TCONS_00042689 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042689
Unique NameTCONS_00042689
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length196

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042689 ID=TCONS_00042689|Name=TCONS_00042689|organism=Clytia hemisphaerica|type=transcript|length=196bp
GTTGACGTCGTCGTGTTGGAAGTTGAAGATGAGAGCAATTTATTTCTGAT
TAAccaagaaagcaaaaatatttgtgTTGAATGCATGAGAGGATCAAGGA
GGATGAGGTGAACTGAATGACTGAACTCAAACGCTACAAGTCGGAGTCCG
TGGGACTGGGACGAGTAGGAGTGGGCGTGCAGTTTTACCCCGCCAT
Run BLAST on NCBI

transcript from alignment at sc0003609:3674..3869

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042689 ID=TCONS_00042689|Name=TCONS_00042689|organism=Clytia hemisphaerica|type=transcript|length=196bp|location=Sequence derived from alignment at sc0003609:3674..3869 (Clytia hemisphaerica)
ATGGCGGGGTAAAACTGCACGCCCACTCCTACTCGTCCCAGTCCCACGGA
CTCCGACTTGTAGCGTTTGAGTTCAGTCATTCAGTTCACCTCATCCTCCT
TGATCCTCTCATGCATTCAAcacaaatatttttgctttcttggTTAATCA
GAAATAAATTGCTCTCATCTTCAACTTCCAACACGACGACGTCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026502XLOC_026502Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042689-exon-sc0003609-1491911889:3674..3869TCONS_00042689-exon-sc0003609-1491911889:3674..3869Clytia hemisphaericaexon
TCONS_00042689-exon-sc0003609-1510915933:3674..3869TCONS_00042689-exon-sc0003609-1510915933:3674..3869Clytia hemisphaericaexon
TCONS_00042689-exon-sc0003609-1575043694:3674..3869TCONS_00042689-exon-sc0003609-1575043694:3674..3869Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003609supercontigsc0003609:3674..3869 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042689 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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