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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042870 ID=TCONS_00042870|Name=TCONS_00042870|organism=Clytia hemisphaerica|type=transcript|length=1265bp
ctggacttagaatttttttcaagttgaataGTGACCAAAGGGGGTCTCGA
ACCGGGAACCTATAGGTTTCTAAACCAATGCCCTATCCACTAGTATGGTG
GCCCATGAGAGCCAAGTTAAATTGTTTTaacatttctataaaaaaaattc
aaaataatttacttttcacattcatttttgcgataacttttaatttaagt
tttgaactaaattttgatttcaaaattgatttactttctattttcgtttc
aaattaaaaacgggtttgttttttaaaaacgaTTTCCAACTCAGCCCATC
GAGGCCatgtcattttaaaatcaattttaaatttttttaaatgaattgat
CTGACAGCCCATTGAGGCCACTCATAGAAATGAGTAAATTTCAACagata
aagtttctttttataaataaagtttctttttataatagaacGAACCAGTT
GTTTGTTTTAGGGGGGTCACATTGGGGTTTCCTCGGAGCCAAAAATATTA
GAGCATATGGCGGCAACATGAAAGGGGTTGGAAGTAAATAAAACTTCCCT
Cctattacactctttttttataagaaccagtaaattttcgctgaggctcg
gctgttcttaattttttggcactttgagccttgaattgttcttatttttt
ccaaggtaaaaaacaagttttggctatttactttactatttagaggattt
tagaaaacagggattctttttgctataactctctaacttcagcctctcca
ctgttcttaaattgttctaattttttggcatttttgagcctcattgttct
tatataaaaaaagtgtatttcctCTCTTCTCAACATTTTTCCTTTCATGC
TCGCATGCTgcatattaagaaaaaattcgaCTCTTTATTTACACATCATA
ACAAAGGCTCTTCGTGTTCTCCATTgtttgatgaataattttgtctgtaa
aaagaagtaaatttttcaagacAATACAACCCACCAGCCAAACAAAGAAC
GATAGAAAGGAAAAGCACTGTGACGGAGAAAAAATCTCTCATTTATGGTA
CCATAGAACACTGGAGTAAAGGATATCATTTTATACTCTCCTACACATTT
GTAAATATGTTTGGGGTCTAAGCACTAAGTTGTTTTGGCCTTGATGGGCC
GTGAACTGTCAAAAAACCAATAAGTAACCATAGTAACTTCAATCTTTTAA
GCCTGTAGGGGTCTGGAGACAAAGCTGTCTTTGGCACTGATGGGCTACGT
GAGAAAAGTGATTTT Run BLAST on NCBI transcript from alignment at sc0003749:4239..5503 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042870 ID=TCONS_00042870|Name=TCONS_00042870|organism=Clytia hemisphaerica|type=transcript|length=1265bp|location=Sequence derived from alignment at sc0003749:4239..5503 (Clytia hemisphaerica)
AAAATCACTTTTCTCACGTAGCCCATCAGTGCCAAAGACAGCTTTGTCTC
CAGACCCCTACAGGCTTAAAAGATTGAAGTTACTATGGTTACTTATTGGT
TTTTTGACAGTTCACGGCCCATCAAGGCCAAAACAACTTAGTGCTTAGAC
CCCAAACATATTTACAAATGTGTAGGAGAGTATAAAATGATATCCTTTAC
TCCAGTGTTCTATGGTACCATAAATGAGAGATTTTTTCTCCGTCACAGTG
CTTTTCCTTTCTATCGTTCTTTGTTTGGCTGGTGGGTTGTATTgtcttga
aaaatttacttctttttacagacaaaattattcatcaaacAATGGAGAAC
ACGAAGAGCCTTTGTTATGATGTGTAAATAAAGAGtcgaattttttctta
atatgcAGCATGCGAGCATGAAAGGAAAAATGTTGAGAAGAGaggaaata
cactttttttatataagaacaatgaggctcaaaaatgccaaaaaattaga
acaatttaagaacagtggagaggctgaagttagagagttatagcaaaaag
aatccctgttttctaaaatcctctaaatagtaaagtaaatagccaaaact
tgttttttaccttggaaaaaataagaacaattcaaggctcaaagtgccaa
aaaattaagaacagccgagcctcagcgaaaatttactggttcttataaaa
aaagagtgtaatagGAGGGAAGTTTTATTTACTTCCAACCCCTTTCATGT
TGCCGCCATATGCTCTAATATTTTTGGCTCCGAGGAAACCCCAATGTGAC
CCCCCTAAAACAAACAACTGGTTCgttctattataaaaagaaactttatt
tataaaaagaaactttatctGTTGAAATTTACTCATTTCTATGAGTGGCC
TCAATGGGCTGTCAGatcaattcatttaaaaaaatttaaaattgatttta
aaatgacatGGCCTCGATGGGCTGAGTTGGAAAtcgtttttaaaaaacaa
acccgtttttaatttgaaacgaaaatagaaagtaaatcaattttgaaatc
aaaatttagttcaaaacttaaattaaaagttatcgcaaaaatgaatgtga
aaagtaaattattttgaattttttttatagaaatgttAAAACAATTTAAC
TTGGCTCTCATGGGCCACCATACTAGTGGATAGGGCATTGGTTTAGAAAC
CTATAGGTTCCCGGTTCGAGACCCCCTTTGGTCACtattcaacttgaaaa
aaattctaagtccag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042870-exon-sc0003749-1491911889:4239..5503 | TCONS_00042870-exon-sc0003749-1491911889:4239..5503 | Clytia hemisphaerica | exon |
| TCONS_00042870-exon-sc0003749-1510915933:4239..5503 | TCONS_00042870-exon-sc0003749-1510915933:4239..5503 | Clytia hemisphaerica | exon |
| TCONS_00042870-exon-sc0003749-1575043694:4239..5503 | TCONS_00042870-exon-sc0003749-1575043694:4239..5503 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003749 | supercontig | sc0003749:4239..5503 . |
Blast
The following BLAST results are available for this feature:
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