TCONS_00042789 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042789
Unique NameTCONS_00042789
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length117

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042789 ID=TCONS_00042789|Name=TCONS_00042789|organism=Clytia hemisphaerica|type=transcript|length=117bp
AATGGAATTGAATATGACACCTACTCTGAAGTAGAATGCCTTTTGTTGTG
CGCTATTTCTAACAGAAACCATATCCATTTTTCGAATACTACTGGAAAAT
GCAGTTGTATCGAGAAA
Run BLAST on NCBI

transcript from alignment at sc0003678:111..227

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042789 ID=TCONS_00042789|Name=TCONS_00042789|organism=Clytia hemisphaerica|type=transcript|length=117bp|location=Sequence derived from alignment at sc0003678:111..227 (Clytia hemisphaerica)
TTTCTCGATACAACTGCATTTTCCAGTAGTATTCGAAAAATGGATATGGT
TTCTGTTAGAAATAGCGCACAACAAAAGGCATTCTACTTCAGAGTAGGTG
TCATATTCAATTCCATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026588XLOC_026588Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042789-exon-sc0003678-1491911889:111..227TCONS_00042789-exon-sc0003678-1491911889:111..227Clytia hemisphaericaexon
TCONS_00042789-exon-sc0003678-1510915933:111..227TCONS_00042789-exon-sc0003678-1510915933:111..227Clytia hemisphaericaexon
TCONS_00042789-exon-sc0003678-1575043694:111..227TCONS_00042789-exon-sc0003678-1575043694:111..227Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003678supercontigsc0003678:111..227 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042789 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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