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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043487 ID=TCONS_00043487|Name=TCONS_00043487|organism=Clytia hemisphaerica|type=transcript|length=1374bp
ACGCTACATCCCCATAACTTTGGACATTAAATGGTTGGCAAAATGGTATT
AACATTCTATTGAGATGTGAAACTGGTtcaagttgaagaattgatgagaa
aaatgggtagtacgagaaatatttttgctttgaaatacaAACTCTTATAT
GGGCGACAATATCTCTGGAACAAGTTATATGAGATTTGTTTACCGAGTGA
ccccaaaacaaagtctttaatgcttggttcttacattcatgaggtcagag
gttttgtgaattttctaaacttttgaaacttgtgtgattgttttggagga
gaccctgccgacgcactggactgtccggtgtatttgtccggtggcaaaaa
gtatcgtTTCGCTACACCgcacgcaataagtccggtgtcagtccggtgtt
gcatacagggaattttggacgccggacatttatgaaacaaaaaattaaga
aacaccggacgcaccggactggtcatgtccggtgtttttgattgtccggt
gggaaaaaatatccttctcTGACACCGGACATCTGACTTCCTTAAGTCCg
gtgtagaaattgtccggtggtaaaaaaaattctcattttacaccggactt
tcgcgtgtccggtgttcgttaagtccggtgcgtcggcagggtccttgttt
tggttgttttcctgaCTAAAGACACCTAAAGACACTTTTGAATGTGTGAT
TGTTTTCCCTGACCAGAGATACTGTGAGCGTGTATTTAATAAACATATTG
CATCTTGGCTTGGagatatttttgaatgttttaacgGCGACCTCATTTCT
TGTTTGGATTGTTGTAGTGTTATCTTTTAGTACAGTACTCCAATGTTTCG
TACACGGCcaaaatataaaccttgtctgctcgagcagattgatttacatt
ctcCACAAAGAAGTCGATGGAAAAACTATTGTCCGATATTTTAGGTTGAC
ATATATTCTGGACAAAGAGGTCGATAGAATAAAGCATCTGCTCTTTTGTG
GATTAGATTGGTGTCAAGAGATATATCAACAAACTTCCACATAAATATAA
ACATGAAGGTAATCCAAGGTAATTTCAACCAAGCACACGAAATGTGTGAA
ACGTTCGTTTTTAATCTTAGATTTCTGGCCCCCTCCCCCTGTTCGTTTTC
GTTCGCTTTTTGGATGGcccccctccccctcccccctcAGCGACgaacat
actttttgaatggccccttAAAGAATTCATtgccaaaaaaatgacaaaac
ggtCACAATGCAATTNNNNNNNNNNNNNNNNNNNNNNNNNTGGCCTATCC
CATTTGTGCTGGTTTCcttgatttttaacaaacttagctttactgttctt
ttgttatacattttttaatataca Run BLAST on NCBI transcript from alignment at sc0004285:2672..4045 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043487 ID=TCONS_00043487|Name=TCONS_00043487|organism=Clytia hemisphaerica|type=transcript|length=1374bp|location=Sequence derived from alignment at sc0004285:2672..4045 (Clytia hemisphaerica)
tgtatattaaaaaatgtataacaaaagaacagtaaagctaagtttgttaa
aaatcaagGAAACCAGCACAAATGGGATAGGCCANNNNNNNNNNNNNNNN
NNNNNNNNNAATTGCATTGTGaccgttttgtcatttttttggcaATGAAT
TCTTTaaggggccattcaaaaagtatgttcGTCGCTgaggggggaggggg
aggggggCCATCCAAAAAGCGAACGAAAACGAACAGGGGGAGGGGGCCAG
AAATCTAAGATTAAAAACGAACGTTTCACACATTTCGTGTGCTTGGTTGA
AATTACCTTGGATTACCTTCATGTTTATATTTATGTGGAAGTTTGTTGAT
ATATCTCTTGACACCAATCTAATCCACAAAAGAGCAGATGCTTTATTCTA
TCGACCTCTTTGTCCAGAATATATGTCAACCTAAAATATCGGACAATAGT
TTTTCCATCGACTTCTTTGTGgagaatgtaaatcaatctgctcgagcaga
caaggtttatattttgGCCGTGTACGAAACATTGGAGTACTGTACTAAAA
GATAACACTACAACAATCCAAACAAGAAATGAGGTCGCcgttaaaacatt
caaaaatatctCCAAGCCAAGATGCAATATGTTTATTAAATACACGCTCA
CAGTATCTCTGGTCAGGGAAAACAATCACACATTCAAAAGTGTCTTTAGG
TGTCTTTAGtcaggaaaacaaccaaaacaaggaccctgccgacgcaccgg
acttaacgaacaccggacacgcgaaagtccggtgtaaaatgagaattttt
tttaccaccggacaatttctacaccGGACTTAAGGAAGTCAGATGTCCGG
TGTCAgagaaggatattttttcccaccggacaatcaaaaacaccggacat
gaccagtccggtgcgtccggtgtttcttaattttttgtttcataaatgtc
cggcgtccaaaattccctgtatgcaacaccggactgacaccggacttatt
gcgtgcGGTGTAGCGAAacgatactttttgccaccggacaaatacaccgg
acagtccagtgcgtcggcagggtctcctccaaaacaatcacacaagtttc
aaaagtttagaaaattcacaaaacctctgacctcatgaatgtaagaacca
agcattaaagactttgttttggggTCACTCGGTAAACAAATCTCATATAA
CTTGTTCCAGAGATATTGTCGCCCATATAAGAGTTtgtatttcaaagcaa
aaatatttctcgtactacccatttttctcatcaattcttcaacttgaACC
AGTTTCACATCTCAATAGAATGTTAATACCATTTTGCCAACCATTTAATG
TCCAAAGTTATGGGGATGTAGCGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043487-exon-sc0004285-1491911889:2672..4045 | TCONS_00043487-exon-sc0004285-1491911889:2672..4045 | Clytia hemisphaerica | exon |
| TCONS_00043487-exon-sc0004285-1510915933:2672..4045 | TCONS_00043487-exon-sc0004285-1510915933:2672..4045 | Clytia hemisphaerica | exon |
| TCONS_00043487-exon-sc0004285-1575043694:2672..4045 | TCONS_00043487-exon-sc0004285-1575043694:2672..4045 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004285 | supercontig | sc0004285:2672..4045 . |
Blast
The following BLAST results are available for this feature:
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