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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042834 ID=TCONS_00042834|Name=TCONS_00042834|organism=Clytia hemisphaerica|type=transcript|length=224bp
GGTCACTTTCCGCCAAACTTACGGCTATGCAAGAAGTTACAATTCCACTT
TAACCTAAACTAACAACCCATCACGTCATACGTTATTCAAAGTCTATCTG
CAAGGATTTTATCCTTGTCTTAGCAATAAAGCAATACTCTTTGGGTTTGA
TCTtgatgcatctacaatcgaacCAAGTGGAATCAATTTATTATTGGTCT
GCTACACTGACAGACAACAAATGG Run BLAST on NCBI transcript from alignment at sc0003717:8233..9926- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042834 ID=TCONS_00042834|Name=TCONS_00042834|organism=Clytia hemisphaerica|type=transcript|length=1694bp|location=Sequence derived from alignment at sc0003717:8233..9926- (Clytia hemisphaerica)
GGTCACTTTCCGCCAAACTTACGGTGAGTATTTAGAAACTCCTGTGCAAG
CTCAGTGCTAACAAGCCTCCAATCTGCTCCCAAAAGTTAACAGAGGCTAC
TGGCAGATCATTTAGAAATATTAAGATAAGCTCCAAAAATGTTTTAAATA
CTTATCTGGGTAAAATTTAGTACTTTAGAGGCCATTTCCCTTCATCGCTA
TGTGATTCTTGTACCGGGGCGATGAACCCAAAATTAGTTCTTAAGTTGAG
TATGACACCCGGTACTTAGACAAAAGGGGAATATTGGTGTATAAGGATAT
GTTTAGAAAAACACTCACCTTTCTTGCTATCTATCAACTGTTAGTTGATC
AATATTTTGATAATAAATACCTTCCAGCAAAACTGTGGGTCGAATACCGC
AAATCTAACCCTCGTCTAGTTCCGACACCCTTCTTTAGAGAAAGGAATAA
TATTAAAATTTGAATCACTGATTGAAAAAGGATTATTCCTCTCTGACCAC
CAAGCAAAGATGACAATCAGGCATTCACTCAATCAAAAAGTAAATTTTCT
CTTTCACGCAAGTTTTTAATTCCCGTATTCACAGATTTGTTTGTCAATTT
TCACGCGTTCACGCAACCAAAAAAAACACATTCACAAACTGCTGGGGACC
CCTTAAGCCACACGAGATAAAAACATTAACTAAAGGGCNCTGCTGGGGAC
CCCTTAAGCCACACAAGATAAAAACATTAACTAAAGGGCCTCCTTATCCA
TTGAATATTTGTGAAGGTACTGTCTAATTTTGGTTATCAAGGATAAAGTG
AATAGAAAAAAGTTAGTAATACTAATAGTATAATAACTTTTCCTTCTTAG
GCTATGCAAGAAGTTACAATTCCACTTTAACCTAAACTAACAACCCATCA
CGTCATACGTTATTCAAAGTCTATCTGCAAGGATTTTATCCTTGTCTTAG
CAATAAAGCAATACTCTTTGGGTAAGAATAATTTTGAAATTATTTGAAGC
TTATTATTGCTGTAAGTTTTTTCATTTTGGGCTTTTTTCTCTCATGTTCG
GTCATGTACAAAATTCTAATGTTTATGATCAATAATTATGCATTCTATTT
CATAAAATGTCAAGTCATTTTTACCAATTAGAAGGCATTCTTGAATTTCA
GATTACTTTTATATACACAGATGTGTTCATCTACCTACCTATCTATCTAT
CTATCTATCTATCTATCTATATATTTAAGTAGTGACAACACATACATGTT
CGATAGAAAAAAGTGTGCAGAGCAGAGTGTCTGAATCTTATTGGAAATAT
ATAGCTTCTTAAAATAACAGGATAGTGATTTTAATCTTTTATTCATATTT
CAATAGACCTTTTTTCAAAGAGGCCACCCTGTTGAATAATTATGTAGTCC
AGCAGAAAAACAATGATAAAACCATGCATAATTATTACAATATGCATGAT
ACATTAATTATGCATGGCTCGCTCTATCATTGTTTTTATGGCTGGACTAC
ATAATTATTCAACAGGAAGTCCTCTTTGAAAAAAGGTCTATGGAAAAAGT
TCCAGTTTGGATGGAAAGTGGTTGCCTTGTGTAAAGCTTAATGCAATTCA
TATATTTCTATCAGGTTTGATCTTGATGCATCTACAATCGAACCAAGTGG
AATCAATTTATTATTGGTCTGCTACACTGACAGACAACAAATGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042834-exon-sc0003717-1575043694:9904..9926 | TCONS_00042834-exon-sc0003717-1575043694:9904..9926 | Clytia hemisphaerica | exon |
| TCONS_00042834-exon-sc0003717-1575043694:8956..9076 | TCONS_00042834-exon-sc0003717-1575043694:8956..9076 | Clytia hemisphaerica | exon |
| TCONS_00042834-exon-sc0003717-1575043694:8233..8312 | TCONS_00042834-exon-sc0003717-1575043694:8233..8312 | Clytia hemisphaerica | exon |
| TCONS_00042834-exon-sc0003717-1510915933:9904..9926 | TCONS_00042834-exon-sc0003717-1510915933:9904..9926 | Clytia hemisphaerica | exon |
| TCONS_00042834-exon-sc0003717-1510915933:8956..9076 | TCONS_00042834-exon-sc0003717-1510915933:8956..9076 | Clytia hemisphaerica | exon |
| TCONS_00042834-exon-sc0003717-1510915933:8233..8312 | TCONS_00042834-exon-sc0003717-1510915933:8233..8312 | Clytia hemisphaerica | exon |
| TCONS_00042834-exon-sc0003717-1491911889:9904..9926 | TCONS_00042834-exon-sc0003717-1491911889:9904..9926 | Clytia hemisphaerica | exon |
| TCONS_00042834-exon-sc0003717-1491911889:8956..9076 | TCONS_00042834-exon-sc0003717-1491911889:8956..9076 | Clytia hemisphaerica | exon |
| TCONS_00042834-exon-sc0003717-1491911889:8233..8312 | TCONS_00042834-exon-sc0003717-1491911889:8233..8312 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003717 | supercontig | sc0003717:8233..9926 - |
Blast
The following BLAST results are available for this feature:
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