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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043068 ID=TCONS_00043068|Name=TCONS_00043068|organism=Clytia hemisphaerica|type=transcript|length=1483bp
GAAAAAATTCCCGGACCCAAGTGAACCGTGACGATTGACCGATCTATGGT
GGGTGAGGAATTCATTGTAGCAGTCAATGTGTAATCGAAAGAGGtggtaa
aattttaaaagatataCAGTTACGAATAGACTACCTGTGTGCACTTGGTG
AAAGCTCCAAAGATTATTAGTGATTGATTAAAGTCAGGTAGTTGCATATT
CTACCTACTGGTACTGACTATTGTGTGTCTTCCGACCTATTCTCAATACA
ATAATATCAAATCACCTATTTGGTCCCACCCACTTCTTATCTATTGGACA
TTTTGAAGCTTCTATCTTGCTACCTTGATTATCTGTTTGAATATTGTTTT
GAGAATAATTAGTATGGTTGATGCTTATGGGTGGTGTGACTCTATGAGCC
TTTTTACCTttaattttggtgtttaaaaGTGGTCTTGATTATCATATGAT
TACATTCAGTTACAGGGATATTTGCTATTAATTTTAACCTCTGTTTATTG
GGTTCTTAAATTTCGAAATCTGTGAAAACAATATTATAAGTCATTAGGAT
ACTTGCGATGGACAAAATTTGTGCGGATGATGCAGGAATATGCTgatatc
attaattttttaaatttttgagtttaatTGGTGGTTTCTAGCTCAAGTGC
AGCCTTGTGGACGCACCAGTCTGTCTGATCCAAACAAAAACACCTGAATG
TCTGGTGTGTTGGCAGGGCGGTTGTCCAACCACGTGCGTTTGTGTAgagt
aaaatggcgaaatgcgaaaatcgaatttggcaaaaaaaatttgaaaaatg
accctacaagatttgactgtatctttttattccatgaagagattactttc
aaataaaaaatgtattaacaagGAATGGGTAAGCCTTCTAGAAATccaaa
cataaattgcatagcttttaccaaaaaatagcactttaggatcagaaaca
gtcaaaaaccagctttttccaattttcttcgagttacaggaatacacctt
atcggaaattccacaaaTACAATTGCGCTAAAATGGATCCGTTgaaattg
ggaggtaaacataaatggtAGCGCGAGTAGCGACGGTATGGCTAGCAATC
CATAGAGTACGCTCGCGTAGTACGACCCAGCTTCAACACTACATTTCCGT
CACGTAAATATACTACATGAATTCTAAACCTGTATAAAAGTTCCCGCGTA
AAACAAGAACTCATTTGCTTATATCTGGCTTGTTtatgttcctaaaaata
cactgaatttgaaaaaaaaaacaaaacaaagctttcaagaggctagcaga
agctattagaaagagaaaaacaacaacttcggtggttcttcagttcattt
ggaggctcttttggcatcaacattttgggtgttttgtaaggctttttgcc
tgaaaaccgcaatatcgagcttgtttacctcccaaaaagtgttgcgtagc
aacaacgcgaggaggtggaatttccgataaggt Run BLAST on NCBI transcript from alignment at sc0003899:7083..8565 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043068 ID=TCONS_00043068|Name=TCONS_00043068|organism=Clytia hemisphaerica|type=transcript|length=1483bp|location=Sequence derived from alignment at sc0003899:7083..8565 (Clytia hemisphaerica)
accttatcggaaattccacctcctcgcgttgttgctacgcaacacttttt
gggaggtaaacaagctcgatattgcggttttcaggcaaaaagccttacaa
aacacccaaaatgttgatgccaaaagagcctccaaatgaactgaagaacc
accgaagttgttgtttttctctttctaatagcttctgctagcctcttgaa
agctttgttttgttttttttttcaaattcagtgtatttttaggaacataA
ACAAGCCAGATATAAGCAAATGAGTTCTTGTTTTACGCGGGAACTTTTAT
ACAGGTTTAGAATTCATGTAGTATATTTACGTGACGGAAATGTAGTGTTG
AAGCTGGGTCGTACTACGCGAGCGTACTCTATGGATTGCTAGCCATACCG
TCGCTACTCGCGCTaccatttatgtttacctcccaatttcAACGGATCCA
TTTTAGCGCAATTGTAtttgtggaatttccgataaggtgtattcctgtaa
ctcgaagaaaattggaaaaagctggtttttgactgtttctgatcctaaag
tgctattttttggtaaaagctatgcaatttatgtttggATTTCTAGAAGG
CTTACCCATTCcttgttaatacattttttatttgaaagtaatctcttcat
ggaataaaaagatacagtcaaatcttgtagggtcatttttcaaatttttt
ttgccaaattcgattttcgcatttcgccattttactcTACACAAACGCAC
GTGGTTGGACAACCGCCCTGCCAACACACCAGACATTCAGGTGTTTTTGT
TTGGATCAGACAGACTGGTGCGTCCACAAGGCTGCACTTGAGCTAGAAAC
CACCAattaaactcaaaaatttaaaaaattaatgatatcAGCATATTCCT
GCATCATCCGCACAAATTTTGTCCATCGCAAGTATCCTAATGACTTATAA
TATTGTTTTCACAGATTTCGAAATTTAAGAACCCAATAAACAGAGGTTAA
AATTAATAGCAAATATCCCTGTAACTGAATGTAATCATATGATAATCAAG
ACCACttttaaacaccaaaattaaAGGTAAAAAGGCTCATAGAGTCACAC
CACCCATAAGCATCAACCATACTAATTATTCTCAAAACAATATTCAAACA
GATAATCAAGGTAGCAAGATAGAAGCTTCAAAATGTCCAATAGATAAGAA
GTGGGTGGGACCAAATAGGTGATTTGATATTATTGTATTGAGAATAGGTC
GGAAGACACACAATAGTCAGTACCAGTAGGTAGAATATGCAACTACCTGA
CTTTAATCAATCACTAATAATCTTTGGAGCTTTCACCAAGTGCACACAGG
TAGTCTATTCGTAACTGtatatcttttaaaattttaccaCCTCTTTCGAT
TACACATTGACTGCTACAATGAATTCCTCACCCACCATAGATCGGTCAAT
CGTCACGGTTCACTTGGGTCCGGGAATTTTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043068-exon-sc0003899-1491911889:7083..8565 | TCONS_00043068-exon-sc0003899-1491911889:7083..8565 | Clytia hemisphaerica | exon |
| TCONS_00043068-exon-sc0003899-1510915933:7083..8565 | TCONS_00043068-exon-sc0003899-1510915933:7083..8565 | Clytia hemisphaerica | exon |
| TCONS_00043068-exon-sc0003899-1575043694:7083..8565 | TCONS_00043068-exon-sc0003899-1575043694:7083..8565 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003899 | supercontig | sc0003899:7083..8565 . |
Blast
The following BLAST results are available for this feature:
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