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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043037 ID=TCONS_00043037|Name=TCONS_00043037|organism=Clytia hemisphaerica|type=transcript|length=1347bp
ATAGGAGGTAGCACTTGTGCActgaatttcaacatttttgaaggcTATTT
TGAGACTGGTAATATTTCAGTAAATTTTGTTCAGGAGGAACTCTTATTAC
GACATTCTGGTGCAGTTTTAGTGATAGCTGGAAATTGCTTAGCTGTGATG
CActataacaaaaattactttttttttgactcgcATAGCAGAGACTCCAA
AGGCCATCAAGTTGAAGGCAGTATTGGTTTAAAGTTTGACAACTTACAAG
AAATTAAACAGTATATAAGATCTGAGTATAAGAACATAAATCTTTTCAAT
ATCATTTATCTCGAAACTGATTTTCATGATcaggaaaatataaaaaatac
tgTATCAAGGCAAGTAtcacgcagacaaaaaaattgttcacATAAGAGAT
CAGTTGAAAAGATTAAAGGTACTGATCAATATAAAGATTTATTGGAAAAA
CAAAACACTTCTAAGAAAAGATCCCGTGAAAAAATCCAAGGCGCGGATAA
GCATGAACAGGTAAAGAAGAACAAACGTAAGCATCGGGAATtaaataaag
gatcagaaaaacatgagcaAGAAAAAGAACTAAAACGTAAGCATCGGGAA
TtaaataaaggatcagaaaaacatgatcAAGAAAAAGAACTAAAACGTAA
GCATCGGGAATtaaataaaggatcagaaaaacatgatcAAGAAAAAGAAC
TAAAACGTAAGCATCGGGAATtaaataaaggatcagaaaaacatgatcAA
GAAAAAGAACTAAAACGTAAGCATCGGGAATtaaataaaggatcagaaaa
acatgatcAAGAAAAAGAACTAAAACGTAAGCATCGGGAATtaaataaag
gatcagaaaaacatgatcAAGAAAAAGAACTAAAACGTAGGCATCGGGAA
TtgaataaaggatcagaaaaacatgagaaagaaaaagaaaaaaagcgtaG
AGTCTACATAGCTAACAAGAAACTTAATGTAGGAAAAAGGGTTGACAACT
TCAGGCAGAAAAAACAAGAGGGCCCGTCCTTCATCTGTGTAATGTGTAAC
CGCTGTATGTATAAAAAATCTGTGTTTGGTTTTGATGAACAAAAATTCTC
ATTGATCAactttgaagaaatagaaaattttgatcCTGTAACCTCGTTTG
ATGGTAATTTCTACGTATGCACAACCTGTCATAGAAAATTAATGAAGGGA
GAAATCCCATGTCAGTCTGTTACTAACaagcttcaaatttttgatctCCC
AAATGATCTAAATGATATACGAAAACTGGAAAGAATTTTAGTGGctcaaa
gaattttattttctaaagtcaTGATCATGCGTAAAGGTGAATTCCCT Run BLAST on NCBI protein sequence of TCONS_00043037-protein >TCONS_00043037-protein ID=TCONS_00043037-protein|Name=TCONS_00043037-protein|organism=Clytia hemisphaerica|type=polypeptide|length=449bp
IGGSTCALNFNIFEGYFETGNISVNFVQEELLLRHSGAVLVIAGNCLAVM
HYNKNYFFFDSHSRDSKGHQVEGSIGLKFDNLQEIKQYIRSEYKNINLFN
IIYLETDFHDQENIKNTVSRQVSRRQKNCSHKRSVEKIKGTDQYKDLLEK
QNTSKKRSREKIQGADKHEQVKKNKRKHRELNKGSEKHEQEKELKRKHRE
LNKGSEKHDQEKELKRKHRELNKGSEKHDQEKELKRKHRELNKGSEKHDQ
EKELKRKHRELNKGSEKHDQEKELKRKHRELNKGSEKHDQEKELKRRHRE
LNKGSEKHEKEKEKKRRVYIANKKLNVGKRVDNFRQKKQEGPSFICVMCN
RCMYKKSVFGFDEQKFSLINFEEIENFDPVTSFDGNFYVCTTCHRKLMKG
EIPCQSVTNKLQIFDLPNDLNDIRKLERILVAQRILFSKVMIMRKGEFP Run BLAST on NCBI transcript from alignment at sc0003871:7..1353 Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043037 ID=TCONS_00043037|Name=TCONS_00043037|organism=Clytia hemisphaerica|type=transcript|length=1347bp|location=Sequence derived from alignment at sc0003871:7..1353 (Clytia hemisphaerica)
AGGGAATTCACCTTTACGCATGATCAtgactttagaaaataaaattcttt
gagCCACTAAAATTCTTTCCAGTTTTCGTATATCATTTAGATCATTTGGG
agatcaaaaatttgaagcttGTTAGTAACAGACTGACATGGGATTTCTCC
CTTCATTAATTTTCTATGACAGGTTGTGCATACGTAGAAATTACCATCAA
ACGAGGTTACAGgatcaaaattttctatttcttcaaagtTGATCAATGAG
AATTTTTGTTCATCAAAACCAAACACAGATTTTTTATACATACAGCGGTT
ACACATTACACAGATGAAGGACGGGCCCTCTTGTTTTTTCTGCCTGAAGT
TGTCAACCCTTTTTCCTACATTAAGTTTCTTGTTAGCTATGTAGACTCta
cgctttttttctttttctttctcatgtttttctgatcctttattcaATTC
CCGATGCCTACGTTTTAGTTCTTTTTCTTgatcatgtttttctgatcctt
tatttaATTCCCGATGCTTACGTTTTAGTTCTTTTTCTTgatcatgtttt
tctgatcctttatttaATTCCCGATGCTTACGTTTTAGTTCTTTTTCTTg
atcatgtttttctgatcctttatttaATTCCCGATGCTTACGTTTTAGTT
CTTTTTCTTgatcatgtttttctgatcctttatttaATTCCCGATGCTTA
CGTTTTAGTTCTTTTTCTTgatcatgtttttctgatcctttatttaATTC
CCGATGCTTACGTTTTAGTTCTTTTTCTtgctcatgtttttctgatcctt
tatttaATTCCCGATGCTTACGTTTGTTCTTCTTTACCTGTTCATGCTTA
TCCGCGCCTTGGATTTTTTCACGGGATCTTTTCTTAGAAGTGTTTTGTTT
TTCCAATAAATCTTTATATTGATCAGTACCTTTAATCTTTTCAACTGATC
TCTTATgtgaacaatttttttgtctgcgtgaTACTTGCCTTGATAcagta
ttttttatattttcctgATCATGAAAATCAGTTTCGAGATAAATGATATT
GAAAAGATTTATGTTCTTATACTCAGATCTTATATACTGTTTAATTTCTT
GTAAGTTGTCAAACTTTAAACCAATACTGCCTTCAACTTGATGGCCTTTG
GAGTCTCTGCTATgcgagtcaaaaaaaaagtaatttttgttatagTGCAT
CACAGCTAAGCAATTTCCAGCTATCACTAAAACTGCACCAGAATGTCGTA
ATAAGAGTTCCTCCTGAACAAAATTTACTGAAATATTACCAGTCTCAAAA
TAgccttcaaaaatgttgaaattcagTGCACAAGTGCTACCTCCTAT Coding sequence (CDS) from alignment at sc0003871:7..1353 >TCONS_00043037 ID=TCONS_00043037|Name=TCONS_00043037|organism=Clytia hemisphaerica|type=CDS|length=1347bp|location=Sequence derived from alignment at sc0003871:7..1353 (Clytia hemisphaerica)
AGGGAATTCACCTTTACGCATGATCAtgactttagaaaataaaattcttt
gagCCACTAAAATTCTTTCCAGTTTTCGTATATCATTTAGATCATTTGGG
agatcaaaaatttgaagcttGTTAGTAACAGACTGACATGGGATTTCTCC
CTTCATTAATTTTCTATGACAGGTTGTGCATACGTAGAAATTACCATCAA
ACGAGGTTACAGgatcaaaattttctatttcttcaaagtTGATCAATGAG
AATTTTTGTTCATCAAAACCAAACACAGATTTTTTATACATACAGCGGTT
ACACATTACACAGATGAAGGACGGGCCCTCTTGTTTTTTCTGCCTGAAGT
TGTCAACCCTTTTTCCTACATTAAGTTTCTTGTTAGCTATGTAGACTCta
cgctttttttctttttctttctcatgtttttctgatcctttattcaATTC
CCGATGCCTACGTTTTAGTTCTTTTTCTTgatcatgtttttctgatcctt
tatttaATTCCCGATGCTTACGTTTTAGTTCTTTTTCTTgatcatgtttt
tctgatcctttatttaATTCCCGATGCTTACGTTTTAGTTCTTTTTCTTg
atcatgtttttctgatcctttatttaATTCCCGATGCTTACGTTTTAGTT
CTTTTTCTTgatcatgtttttctgatcctttatttaATTCCCGATGCTTA
CGTTTTAGTTCTTTTTCTTgatcatgtttttctgatcctttatttaATTC
CCGATGCTTACGTTTTAGTTCTTTTTCTtgctcatgtttttctgatcctt
tatttaATTCCCGATGCTTACGTTTGTTCTTCTTTACCTGTTCATGCTTA
TCCGCGCCTTGGATTTTTTCACGGGATCTTTTCTTAGAAGTGTTTTGTTT
TTCCAATAAATCTTTATATTGATCAGTACCTTTAATCTTTTCAACTGATC
TCTTATgtgaacaatttttttgtctgcgtgaTACTTGCCTTGATAcagta
ttttttatattttcctgATCATGAAAATCAGTTTCGAGATAAATGATATT
GAAAAGATTTATGTTCTTATACTCAGATCTTATATACTGTTTAATTTCTT
GTAAGTTGTCAAACTTTAAACCAATACTGCCTTCAACTTGATGGCCTTTG
GAGTCTCTGCTATgcgagtcaaaaaaaaagtaatttttgttatagTGCAT
CACAGCTAAGCAATTTCCAGCTATCACTAAAACTGCACCAGAATGTCGTA
ATAAGAGTTCCTCCTGAACAAAATTTACTGAAATATTACCAGTCTCAAAA
TAgccttcaaaaatgttgaaattcagTGCACAAGTGCTACCTCCTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043037-exon-sc0003871-1491911889:7..1353 | TCONS_00043037-exon-sc0003871-1491911889:7..1353 | Clytia hemisphaerica | exon |
| TCONS_00043037-exon-sc0003871-1510915933:7..1353 | TCONS_00043037-exon-sc0003871-1510915933:7..1353 | Clytia hemisphaerica | exon |
| TCONS_00043037-exon-sc0003871-1575043694:7..1353 | TCONS_00043037-exon-sc0003871-1575043694:7..1353 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003871 | supercontig | sc0003871:7..1353 . |
Blast
The following BLAST results are available for this feature:
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