TCONS_00042536 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042536
Unique NameTCONS_00042536
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length563

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042536 ID=TCONS_00042536|Name=TCONS_00042536|organism=Clytia hemisphaerica|type=transcript|length=563bp
CTAGTGGATGGTGGTTGGTCTAGCTGGAGTGGTTTTTCTTCTTGCACACT
AAGTTGTGGAAGTGGTACGCAGTATCGAACACGAGCTTGTGATAATCCTG
CACGTCAGTACGGAGGAAAGCATTGCCAAGGCGATGAACGAGAAGAAAGA
GCATGCAATACCAATCCATGTCCCGTGGATGGTGGTTGGTCTAGCTGGAG
TGGTTTTTCTTCTTGCACACTAAGTTGTGGAACTGGTACGCAGTATCGAA
CACGAGCTTGTGATAATCCAGCAAGTCAGTACGGAGGAAAGCATTGTGAA
GGCGATGGACGAGAAGAAAAATCATGCAATACCAATCCATGTCCTGGTTG
CCGGTCAGGTTGGACCCAAAGGGATCATGAATGTTTTATGTACATTCCAA
CCCAACGTACTTGGAGTGACGCTGAAAGCGACTGCGTAGTAAAAGGTGGA
CACCTGGTGACTGTGTACAATGGTGATAGAAAGCAGTTCATCATTGATAC
ATTTCTTAAAGCGTCGAATGCTGAAATTTGGATTGGTATGAACGACAGAG
ACACAGAAGGAGN
Run BLAST on NCBI

protein sequence of TCONS_00042536-protein

>TCONS_00042536-protein ID=TCONS_00042536-protein|Name=TCONS_00042536-protein|organism=Clytia hemisphaerica|type=polypeptide|length=187bp
LVDGGWSSWSGFSSCTLSCGSGTQYRTRACDNPARQYGGKHCQGDEREER
ACNTNPCPVDGGWSSWSGFSSCTLSCGTGTQYRTRACDNPASQYGGKHCE
GDGREEKSCNTNPCPGCRSGWTQRDHECFMYIPTQRTWSDAESDCVVKGG
HLVTVYNGDRKQFIIDTFLKASNAEIWIGMNDRDTEG
Run BLAST on NCBI

transcript from alignment at sc0003480:215..3783+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042536 ID=TCONS_00042536|Name=TCONS_00042536|organism=Clytia hemisphaerica|type=transcript|length=3569bp|location=Sequence derived from alignment at sc0003480:215..3783+ (Clytia hemisphaerica)
CTAGTGGATGGTGGTTGGTCTAGCTGGAGTGGTTTTTCTTCTTGCACACT
AAGTTGTGGAAGTGGTACGCAGTATCGAACACGAGCTTGTGATAATCCTG
CACGTCAGTACGGAGGAAAGCATTGCCAAGGCGATGAACGAGAAGAAAGA
GCATGCAATACCAATCCATGTCCCGGTAAGAGTAACAAACGCCATNTCAG
TACGGAGGAAAGCATTGCCAAGGCGATGAACGAGAAGAAAGAGCATGCAA
TACCAATCCATGTCCCGGTAAGAGTAACAAACGCCATGGGGAAATTAGCG
GGTTTATCTTACTAAGATTTGTGTTTTCTTGACATTTCTTGCTATTTTTT
ATTCCCTAGATCCTGGTCACTGAGAGTAAAGGTAGATAATAAGCATTTGT
CCCATCCTCGATTTTGTAGACCAAAACTTCGGTTCTCTGTAAATTGTTTC
AACCAATTCTCCACACTCGTTGGGTTTTTGATTGAGGAGAGAAATGACAA
GAAGTCTCAGTATTTTCTCAGCCAGATAGGGCAGAATAGAGCTTATAGAG
TAACCCATATGATTAGGAGCTTGGAAAGCATTAACTGCAGCGAATCCCAA
TGATGTGGTTTATTAATTTAAAACCAGATCTCTGAACACTGTAGAAATTC
AAGAAGAGTTTGTTAACTTGGCCCCAAGGAATCTTAATTAAGGTAATTAA
GTAAAGATTATAAAGATAATGAAAAGTGTAACGTCCCTTATTATNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTAAAGAT
TATAAAGATAATGAAAAGTGTAACGTCCCTTATTATGAACTGCTAGATGG
ACTCTAAAACAACACCACCTTctatttgTTAAAAGTTGACGCAATTTATC
TCTTTGTTCTAGTGGATGGTGGTTGGTCTAGCTGGAGTGGTTTTTCTTCT
TGCACACTAAGTTGTGGAACTGGTACGCAGTATCGAACACGAGCTTGTGA
TAATCCAGCAAGTCAGTACGGAGGAAAGCATTGTGAAGGCGATGGACGAG
AAGAAAAATCATGCAATACCAATCCATGTCCTGGTAAGAGTAACCAACGC
CATGGGGAAATTAGCGGGTTTATCTTCTTACCCAGCGGCATTTAAGTCAC
CCTTCTCTGACGGATTTTGGATGGTAGTTCTTCTGTAGATATTCTATAAG
GGTTTTCTTTTTGTGTCTATCGTTAGTTTTGTATATTCATACTATCCTTT
ATTCAGTTATCAAAGTTTATGTTACATGGAGATTAATTGCTACAAGTAGG
TCAAATTTTGTTTGGGTTattaatttttgcattttttgtgatgaattttt
actgtttttgtCAGGTTGCCGGTCAGGTTGGACCCAAAGGGATCATGAAT
GTTTTATGTACATTCCAACCCAACGTACTTGGAGTGACGCTGAAAGCGAC
TGCGTAGTAAAAGGTGGACACCTGGTGACTGTGTACAATGGTGATAGAAA
GCAGTTCATCATTGATACATTTCTTAAAGCGTCGAATGCTGAAATTTGGA
TTGGTAAGTTCAATCTAGATTTcagggttttatttttacataaagtgttt
ctgtttcatatcagacacatatttcatatcaggacgaATAGGGATACCCT
AtagttatattgtgctgaataaaTGAAGAAATCGTATTCTTTTCctattt
ctgaccaatcttactccacatccgtgtcaattcaatgatgtgaaaaagct
tgtaaattaaaattaattagtaagcaaacgatatcactcttatttaaaaa
caaaacctttaaaatatctcaaaaattaTAGAATCTTTGGCGGTGCAAGG
ATATTTTAAGTACAAAGTGTAAAGATGAAAATTAATAACCTTAGAGAAGA
AATTTGGCAAGAAGAAATCTTAGTGAATGAGCTTGTGagaataaattaaa
agaaaattaaatttagcgagaatttattttggcgaatgacctataaattt
aaatttggtggAAAGAATTGTTGgcgaatttgacaaaatttttaggcagt
tcgccaaaatttcttcacttaagGTACATTAGGAGAAATCTTACCAATTA
TTCAGCTGAAGCTGTTGTGTGTTTTTTTGCTATCGTAAAAGGTATGAACG
ACAGAGACACAGAAGGAGN

Coding sequence (CDS) from alignment at sc0003480:215..3783+

>TCONS_00042536 ID=TCONS_00042536|Name=TCONS_00042536|organism=Clytia hemisphaerica|type=CDS|length=2805bp|location=Sequence derived from alignment at sc0003480:215..3783+ (Clytia hemisphaerica)
CTAGTGGATGGTGGTTGGTCTAGCTGGAGTGGTTTTTCTTCTTGCACACT
AAGTTGTGGAAGTGGTACGCAGTATCGAACACGAGCTTGTGATAATCCTG
CACGTCAGTACGGAGGAAAGCATTGCCAAGGCGATGAACGAGAAGAAAGA
GCATGCAATACCAATCCATGTCCCGTGGATGGTGGTTGGTCTAGCTGGAG
TGGTTTTTCTTCTTGCACACTAAGTTGTGGAACTGGTACGCAGTATCGAA
CACGAGCTTGTGATAATCCAGCAAGTCAGTACGGAGGAAAGCATTGTGAA
GGCGATGGACGAGAAGAAAAATCATGCAATACCAATCCATGTCCTGGTTG
CCGGTCAGGTTGGACCCAAAGGGATCATGAATGTTTTATGTACATTCCAA
CCCAACGTACTTGGAGTGACGCTGAAAGCGACTGCGTAGTAAAAGGTGGA
CACCTGGTGACTGTGTACAATGGTGATAGAAAGCAGTTCATCATTGATAC
ATTTCTTAAAGCGTCGAATGCTGAAATTTGGATTGGTATGAACGACAGAG
ACACAGAAGGACTAGTGGATGGTGGTTGGTCTAGCTGGAGTGGTTTTTCT
TCTTGCACACTAAGTTGTGGAAGTGGTACGCAGTATCGAACACGAGCTTG
TGATAATCCTGCACGTCAGTACGGAGGAAAGCATTGCCAAGGCGATGAAC
GAGAAGAAAGAGCATGCAATACCAATCCATGTCCCGTGGATGGTGGTTGG
TCTAGCTGGAGTGGTTTTTCTTCTTGCACACTAAGTTGTGGAACTGGTAC
GCAGTATCGAACACGAGCTTGTGATAATCCAGCAAGTCAGTACGGAGGAA
AGCATTGTGAAGGCGATGGACGAGAAGAAAAATCATGCAATACCAATCCA
TGTCCTGGTTGCCGGTCAGGTTGGACCCAAAGGGATCATGAATGTTTTAT
GTACATTCCAACCCAACGTACTTGGAGTGACGCTGAAAGCGACTGCGTAG
TAAAAGGTGGACACCTGGTGACTGTGTACAATGGTGATAGAAAGCAGTTC
ATCATTGATACATTTCTTAAAGCGTCGAATGCTGAAATTTGGATTGGTAT
GAACGACAGAGACACAGAAGGACTAGTGGATGGTGGTTGGTCTAGCTGGA
GTGGTTTTTCTTCTTGCACACTAAGTTGTGGAAGTGGTACGCAGTATCGA
ACACGAGCTTGTGATAATCCTGCACGTCAGTACGGAGGAAAGCATTGCCA
AGGCGATGAACGAGAAGAAAGAGCATGCAATACCAATCCATGTCCCGTGG
ATGGTGGTTGGTCTAGCTGGAGTGGTTTTTCTTCTTGCACACTAAGTTGT
GGAACTGGTACGCAGTATCGAACACGAGCTTGTGATAATCCAGCAAGTCA
GTACGGAGGAAAGCATTGTGAAGGCGATGGACGAGAAGAAAAATCATGCA
ATACCAATCCATGTCCTGGTTGCCGGTCAGGTTGGACCCAAAGGGATCAT
GAATGTTTTATGTACATTCCAACCCAACGTACTTGGAGTGACGCTGAAAG
CGACTGCGTAGTAAAAGGTGGACACCTGGTGACTGTGTACAATGGTGATA
GAAAGCAGTTCATCATTGATACATTTCTTAAAGCGTCGAATGCTGAAATT
TGGATTGGTATGAACGACAGAGACACAGAAGGACTAGTGGATGGTGGTTG
GTCTAGCTGGAGTGGTTTTTCTTCTTGCACACTAAGTTGTGGAAGTGGTA
CGCAGTATCGAACACGAGCTTGTGATAATCCTGCACGTCAGTACGGAGGA
AAGCATTGCCAAGGCGATGAACGAGAAGAAAGAGCATGCAATACCAATCC
ATGTCCCGTGGATGGTGGTTGGTCTAGCTGGAGTGGTTTTTCTTCTTGCA
CACTAAGTTGTGGAACTGGTACGCAGTATCGAACACGAGCTTGTGATAAT
CCAGCAAGTCAGTACGGAGGAAAGCATTGTGAAGGCGATGGACGAGAAGA
AAAATCATGCAATACCAATCCATGTCCTGGTTGCCGGTCAGGTTGGACCC
AAAGGGATCATGAATGTTTTATGTACATTCCAACCCAACGTACTTGGAGT
GACGCTGAAAGCGACTGCGTAGTAAAAGGTGGACACCTGGTGACTGTGTA
CAATGGTGATAGAAAGCAGTTCATCATTGATACATTTCTTAAAGCGTCGA
ATGCTGAAATTTGGATTGGTATGAACGACAGAGACACAGAAGGACTAGTG
GATGGTGGTTGGTCTAGCTGGAGTGGTTTTTCTTCTTGCACACTAAGTTG
TGGAAGTGGTACGCAGTATCGAACACGAGCTTGTGATAATCCTGCACGTC
AGTACGGAGGAAAGCATTGCCAAGGCGATGAACGAGAAGAAAGAGCATGC
AATACCAATCCATGTCCCGTGGATGGTGGTTGGTCTAGCTGGAGTGGTTT
TTCTTCTTGCACACTAAGTTGTGGAACTGGTACGCAGTATCGAACACGAG
CTTGTGATAATCCAGCAAGTCAGTACGGAGGAAAGCATTGTGAAGGCGAT
GGACGAGAAGAAAAATCATGCAATACCAATCCATGTCCTGGTTGCCGGTC
AGGTTGGACCCAAAGGGATCATGAATGTTTTATGTACATTCCAACCCAAC
GTACTTGGAGTGACGCTGAAAGCGACTGCGTAGTAAAAGGTGGACACCTG
GTGACTGTGTACAATGGTGATAGAAAGCAGTTCATCATTGATACATTTCT
TAAAGCGTCGAATGCTGAAATTTGGATTGGTATGAACGACAGAGACACAG
AAGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026359XLOC_026359Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042536-proteinTCONS_00042536-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042536-exon-sc0003480-1491911889:215..344TCONS_00042536-exon-sc0003480-1491911889:215..344Clytia hemisphaericaexon
TCONS_00042536-exon-sc0003480-1510915933:215..344TCONS_00042536-exon-sc0003480-1510915933:215..344Clytia hemisphaericaexon
TCONS_00042536-exon-sc0003480-1575043694:215..344TCONS_00042536-exon-sc0003480-1575043694:215..344Clytia hemisphaericaexon
TCONS_00042536-exon-sc0003480-1491911889:437..481TCONS_00042536-exon-sc0003480-1491911889:437..481Clytia hemisphaericaexon
TCONS_00042536-exon-sc0003480-1510915933:437..481TCONS_00042536-exon-sc0003480-1510915933:437..481Clytia hemisphaericaexon
TCONS_00042536-exon-sc0003480-1575043694:437..481TCONS_00042536-exon-sc0003480-1575043694:437..481Clytia hemisphaericaexon
TCONS_00042536-exon-sc0003480-1491911889:2527..2697TCONS_00042536-exon-sc0003480-1491911889:2527..2697Clytia hemisphaericaexon
TCONS_00042536-exon-sc0003480-1510915933:2527..2697TCONS_00042536-exon-sc0003480-1510915933:2527..2697Clytia hemisphaericaexon
TCONS_00042536-exon-sc0003480-1575043694:2527..2697TCONS_00042536-exon-sc0003480-1575043694:2527..2697Clytia hemisphaericaexon
TCONS_00042536-exon-sc0003480-1491911889:2979..3167TCONS_00042536-exon-sc0003480-1491911889:2979..3167Clytia hemisphaericaexon
TCONS_00042536-exon-sc0003480-1510915933:2979..3167TCONS_00042536-exon-sc0003480-1510915933:2979..3167Clytia hemisphaericaexon
TCONS_00042536-exon-sc0003480-1575043694:2979..3167TCONS_00042536-exon-sc0003480-1575043694:2979..3167Clytia hemisphaericaexon
TCONS_00042536-exon-sc0003480-1491911889:3756..3783TCONS_00042536-exon-sc0003480-1491911889:3756..3783Clytia hemisphaericaexon
TCONS_00042536-exon-sc0003480-1510915933:3756..3783TCONS_00042536-exon-sc0003480-1510915933:3756..3783Clytia hemisphaericaexon
TCONS_00042536-exon-sc0003480-1575043694:3756..3783TCONS_00042536-exon-sc0003480-1575043694:3756..3783Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003480supercontigsc0003480:215..3783 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.63468	1.17813	0.558646	0.355369	0.269987	0.426862	0.675265	0.639062	2.64302	1.88937	2.17467	3.13964	23.5962	19.3849	6.2071	8.41543	3.21737	5.86216	18.5819	18.5231	8.25505	7.70117	0.989148	0.431	7.64438	7.55583	0.465208	0.293113	0.872683	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
IPR001304C-type_lectin-like
IPR016186C-type_lectin-like/link
IPR016187CTDL_fold
Blast
[Close]
BLAST of TCONS_00042536 vs. Swiss-Prot (Human)
Match: HMCN1 (Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 8.648e-25
Identity = 56/109 (51.38%), Postives = 68/109 (62.39%), Query Frame = 1 
Query:   43 CTLSCGSGTQYRTRACDNPARQYGGKHCQGDEREERACNTNPCPVDXXXXXXXXXXXCTLSCGTGTQYRTRACDNPASQYGGKHCEGDGREEKSCNTNPCP--GCRSGW 363
            C+++CG G Q R+R C+ P    GGK CQG + E R C   PCPVDG WS WS +  CT SCG G Q RTR C+NP+ Q+GG+ CEG+  E   CN  PCP  G  S W
Sbjct: 4541 CSVTCGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPCPVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAW 4649

HSP 2 Score: 95.5153 bits (236), Expect = 3.880e-22
Identity = 50/110 (45.45%), Postives = 71/110 (64.55%), Query Frame = 1 
Query:   43 CTLSCGSGTQYRTRACDNPARQYGGKHCQGDEREERACNTNPCPVDXXXXXXXXXXXCTLSCGTGTQYRTRACDNPASQYGGKHCEGDGREEKSCNTNPCP--GCRSGWT 366
            C+ SCG GTQ R R C+NP   +GG +C G E + + CN   CP+ G W++W+ +S+C++SCG G + RTR C +P  QYGG+ CEG   +   CN++PCP  G  S W+
Sbjct: 4655 CSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWS 4764

HSP 3 Score: 93.2041 bits (230), Expect = 2.479e-21
Identity = 49/101 (48.51%), Postives = 65/101 (64.36%), Query Frame = 1 
Query:   43 CTLSCGSGTQYRTRACDNPARQYGGKHCQGDEREERACNTNPCPVDXXXXXXXXXXXCTLSCGTGTQYRTRACDNPASQYGGKHCEGDGREEKSCNTNPCP 345
            CT SCG G Q RTR C+NP+ Q+GG+ C+G+  E   CN  PCPV G WS+W  + +C+ SCG GTQ R R C+NP   +GG +C+G   + + CN   CP
Sbjct: 4598 CTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCP 4698

HSP 4 Score: 82.0333 bits (201), Expect = 1.259e-17
Identity = 48/114 (42.11%), Postives = 67/114 (58.77%), Query Frame = 1 
Query:   43 CTLSCGSGTQYRTRACDNPARQYGGKHCQGDEREERACNTNPCPVDXXXXXXXXXXXCTLSCGTGTQYRTRACDNPASQYGGKHCEGDGREEKSCNTNPCP-----GCRSGWTQ 369
            C++SCG G + RTR C +P  QYGG+ C+G + +   CN++PCP  G WS WSG+ +C+ +C  G   R R CDNP    GG+ C G   + + CNT+ CP     G    W+Q
Sbjct: 4712 CSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCPVDGSWGSWHSWSQ 4825

HSP 5 Score: 78.1814 bits (191), Expect = 2.120e-16
Identity = 45/102 (44.12%), Postives = 58/102 (56.86%), Query Frame = 1 
Query:   43 CTLSCGSGTQYRTRACDNPARQYGGKHCQGDEREERACNTNPCPVDXXXXXXXXXXXCTLSCGTGTQYRTRACDNPASQYGGKHCEGDGREEKSCNTNPCPG 348
            C+ +C  G   R R CDNP    GG+ C G + + + CNT+ CPVDG W SW  +S C+ SCG G + R R CD+P    GG+ C GD  +   CN   CPG
Sbjct: 4769 CSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCPVDGSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRPCPGDTTQVTRCNVQACPG 4870
The following BLAST results are available for this feature:
BLAST of TCONS_00042536 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HMCN18.648e-2551.38Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2[more]
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