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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043028 ID=TCONS_00043028|Name=TCONS_00043028|organism=Clytia hemisphaerica|type=transcript|length=103bp
ACTTTGTGCTTTGACTAATGCAAACAGTGAAAGCATGAATATTTCTTTGA
AAGTAGAGAGCCACATTCTATCTATAGCTGTTTCAAGTGGAAACTTTTTA
ACa Run BLAST on NCBI transcript from alignment at sc0003863:3501..5993- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043028 ID=TCONS_00043028|Name=TCONS_00043028|organism=Clytia hemisphaerica|type=transcript|length=2493bp|location=Sequence derived from alignment at sc0003863:3501..5993- (Clytia hemisphaerica)
ACTTTGTGCTTTGACTAATGCAAACAGTGAAAGCATGAATATTTCTTTGA
AAGTAGAGAGCCACATTCTATCTATAGCTGTTTCAAGTGGAAACTTTTTA
ACATATCTAGAAAGAAATCAATAGAAAAACATACACTATAATACAGATCA
TGATCTTTGGAAGGACGCAAGAAATGTCCCGACAGTTAGCCACACTAGTA
TTATGCCAAAATGTGCATCACAGATTAATGCTGTGAAAGCGCTTTATTGT
TTGCTTGACTTGTGAGCAAAGGAATGCCGGCTAGTTTAAAACACAGACGT
GACGTCACAGGTCAGTGCTGACAGGTCAGTTTTAATTACTATATATAAAA
AACGCAAAGATAATATTTGAAAAACACTTATTTAAAATATAACAAGACGA
CTTTAAGTCAAAGATTTTGCCTAGAATTTGAACTGCATGTGAAAAAGAAG
AATTAGAGATTGAAGGTAATCTGAAATCTACTTTACATCGAGCCTTGATG
TAACAATTTTACAAGAACAACGAGACTTAAAATCACTAAAACAATTAGAC
CAATTTAAAGAACAATTGCTGTTTAATTTTTAAGAACTCTTACAAAGTAT
ATGTTTATAAAAAATAAATATGCTCATATTGTGCGCCGTCCCTTGTTTAC
TTTGTAAGAACTAAATACCGAAAGGTGTATCACTGTTGATCAAGAGTTAT
TGATTTGATTCTTATATAAAATAAATGCTTATAAGAAAAGTAAATATGCT
CATACTATACGCCATCCCTTGTTTACTTTGTAAGAACTAATTACCGAAAG
GTATACCACCGTCTATCAAGAGTTATTGATTTGATTCCTATAAAGTAAAT
GCTTATAAGAAAAATAAATATGCTCATATTGTTCACCTTCCTTTGTTTAC
TTTGTAAGAACTAATTACCGAAAGGTATATCACTCTCTATCATGAGATTG
ATTTGATTCTTATAAAGTAGATGCTTATAAGAAAAATAAATATGCCCATA
TTGTGCGCCGTCCCTTGTTTACTCTGTAAGAACTAATTACCGAAAGGTAT
ATCACCATCTATCAAGAGTTATTGATTTGATTCTTATAAAGTATATCTAT
ATGCTTATAAGAAAATAAACTAAAATATGCTCGCAATTCATTTAATGATA
TTCATGATGTAATCTTTTATACGGAAGCATCCGTGGTTACACAAACTAAT
ACTACCGATACTCTACTTTCGCTTTCAGTAGAAGCTGACCGTAATACTTT
CGCTAGGCGAAATTAATAATATTAAAAATCATTCTGAAGCATTTCCATTA
CATATAATATTTACAGAAGCATGTTGTGATCATATGTCACAAACGGGTTA
CAATCTTCAAGTCTGTGGTTTGTGTGACCTGTGACCAAAGTCTATGAATT
GACCTGCAACCTGCAGTCCTGGCGTAAATTGGTTTATAGTCTGTTTGCGT
CGGCAAAAAAAATGCCAAATTTTTCAAAAGACTTTTACTAAAAATGATAA
CTGTCGAAACAATCGAAGAACTACAAAAACAATTATAGATCTCCAGCTGT
CTGTTTTTTTTAACACAATTTTAAATTTTAAATTGGGAAAAATGAAAAAT
GAAAAATGAAAAATGAAAAATGAAAAATGAAAAATGCCTATTCTGCCAAG
GCAAACAGCAAATTTAGCCATTTGCTTCGGCAAAAAAATGCCGAGGCCAA
AAAAATTGAATTGCCAGGGCTGACCTGCGACGTGTGAGCTGCATTTTGAA
CTAGCTGAAGGGATGCTAGAAACCCAAAAACCTATGTAATTGACCTGAAT
GAACCAATTACTTAGAAAAAGCACTTAATTGTTAAGGGATCTTTTGTGCA
GATGTGCAGAATTATCTTCACTCTGCAGCCCATAATCAAGGCCCAACAAA
TCGAAGCTCTATATCTCAGGAATTGAATAACACATTTTGATTGGTTGATA
AGCTTGCTCTTGCATGTTAGCAATCAGTCATTTCAATTGTCTCAAGTTTT
CAATTTTTATTTATTTTTCTTGAGATCTTGAGCTTGATTCAAGTAACTCT
CATCCTTGTTTTCACAAACACATCTTGTTATATAGATGACTGATGTTTCA
TCTGGAAGGTTTGAATTATGGATGTCTGCCTTACCACAAAATAGAGTCTC
CTAACCCAACCCCTGTTTTGAGATAGTTGATCTTGACAGGGTATCAAAGG
GCATCAAACATTGGCCTTCTTTAGAGCACAGAGAATTTAAAATGCAGTCA
AAAGATGACTAAAAGGGACTATCTGATAAAACATGGGACGGCAATTCGGC
CACCATTTCACCGAACCTCCAAAGTAATTTGATTTGAGTTATAAAGGAAC
TGCGTATTTTAAAATACACAATTCAATTTCTATTTAGATTTTACAGTACC
GTAGAATTGTCCAATATCGACATGCGTCTTGTTATTTCGGCATAGCTGCA
TGCTGGTCTTCAAAATAAAAAATCTTAAACATAAAAAAATACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043028-exon-sc0003863-1575043694:5892..5993 | TCONS_00043028-exon-sc0003863-1575043694:5892..5993 | Clytia hemisphaerica | exon |
| TCONS_00043028-exon-sc0003863-1575043694:3501..3501 | TCONS_00043028-exon-sc0003863-1575043694:3501..3501 | Clytia hemisphaerica | exon |
| TCONS_00043028-exon-sc0003863-1510915933:5892..5993 | TCONS_00043028-exon-sc0003863-1510915933:5892..5993 | Clytia hemisphaerica | exon |
| TCONS_00043028-exon-sc0003863-1510915933:3501..3501 | TCONS_00043028-exon-sc0003863-1510915933:3501..3501 | Clytia hemisphaerica | exon |
| TCONS_00043028-exon-sc0003863-1491911889:5892..5993 | TCONS_00043028-exon-sc0003863-1491911889:5892..5993 | Clytia hemisphaerica | exon |
| TCONS_00043028-exon-sc0003863-1491911889:3501..3501 | TCONS_00043028-exon-sc0003863-1491911889:3501..3501 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003863 | supercontig | sc0003863:3501..5993 - |
Blast
The following BLAST results are available for this feature:
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