGAGGAAAGAGATGAAAAAG GAGATGAAAAAGGGGATGGAAGTGACGAGGATGAAGATGAAAAAGGAGAT CAGAGTAATGAAGAAGAGAAAGTAGAGGAAGGAGATGAAAAAGGGGATGG AAGTGACGAGGATGAAGATGAAAAAGGAGATCAGAGTAATGAGGAAGAGC AAGTAGAGGAAGGAGATGAAAAAGGGGATGGAAGTGACGAGTTTGAAGAT GAAAAAGCAGATCAAAGTAATGAGGAAGAGCAAGTAGAGGAAGGAGATGA AAACGGAGATCAAAGTGACGAGTTTGAAGATGAAAAAGGAGATCAAAGTA ACGAAGAAAAGCAAGTAGAGGAAGGAGATGAAAAAGGAGATGGAAGTGAC GAGTTTGAAGATGAAAAAGGAGATCAAAGTAATGAGGAAGAACAAGTAGA GGTAGATGAAAAAGGAGATGAAAGTGACGAGGAAGACCAAGAAGAAGATG AAGCTAGATTTGGCAACTTAATGAATGCGGTGGTTCTTGATGACAAGGAA GGCTATTACGAACATCGAAGATCCTTTGCTATCGATTTGATAAAATCCGT TGTTACAAATATAACTAAGGAATCAATTGACTTGGTTTTTCCTAGAAACA AAACTCCATCAGGCAAAATCAAAAAAATGACCCAGTTGAATACTCAAGGG AGGAAGTCGCCACACTCTATCATCGAGGAAGAAAGCGAGGATCCCCAAGA TGTAAGTTTTTTTAATGAAGTTGGTTTGGATCATTCAACGGCGGAGAGCT TGGCAAACAAGAAACTAACAAAAACCAAATTCTTCACGAGAGATTTCCAT GGAAAGAAAGCTTCTTATATGATAACTCCTGAATTTAGGAAAATTCCAAT TATTTGTGACCGGAAAACACTCAAGAGAAGACGTGGAGGAAACTGGGTCG ACATCACTCTAAAACTTATTAAGGAAGCAAACCCGTTCTGTTCTTGGAAG TTCACTTACAACCACATCAGAAAAAATAAAACAAACAAAAAAAATTCAAG TTACTGGGTGGCAAAAGCAAAATGTACATTTGTTGATTGCAATTGTCGTG TTGAAATAACCCAAGAAGATAAAGAATCTCTGGAGCTTGTTTTCCATTTT ATTGGCGACATAAACCACAATGTTACTAAGCCTAAATCAAGGAAAATTAA CGGCGAAGCTCGAAAGCAAGTAAAATCAAAATTTTTGAAAGAGCCGAACC ACAGTGCTGCCGGGAATTACCGCAAGAGTCTCGCATCCATTCCAAGTGAT GTTTTTGCTTCAGGAAATAGAGACCGTGTGGGAACTTCCAAAAAAGTTCA CCAAAAAATCCGATCAGAAGTTAATATTGAGCTGAACGGAATCAATAATC TCCACAAAAACCTTTGTGATCTACAGAGGAGATTGGCAGAAGATGACAAG TCAATGTCGCAAAAGTTAGACCTGAAATTCAGAAAGATATTTGGATTCAT TCAACGATTCATTGTAACTGATACTGAATTCAAATTGGTTATGTTTGAAG AGAAGCATGTCAGATTGTACCATAATACTGCAAAACGAGATATTATCTAC CTAGACGCAACCGGAGGAATCGTTAAAAAAATCAAAGCTTTCAAGAAAAT CTTTATGTATGCATTGACAATGCGGCATCCTTTCGGGAAAACAGTTGCAC TGCCTGCCCTGAGTTATCTCACATCAAGCCATTCCATGGAGTCTGTAAGG TTTTCCTTAATGGCACTCAGGGAAAACGAGAGGCAAGTTTTTGGCGAATG CTCCCAACCCAAATTAGTCATATTGGATAATAGTAAAGTTCTCCAAGGGG CTATTCTACGAGAATTCAACAATGAGTCCATAACAGATTATGTAAACAGA GTATTTGACACATTAACGCTATCGAGTAGTCAACGGTCAACTCTCACAAA GATACTAACAGATATCTTTTCGTGCAGTGGTCACCTGTTGAAACAGGTAA AAAGAGCTGTCTCGAAAAAGTGCGCGACAATCAAAGATTTCATTCTTTTC AGTATTGGAAGGATGATTGTGTGCGAAAAATTGGAGGAATTGACTACAAT CATCACTTTGTTTTCATCGATTCTCACAACAAGGTTCTCCAGTGATGGTC TTCGTGATGCTGTCAAAATGATGGAAAATTACATCAACCAATTTGATGGT CACGATTTGGTTGAAGATGTACTGTCAGACCAAAATGATAAGGATGATGA GTTGGAAAGTGAGGAGGACGATGATGATGATGAAGAAGAAGATGTTGAAA AAGATCATGGAGAAGTTGAAGAAAAAGATGGTAACGAAAAGAAAACAAAG GCGAATGCAAAGACAGAAAAGACAaagacaaaaaagaagaaaaaagaaaa caaatggaCAACTTATTGGACTGACCAGATTGACAAATCAAGACGTAAAT ATGAATGGGTGGGGGAAGATATAAATGAAGCACCAATCAATGAATACTAT TCTCCAaccttttttgagtattttaagAAGAATCTTTTAAATATTACTCC CATCTGGACACGGATTTGGATCAGCGAAAGAAACCCTGATACATTAAAGG GTCGATCGACTAAAGACCAAAACTCCACAAACGCCACcgttgaaaacttt ttcaaatatgtAAAAAGTGAGCATGATACATCTTTGCCCATCGTATCATT TGTGAAAAAGTATCATGAAAGTTTGAATAACTTGTCCGTTGAATTCCTAG AAGGCATAGTTCAAGGGTGTGGAAATGTCGgagagaaagaagaaaaaatt atcaGAATTTTTCGGGATGAAGTAGAGGATAACCCTGTTTCCATCGATAC TGAGAAATGGAGTAAAAGGCGGAAAAGAAAACCAGGCAATAAATACCTTA GACCAAAGAAGAAAGCCAAATTAATCACTTCTACACAAAAAGGTAAGGCT GAATCTGACGAGATGTCTGACACAGATGATGAAAATGAGGAAATAGAAGA AGAAAGGAACGAAATTGGCAATAACAACGAGGATGATGAAATAGAATTGG AAGAGGAAGTAAAAAAGGAAAAGTGGTTTGAAACAAGAGAGCTGAAAACT GCAAGGAAGAGCTGGCACGATTTCACAGAAAAGGAGAAAGAGATGATGAA TGAGAGTGGTCAACAAGGTTGCTGTTCAAGCGATATTCGGGGAGTGAACA TGGTTGCGTGTGAATTTTGTGAGAAGTGGTTCCATGAATGTTGCTTAAAT TTCGACTTTCAATTTTTGCAGCTTGTTGATTACATATGCTATGATTGTTT CAAAAGTAATACAACTGGGATTGctaactttttcttttatcactTCAAAA AGAATCCAGATCTTGATCAGCATGGTTGTGAAATGCATTGGAATACTCTG TCGGAGGAACACAAAAAGTCTTTTGGGGACCATATATTTCTAACGAAAAA GCTGTTGATTACTGACAAAATCATTGTGCAGAGTAAAATAGGCATAGTGA ACAAAAAACTAAACTGCTGGTTCTCGTCCGTTTTGCACTCACTTTTTGGG TCAAGTGCAAGTTGTCTTTTTGGTTCATCAAATCAAAGTTTATTGAGGAT CCAGGAAATGTTGAGAACTCAGCCAACAGCAAAAGTCCCTGCAATCAACT TGATGAGAGAGTACAAAGCGATGAGCGACGACCTTGGGATTGATGTCAAC TCGAACCGTAATCAAGATCCTTCTGACCTGGCCTTTGCTATCATTCGAAG ATTACCACTGGCACTTGATTTCAAGATCAGGGCACTTGTCATCCACAATT GCTCAAAATGTCAGCAGATTTTAAAGATTGACTCACGTACAGAAGAAGAA TCTTTGGATTTAACGGTACCAGCAAATTATCAACATTCAATTAAACTGAC TGATTTGGTGTGGTACAATTTAGGTGGATGGAAAAGCTATGATCATGACG ATATATTGGAAAGATGCTTGTGCAAATCAAATGAGATTTCTACTTTTGTC ACCTTACTAGACTCTCCAATTTATATTGTATTGAAGTTTAGTCGCATCAA GTATGTAAATAAGCAAGTCCATCTCGCAAAAACAAAGATATTGTTAGAGC ATGAAATCGATCTTGGTGAATTTTCCCCTGCCTTCCAAACAGATTCAAAG TATCTCTTGGTGTCTTCCGTAAACTATGCTGGTGGTCAGGATAGTGTTTT CTCAAATCATTTTACAGCCACCCTGTTCGACCATGAAAAAGGAAAAGCCG TATGGTTCGATGATAACACTGTGAAGCGTTTTACAACCGAAAAGTGGCTG AAAAATGAAAGCTTTCAAAAGTCAGTCTTTTATGCCATCTATATCAAGAA ATCCTCTATTGGTGAAAACAAAAGTTTTGACTATCCTTGGAACCTTGATG AAGAAAAGATTTTCCTAACAGAAAAAGTCATGTTTGGCGATTTAACACCA TCAAATATTACACCAACAAGCTCCTTGTTATCATGCTCCGGTAAAAATCT CGTTACTGGCGATATCATTTTTACTTTTGTTAAAGCTGTCGCAAGCAATT ATCCCTCTGTTAAAGTTGTTTCATCAGATGTCATAACTAATGCAAGAAGT TGCTCCCAAAATGTCGAGTTCCAGGTACTTCAAAGTGAAGGTATTTCCTT GTGTAACCTGGTAATCATAATCCATCATACACCTCCTGGACATTGGTCCA TTATCGGGATTTATCCAAAACAAAAAATGATTTTCCACTTGAATTCAATT GCCACTAAATCTGAGGAACCGTTTCAAGTGGCACTTTATATTGTTGAGAA GGTGTATGAGACACAAAGAGAACATTTTTTCTTTGCTCAGTGGCAGCTTT ATCAACCTGTCAAGGTTCCACAACAAAAAGACACGGTCAACTGCGGAGTA TTTGCATGTCTTAATGCCTACAATTTGATCGAAAGGACAACCTTTTCAGG TTTGGAGGATGACCCAGCGTGTATGCGGTATTGGATCGCATCTACTTGTC TTAATGCAGAAATTCATTTGCCTGAACGTACCAATTTTAAGACCAAATCG ATTGATCCTCCTGAAAAGTTCGATCACCTAATCATCGACCGACACCTCAA AACATGTAGATCACCGAACATATTTGACAAAATCTTTGAGACTGTGGAGA CTTATGTGCTATCGGATGATTCAGACAAAAATTCTAGTAGCTCCTCAAAT GAAGTACAATACGAGGAAGAAGTAAAACTACCATACGAGCTAGATCAATA CCTTGAATCAGGAGCTTACAAGGCACAATTAGAGGAAGTTTTTCGGACCC CGTTGAATGTCAATCAGTATGACATTGTCGTCTTTTACTCAGTGAGCTCA AGATCTCAAATAAAGGAGGCATTCTCGCAAGTTGATTTCAACTATGTAAT GTCTTTCAAGATGCGATGTGAAATTGGGCTCATACTGATGAGAAAAATGA ACGGTACCAGCTTTGGAATACCTATGAGACATACTACTGCAGATTTCTAT TTGGAGATTGTTTGTCCCGTCCTCCTTTGCCTTTTTTATAAAGGcacaaa gaaaatcaatttattGGAAGCAGAACGATTGGTCGCTCCAGGGTACCCCT ATCATGTCTTGCTTCTGTCACAGGTATTCAAACTttcttgaattttcttt ttcttttttttaaatcttttttctgttttgaatgTTACAGTACTCTCAAT TACTTGAAACAGAACCTTAAGGAAATGCAGTTTCTTAtgaaatttttcct aaaaaaagcTGAGAAGCattaaaaatgcaattttcagcCCCACTATTATT GCATAATAGAAGAGTAGAAAATAACACCTGTTAAGTTACTTTTGACTAAT CTCGTTTTTATATGTTGTTTAACAGAGTACAAAACACAGTAGCTTTTTGG CGAATACAgtgataaacaaaagaactgttCAAAGTAGGTACCCTTTTCTT CGCCGTAATTATTTCTAGCCAAAATAAACCCTGAAATTCCACAAAATCAC TCAAAATAAAGAACCTTAGCCTTACATTCTCCATAACTTTGCACTTGTAC TTAATCTctctattttattattttgataaatttaaaaGTACGAAAGTTCG TGAAATTAGTAGAAGTTCGCTAAATTAAGTACCCACGAATATTTTTGATA ATCAAGGTTAAATCCCACGATGGCATATTTTAAATCTTTTACATTGTAGT TGTGAAAGGTCAGTGTTCAAGCCAAAGGACCCACGCCATCGTTTATCTTG GATCCCCAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00043590TCONS_00043590Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00043590-proteinTCONS_00043590-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004373supercontigsc0004373:24..7183 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03 0.05 0.04 0.01 0.04 0.05 0.03 0.08 0.04 0.02 0.01 0.03 0.05 0.04 0.01 0.01 0 0.02 0 0.02 0.03 0.02 0 0.01 0.05 0.07 0 0.02 0.01 0.01