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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042714 ID=TCONS_00042714|Name=TCONS_00042714|organism=Clytia hemisphaerica|type=transcript|length=1321bp
CTTGTGAGTGAGGTCGaatatatagtttttaataaaaaacaaaaatgctt
ctGGTTATTCTATTTGTCAATATAGTTTTACAAATTCGCAGGCCACCTTg
cggacacatgggcctctatgaatcACTCATACATTTTGGGTTAATTATTT
ACATTGTTATAATATAGACAGTTATGCAACAATAATGACACGCACTTTCA
ATCATATTCAAACTTTTTAGCTTTCCAGGCCACACTAAGGGTCTCTTTAA
ATTCTTCAACTGAGGATGAGTTGACTACTTTTGAAGGCAAACTATTCCAC
TGCTTAATGCCCCGATAGTATAGGGAGTTACTCTGCGGACCGCGAACACC
ATCGTTCCCAAAGATTACTACTAATTCAGATTCTTGCGTTCTCATAGGTC
TCCCTTGCTGGTTACATTTCCTAGGGACGCAAGATTTGTCATAGTAGTTT
AGATGTTTAAAGATCTCAACCATGTCACTTACCTCGCGTCTGTATGTACC
AGGACTTGCATTCGATTTTCATAGCTTAGCCGTCCACATGTCTCAACTGT
TTTAGATGCGCGTCGCTGAACACCTTCTATCAATCTCGCatgtttttttc
agtttttgtgacCAAAACTTGGGCGTATTCTAAGTGTGGTCTGACAAATG
TTACGTACAGTTTTGGAAACAATTCAGGAGTGAGGTACGTGAAGGTCCGT
CTGATAAGACCAGCCATTGAATTAGCTTTTTTCACCTGATTTGATATGTG
TTGGTCAAAGGAGAGATTCTTATCAATGATAACACCAAGATCTTTTTCGA
ATGATACATGTTCAAGGATTTTATCCCCNCGATAATAACACCAATATTAT
TTTCGAATGATAAATGTTCAAGGATTTTATGCCATAGTGTGTATTCGTGT
ACATGTTTGATAATATTTGGCTTTCCTAGGGTTAGCACATGACATTTGTT
AGGATGAAAAGTTAATAGCCATGTTTCGGACCACTTTCGCAGTTGGTTGA
TATCGTTTTGTATTACTAGCGCATCCTCAACTGATTCCACTTTATTGACG
AGTTAggtgtcgtcagcaaaaagGAATAGTTTTGACTTAACGGAATCTAG
TAGATCGTTGATATAGAGAACGAAAATGGTAAGCCATAGAACACTGAACA
CTGCTTATTGCACCGATTCAACTCCGTTTACTTTGACAATCTGGGATCGA
TCCTTCAGGAAGTCTTTGATCCATTCAAGCAACTTGTGTTTTATCCCATA
TGCTTCTAGTTTGATTAGGAGCCGTTGATGAGGAACTGAGTCGAATGCTT
TCGCAAAGTCAAAGTATATTG Run BLAST on NCBI transcript from alignment at sc0003620:760..2080 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042714 ID=TCONS_00042714|Name=TCONS_00042714|organism=Clytia hemisphaerica|type=transcript|length=1321bp|location=Sequence derived from alignment at sc0003620:760..2080 (Clytia hemisphaerica)
CAATATACTTTGACTTTGCGAAAGCATTCGACTCAGTTCCTCATCAACGG
CTCCTAATCAAACTAGAAGCATATGGGATAAAACACAAGTTGCTTGAATG
GATCAAAGACTTCCTGAAGGATCGATCCCAGATTGTCAAAGTAAACGGAG
TTGAATCGGTGCAATAAGCAGTGTTCAGTGTTCTATGGCTTACCATTTTC
GTTCTCTATATCAACGATCTACTAGATTCCGTTAAGTCAAAACTATTCct
ttttgctgacgacaccTAACTCGTCAATAAAGTGGAATCAGTTGAGGATG
CGCTAGTAATACAAAACGATATCAACCAACTGCGAAAGTGGTCCGAAACA
TGGCTATTAACTTTTCATCCTAACAAATGTCATGTGCTAACCCTAGGAAA
GCCAAATATTATCAAACATGTACACGAATACACACTATGGCATAAAATCC
TTGAACATTTATCATTCGAAAATAATATTGGTGTTATTATCGNGGGGATA
AAATCCTTGAACATGTATCATTCGAAAAAGATCTTGGTGTTATCATTGAT
AAGAATCTCTCCTTTGACCAACACATATCAAATCAGGTGAAAAAAGCTAA
TTCAATGGCTGGTCTTATCAGACGGACCTTCACGTACCTCACTCCTGAAT
TGTTTCCAAAACTGTACGTAACATTTGTCAGACCACACTTAGAATACGCC
CAAGTTTTGgtcacaaaaactgaaaaaaacatGCGAGATTGATAGAAGGT
GTTCAGCGACGCGCATCTAAAACAGTTGAGACATGTGGACGGCTAAGCTA
TGAAAATCGAATGCAAGTCCTGGTACATACAGACGCGAGGTAAGTGACAT
GGTTGAGATCTTTAAACATCTAAACTACTATGACAAATCTTGCGTCCCTA
GGAAATGTAACCAGCAAGGGAGACCTATGAGAACGCAAGAATCTGAATTA
GTAGTAATCTTTGGGAACGATGGTGTTCGCGGTCCGCAGAGTAACTCCCT
ATACTATCGGGGCATTAAGCAGTGGAATAGTTTGCCTTCAAAAGTAGTCA
ACTCATCCTCAGTTGAAGAATTTAAAGAGACCCTTAGTGTGGCCTGGAAA
GCTAAAAAGTTTGAATATGATTGAAAGTGCGTGTCATTATTGTTGCATAA
CTGTCTATATTATAACAATGTAAATAATTAACCCAAAATGTATGAGTgat
tcatagaggcccatgtgtccgcAAGGTGGCCTGCGAATTTGTAAAACTAT
ATTGACAAATAGAATAACCagaagcatttttgttttttattaaaaactat
atattCGACCTCACTCACAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042714-exon-sc0003620-1491911889:760..2080 | TCONS_00042714-exon-sc0003620-1491911889:760..2080 | Clytia hemisphaerica | exon |
| TCONS_00042714-exon-sc0003620-1510915933:760..2080 | TCONS_00042714-exon-sc0003620-1510915933:760..2080 | Clytia hemisphaerica | exon |
| TCONS_00042714-exon-sc0003620-1575043694:760..2080 | TCONS_00042714-exon-sc0003620-1575043694:760..2080 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003620 | supercontig | sc0003620:760..2080 . |
Blast
The following BLAST results are available for this feature:
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