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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042877 ID=TCONS_00042877|Name=TCONS_00042877|organism=Clytia hemisphaerica|type=transcript|length=530bp
ttgctcCGCCATTAAATAAcgagtcttttttttttccacACAGGTTTCGG
ATCTACCGTCTTAATTAAAATATCGTACCCCGTACAAGTCGTTAATTGTT
GGTTCAGCCAAATTTCCTAAAAAAGGtaagaaaactttaaattttcgtCA
AAAGTAAATCACGCTTTGGTTGGGCACGAAGTGAACAGTGAATTTGAAAA
GGTATAGGGCACGAAGTGAACAGTCTTTTGAAAAGGGTTCGGGCACGAAG
TGAACAGTCTTTTGAAAAGGGTTCGGGCACGAAGTGAACAGTCTTTTGAA
AAGGGTTCGGGCACGAAGTGAACAgtcttttgaaaaagatttgggCACGA
AGTGAACAGTGAATTTTGAAAAGGGTTCGGGCACGAAGTGAACAGTGAAT
TTTAAAAAGGGTTTGGGTACGAAGTGAAcagtgaattttgaaaaattttg
ctgcGCCATTAAATAACGAGTCTTTTTTTTCACACAGGTTTCGGATCTAC
CGTCTTAATTAAAATATCGTACCCCGTACA Run BLAST on NCBI transcript from alignment at sc0003755:34..1360+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042877 ID=TCONS_00042877|Name=TCONS_00042877|organism=Clytia hemisphaerica|type=transcript|length=1327bp|location=Sequence derived from alignment at sc0003755:34..1360+ (Clytia hemisphaerica)
ttgctcCGCCATTAAATAAcgagtcttttttttttccacACAGGTTTCGG
ATCTACCGTCTTAATTAAAATATCGTACCCCGTACAAGTCGTTAATTGTT
GGTTCAGCCAAATTTCCTAAAAAAGGtaagaaaactttaaattttcgtCA
AAAGTAAATCACGCTTTGGTTGGGCACGAAGTGAACAGTGAATTTGAAAA
GGTATAGGGCACGAAGTGAACAGTCTTTTGAAAAGGGTTCGGGCACGAAG
TGAACAGTCTTTTGAAAAGGGTTCGGGCACGAAGTGAACAGTCTTTTGAA
AAGGGTTCGGGCACGAAGTGAACAgtcttttgaaaaagatttgggCACGA
AGTGAACAGTGAATTTTGAAAAGGGTTCGGGCACGAAGTGAACAGTGAAT
TTTAAAAAGGGTTTGGGTACGAAGTGAAcagtgaattttgaaaaattttg
ctgcGCCATTAAATAACGAGTCTTTTTTTTCACACAGGTTTCGGATCTAC
CGTCTTAATAAAAATATCGTACCCCGTACAAGTCGTTAACTGTTGGTTCa
gccaaattttctaaaaaaggtaagaaaactttaaattttcgcAAAAAGTA
AATCACCCCTCTTTGGTTGGGCACGAAGTGAACAGTGATTTTGAAAAGGT
ATAGGGCACGAAGTGAACAGTCTTTTGAAAAGGGTTCGGGCACGAAATGA
ACAgtgttttgaaaaaggtttgGGCACGAAGTGAAcagtgaattttgaaa
aattttgctcCGCCATTAAATAACGAGTCTTTCTTTTTCCACACAGGTTT
CGGATCTACCGTCTTAATTANAAATTTTGGTCCGCCATTAAATaacgagt
tttttttttcacacaggTTTCGGATCTATCGTCTTAATTGAAATATCGTA
CCCCGTACAAGTCGTTTATTGTTGGTTCaaccaaattttctaaaaaaggt
aggaaaactttaaattttcgcAAAAAGTAAATCAGGGCACGAAGTGAACA
GTCTTTTTTAAAGGGTTCGGGCACGAAGTGAAcggtgaattttgaaaaat
tttggtccGCCATTAAATaacgagttttttttttcacacaggTTTCGGAT
CTATCGTCTTAATTGAAATATCGTACCCCGTACAAGTCGTTTATTGTTGG
TTcaatcaaattttctaaaaaaggtaggaaaactttaaattttcgcAAAA
AGTAAATCAGGGCACGAAGTGAAcagtgaattttgaaaaattttgctcCG
CCATTAAATAACGAGTCTTTTTTTTTCCACACAGGTTTCGGATCTACCGT
CTTAATTAAAATATCGTACCCCGTACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042877-exon-sc0003755-1491911889:34..520 | TCONS_00042877-exon-sc0003755-1491911889:34..520 | Clytia hemisphaerica | exon |
| TCONS_00042877-exon-sc0003755-1510915933:34..520 | TCONS_00042877-exon-sc0003755-1510915933:34..520 | Clytia hemisphaerica | exon |
| TCONS_00042877-exon-sc0003755-1575043694:34..520 | TCONS_00042877-exon-sc0003755-1575043694:34..520 | Clytia hemisphaerica | exon |
| TCONS_00042877-exon-sc0003755-1491911889:1318..1360 | TCONS_00042877-exon-sc0003755-1491911889:1318..1360 | Clytia hemisphaerica | exon |
| TCONS_00042877-exon-sc0003755-1510915933:1318..1360 | TCONS_00042877-exon-sc0003755-1510915933:1318..1360 | Clytia hemisphaerica | exon |
| TCONS_00042877-exon-sc0003755-1575043694:1318..1360 | TCONS_00042877-exon-sc0003755-1575043694:1318..1360 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003755 | supercontig | sc0003755:34..1360 + |
Blast
The following BLAST results are available for this feature:
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