TCONS_00042502 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042502
Unique NameTCONS_00042502
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2229

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042502 ID=TCONS_00042502|Name=TCONS_00042502|organism=Clytia hemisphaerica|type=transcript|length=2229bp
taGATAAAAGagattaaaaaatgaaagaaatgaaatGTTTTCTTCTGGTT
TTGCTGAACGTTTTGGTTGCTACCTCAGAATTATGTGATGAAAAATCAAT
CCCATCAAAGAATTCTACAATGATATTTCAATCATTTTGTAATAATAGCA
ATGGTGTTATTCAGGCTCGTAAATGCAATGCCAGTGATGTCATAATTGGA
TTGGATTTGAGTGATTGTGGAATCAAAGAAATGATTGACATCCCAAcaga
aataaaagaaaacttgATTTGGATtGCTCTGAATGATAACAAATTTACAT
TGAAAAGCAGCATTCCACATTTGCGATCtgctttaaaaattcaaatattG
GTAACAGATGAAGTGAACTGTACAGGATTTGAAATCAAAACCATCCAAAA
TGGTCTAACTGTCTGCTCCTCACCACTCAATCGATGTGAAGTGAAAGCTA
ACAGCAGCCAATCATattCTTGTTTGGAACACTCTAATTGTGGATACGAT
GGTCCAGGTCTTTTCTCATGTAATTGTGACAAAGAATGGCAAAGTTACAA
ATGTTTGAAACAAGATggatttccaaaagaaaaatggcTTATATCAATTG
CTGCTACAACTATTGCTATCATTATTGGAATAAGATTGCTTCAATTCAAA
GCacGTAAACGAGGAGATGAATacaaaaaattggcaaaacttTCGAATAC
TGATTATGCTAACCCTGAGGGGAGTCGTCAAGGAATTTNAAATTGGCAAA
ACTTTCGAATACTGATTATGCTAACCCTGAGGGGAGTCGTCAAGGAATTT
TTGATTAGATCTTGATGGGATAAAtaatcaaatatttcattttctgaCTA
CCTAAAGAGAACTTATTGGACCTACcatggaggtcctataaattaaccga
tgtccgtccgttcgtccgtccgtctgttaccagcttttgtcgcgattagt
tttttctgatttttggcacaatgatgcaaaatggtaatgcccaaaatgtc
acggagcccaattttcgaaaaaagatcatttccggccgaaaatgccggaa
atatgccggaaaaaacggttttttggcattttctcgagatttcatcatta
gttttttcagatattttgcacaaagacgtgtattagcaatgcccaaaaca
tggcaaagtccgatttttaagaaaaattcttttccggccgaaaatgccgg
aaatcgccgtttttgcagattttcatcggactttttccttataattggtt
gttttcttcactcaaaaacattgttaatagcaatgtccacgatcaagcat
ggttcaattgtcaataaaactgatttttgaagccggaactatctaaaaat
cgccagaactttctatttatttttcccctacaacccttctctctcccccc
atcaacaatcaatgatgaatttattgtgttatgcattttcgctaaacgct
atattttttgactgatttttttctcctcgtaTTGCTATCCAACCtacatc
atcaggtaggtccattcagcatctagcttgttttgtttttttgtcgatca
gcaaaaattctttaaaaaaagaatttggcTTGAACTTACAGTTACATGAT
TTTTGCCggaattcgccaaaataagtccTCTTAAGGCAACTTTCAAGCAA
GTATCTTGAAGCTAACCTGagcttttaaagattttaaacacAAGATTTGT
CaatagaattttttaatggTAATATATCTGAATTTTAAGTATAATTTATT
ATTGCATGCATTCCGTTGTCTTTCTATTTGTtaattattttatctttttc
taaacaatttttgtatgtagattttcttttgtaatttgaaatagCAGTTT
TTATTATTAAGAGCGGTCTTTGGTCAGGACACTGAAACTGTAGTGCCGTa
aattttttaacgattttttgcTCGCTCCATTGGCTTCAGTTGGGTGGTAA
ATTTTTAGTGATAATTTATCTTGAATATTATTTGTCTATTTTATAGTTTC
AtgttcttttgaaatattttacgaaTAGTCTGTTTTATGGCATATAAGGA
TATTTTGTCCTTCATATTTCTGCTTTGTCTTTATGATGTAATGATATTTT
AACTATGGAAGGAACAACCAATCTTTGGCCTGTGAATTCCTATGATTCTT
AGTAAAACATCCTATTTTTCCCTAATTCTTCAACAAAATCAATTATTGAT
aaagtgttttgaaaaaatttcaacgtaag
Run BLAST on NCBI

protein sequence of TCONS_00042502-protein

>TCONS_00042502-protein ID=TCONS_00042502-protein|Name=TCONS_00042502-protein|organism=Clytia hemisphaerica|type=polypeptide|length=264bp
MKEMKCFLLVLLNVLVATSELCDEKSIPSKNSTMIFQSFCNNSNGVIQAR
KCNASDVIIGLDLSDCGIKEMIDIPTEIKENLIWIALNDNKFTLKSSIPH
LRSALKIQILVTDEVNCTGFEIKTIQNGLTVCSSPLNRCEVKANSSQSYS
CLEHSNCGYDGPGLFSCNCDKEWQSYKCLKQDGFPKEKWLISIAATTIAI
IIGIRLLQFKARKRGDEYKKLAKLSNTDYANPEGSRQGIXNWQNFRILIM
LTLRGVVKEFLIRS
Run BLAST on NCBI

transcript from alignment at sc0003460:61..6751+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042502 ID=TCONS_00042502|Name=TCONS_00042502|organism=Clytia hemisphaerica|type=transcript|length=6691bp|location=Sequence derived from alignment at sc0003460:61..6751+ (Clytia hemisphaerica)
taGATAAAAGagattaaaaaatgaaagaaatgaaatGTTTTCTTCTGGTT TTGCTGAACGTTTTGGTTGCTACCTCAGAATTATGTGATGAAAAATCAAT CCCATCAAAGAATTCTACAATGATATTTCAATCATTTTGTAATAATAGCA ATGGTGTTATTCAGGCTCGTAAATGCAATGCCAGTGATGTCATAATTGGG TTTGTGTAGTTACCAACTCAAAGTGTCTTCTTGCAGGTTTAACACGTTTC AAAGAAAAGTACTGTTTTGCATCAGTTTAACCATTTTCTAAATGTTACTT ACAGTACATTAGaataatttttataatcttttacATTTACATTTCAGATT GGATTTGAGTGATTGTGGAATCAAAGAAATGATTGACATCCCAAcagaaa taaaagaaaacttgATTTGGATGTaagataattattattattagggGGTg atcggtactaaaatctcatgcatatatgagtactaaaaaggttttcaaga attttttgcataTCACCACCCCATTTTCAtggcgtcctccagctttttgg tcccccctaataagagctaaaatcccccatctggccttttccccccacct gtctttaaaatttgtgctcccccaattgggaaatccccctagccgtattg tataagggttgcgaagtgatgatccagactTGCCTCAATTCCCAAGCTat tatagcaaaaaaaagactctcaaaatccctagaaagacaggcttataagc ctgaatgcccaaacacaccaggaaggtctgtatttatcctattattcccc cactaggtagaggactgaatataccccctattcgcctttctcccccccat caagcttgaaaatttcacttcccccctggcaccaaaatctgatccccccc ccccccccccctggggggGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccccccc cccccccctgagggAACTCAACAATTCTTTCATTTACACCATATAGGTAA CATTAtgcttaaaaactcaaaaaatcatTGTTACTCTGGATTAAGAAGTC ATCATGAAAGCTAAATATTTTGTAGCCTGTAGCCTTCAATTTTTTCATga caattttcttgttttttttagtGCTCTGAATGATAACAAATTTACATTGA AAAGCAGCATTCCACATTTGCGATCtgctttaaaaattcaaatattgtAA GTATAGTTTTGCTATGGTGTTCACCAAAGTGATCAAAATCAATAAATCCA ATAAAAGTGTTACTCAGAGTAACCttgtaaaaattatattttaagtgCTT ATGCTATGATGTGGAAACATTGTCTTTGTATTAAAGGAATCCCATTAAGA TGGGTTTCCATATGTTAGCAAAAAGAAGTGCACCTTTAAGAGTTCAAAAT ACAGACTTTAGATACATTTGTGCTTGGAATTCAATTTCCTAGATTTCAAT TCCGCCTGATCATTGATCTCCATTGAAGtccaaattgttttcttttgata GGGTAACAGATGAAGTGAACTGTACAGGATTTGAAATCAAAACCATCCAA AATGGTCTAACTGTCTGCTCCTCACCACTCAATCGATGTGAAGTGAAAGC TAACAGCAGCCAATCATGTAGTTATTGTCTAAAAATCATGACACTTGCTG TGTATATGGctaaatcttctttaaaaagtGTCTTTAAAATCAtaattgaa aattataattgcctTGGTTTACTCTAAGGGGGTGTTGTACCCCTTATAAA CGCTCTGAAAATTTAATTGCTGTCTTAGTATTGTGATGTAACTACCCACC CTCCTCCATCCATCCATGGACCTTTAACTTCTGATTTTGTATGTATTGTA GTGTTGAGTataaagaaatttgaatgaatcaTTGCAACTTGTTTCTTTTG GTTTAACAAATTGGAATGAATATTATATAGAATTGACAACcttgtatttt ttctttcagattCTTGTTTGGAACACTCTAATTGTGGATACGATGGTCCA GGTGTTCTTataataaacttcttttaattatttcacATTTTTAATTACTA TTAATTTATTATTGCTTCATAACTAGATCTTTTAAAGTACAAATGAAATA TGTTGACGTATTCaaagttgttttttgaaataatacaATGAATATCATAA TAATGTTGTAGAatatttgttttaattaaaaCAACTTCTCTATTTTCAGG TCTTTTCTCATGTAATTGTGACAAAGAATGGCAAAGTTACAAATGTTTGA AACAAGTACGTTCCACACTTTTATTGTGTTATTTTATCTCTCTTAAAAAT GTTAATGTNAAATGTTTGAAACAAGTGCGTTCCACACTTTTATTGTGTTA TTTTATCGTGTTATTTTATCTCTCTGAAaaatgttaatgtatatatgTCA AACGTGTATAAATGTGTTCTAGCTGTAAAAGCTAGTGTCACTGACATCTA TAACTAAGTTTATTGCTTTGAATTTCCAGCGCCTGAAATAACCATTTTAG CTAGATAGAGCAAAGTTTTTGATCAAATCATCGGATTGCTTTACCTTGAA TATAATGAATTTTGAGTCAGACAAGAAGGATTTTGGGTTTGACACTGTGA TGTCTTACCTTTATTCTTGAGCTCTGAATTTCGTAATGCCTCCCTGGAAT TCTCTAAAATGTAATTGTCATGATAAATTTTCTTTGCAGTACCCTTATAT CCTGGCCTTTATCTTCAAACCTTTTTCTAGGATggatttccaaaagaaaa atggcTTATATCAATTGCTGCTACAACTATTGCTATCATTATTGGAATAA GATTGCTTCAATTCAAAGCGTAAATAAATTACATTCAACTCTTTGCATTC CTGAGAAAATTAAATATTTGTGATAAATAATTTTACGAATCACATTTCAT TACATTTCATGAAGGTAGCACTTAAATTTAAACTTGTAAAGTGCAATTAA TTGCATTCCTCAAGATATTTCTTATGTGGGAAGAGGGATGCCTTGTTAGC CATACACCTCAAATTATTAAAGTTAGTACCAATATTCCCGGataatttct atttttcattttagacGTAAACGAGGAGATGAATacaaaaaattggcaaa acttTCGAATACTGATTATGCTAACCCTGAGGGGAGTCGTCAAGGAATTT NAAATTGGCAAAACTTTCGAATACTGATTATGCTAACCCTGAGGGGAGTC GTCAAGGAATTTTTGATTAGATCTTGATGGGATAAAtaatcaaatatttc attttctgaCTACCTAAAGAGAACTTATTGGACCTACcatggaggtccta taaattaaccgatgtccgtccgttcgtccgtccgtctgttaccagctttt gtcgcgattagttttttctgatttttggcacaatgatgcaaaatggtaat gcccaaaatgtcacggagcccaattttcgaaaaaagatcatttccggccg aaaatgccggaaatatgccggaaaaaacggttttttggcattttctcgag atttcatcattagttttttcagatattttgcacaaagacgtgtattagca atgcccaaaacatggcaaagtccgatttttaagaaaaattcttttccggc cgaaaatgccggaaatcgccgtttttgcagattttcatcggactttttcc ttataattggttgttttcttcactcaaaaacattgttaatagcaatgtcc acgatcaagcatggttcaattgtcaataaaactgatttttgaagccggaa ctatctaaaaatcgccagaactttctatttatttttcccctacaaccctt ctctctccccccatcaacaatcaatgatgaatttattgtgttatgcattt tcgctaaacgctatattttttgactgatttttttctcctcgtaTTGCTAT CCAACCtacatcatcaggtaggtccattcagcatctagcttgttttgttt ttttgtcgatcagcaaaaattctttaaaaaaagaatttggcTTGAACTTA CAGTTACATGATTTTTGCCggaattcgccaaaataagtccTCTTAAGGCA ACTTTCAAGCAAGTATCTTGAAGCTAACCTGagcttttaaagattttaaa cacAAGATTTGTCaatagaattttttaatggTAATATATCTGAATTTTAA GTATAATTTATTATTGCATGCATTCCGTTGTCTTTCTATTTGTtaattat tttatctttttctaaacaatttttgtatgtagattttcttttgtaatttg aaatagCAGTTTTTATTATTAAGAGCGGTCTTTGGTCAGGACACTGAAAC TGTAGTGCCGTaaattttttaacgattttttgcTCGCTCCATTGGCTTCA GTTGGGTGGTAAATTTTTAGTGATAATTTATCTTGAATATTATTTGTCTA TTTTATAGTTTCAtgttcttttgaaatattttacgaaTAGTCTGTTTTAT GGCATATAAGGATATTTTGTCCTTCATATTTCTGCTTTGTCTTTATGATG TAATGATATTTTAACTATGGAAGGAACAACCAATCTTTGGCCTGTGAATT CCTATGATTCTTAGTAAAACATCCTATTTTTCCCTAATTCTTCAACAAAA TCAATTATTGATaaagtgttttgaaaaaatttcaacgtaag

Coding sequence (CDS) from alignment at sc0003460:61..6751+

>TCONS_00042502 ID=TCONS_00042502|Name=TCONS_00042502|organism=Clytia hemisphaerica|type=CDS|length=6360bp|location=Sequence derived from alignment at sc0003460:61..6751+ (Clytia hemisphaerica)
atgaaagaaatgaaatGTTTTCTTCTGGTTTTGCTGAACGTTTTGGTTGC
TACCTCAGAATTATGTGATGAAAAATCAATCCCATCAAAGAATTCTACAA
TGATATTTCAATCATTTTGTAATAATAGCAATGGTGTTATTCAGGCTCGT
AAATGCAATGCCAGTGATGTCATAATTGGATTGGATTTGAGTGATTGTGG
AATCAAAGAAATGATTGACATCCCAAcagaaataaaagaaaacttgATTT
GGATtGCTCTGAATGATAACAAATTTACATTGAAAAGCAGCATTCCACAT
TTGCGATCtgctttaaaaattcaaatattGGTAACAGATGAAGTGAACTG
TACAGGATTTGAAATCAAAACCATCCAAAATGGTCTAACTGTCTGCTCCT
CACCACTCAATCGATGTGAAGTGAAAGCTAACAGCAGCCAATCATattCT
TGTTTGGAACACTCTAATTGTGGATACGATGGTCCAGGTCTTTTCTCATG
TAATTGTGACAAAGAATGGCAAAGTTACAAATGTTTGAAACAAGATggat
ttccaaaagaaaaatggcTTATATCAATTGCTGCTACAACTATTGCTATC
ATTATTGGAATAAGATTGCTTCAATTCAAAGCacGTAAACGAGGAGATGA
ATacaaaaaattggcaaaacttTCGAATACTGATTATGCTAACCCTGAGG
GGAGTCGTCAAGGAATTTNAAATTGGCAAAACTTTCGAATACTGATTATG
CTAACCCTGAGGGGAGTCGTCAAGGAATTTTTGATTAGATCTTGAatgaa
agaaatgaaatGTTTTCTTCTGGTTTTGCTGAACGTTTTGGTTGCTACCT
CAGAATTATGTGATGAAAAATCAATCCCATCAAAGAATTCTACAATGATA
TTTCAATCATTTTGTAATAATAGCAATGGTGTTATTCAGGCTCGTAAATG
CAATGCCAGTGATGTCATAATTGGATTGGATTTGAGTGATTGTGGAATCA
AAGAAATGATTGACATCCCAAcagaaataaaagaaaacttgATTTGGATt
GCTCTGAATGATAACAAATTTACATTGAAAAGCAGCATTCCACATTTGCG
ATCtgctttaaaaattcaaatattGGTAACAGATGAAGTGAACTGTACAG
GATTTGAAATCAAAACCATCCAAAATGGTCTAACTGTCTGCTCCTCACCA
CTCAATCGATGTGAAGTGAAAGCTAACAGCAGCCAATCATattCTTGTTT
GGAACACTCTAATTGTGGATACGATGGTCCAGGTCTTTTCTCATGTAATT
GTGACAAAGAATGGCAAAGTTACAAATGTTTGAAACAAGATggatttcca
aaagaaaaatggcTTATATCAATTGCTGCTACAACTATTGCTATCATTAT
TGGAATAAGATTGCTTCAATTCAAAGCacGTAAACGAGGAGATGAATaca
aaaaattggcaaaacttTCGAATACTGATTATGCTAACCCTGAGGGGAGT
CGTCAAGGAATTTNAAATTGGCAAAACTTTCGAATACTGATTATGCTAAC
CCTGAGGGGAGTCGTCAAGGAATTTTTGATTAGATCTTGAatgaaagaaa
tgaaatGTTTTCTTCTGGTTTTGCTGAACGTTTTGGTTGCTACCTCAGAA
TTATGTGATGAAAAATCAATCCCATCAAAGAATTCTACAATGATATTTCA
ATCATTTTGTAATAATAGCAATGGTGTTATTCAGGCTCGTAAATGCAATG
CCAGTGATGTCATAATTGGATTGGATTTGAGTGATTGTGGAATCAAAGAA
ATGATTGACATCCCAAcagaaataaaagaaaacttgATTTGGATtGCTCT
GAATGATAACAAATTTACATTGAAAAGCAGCATTCCACATTTGCGATCtg
ctttaaaaattcaaatattGGTAACAGATGAAGTGAACTGTACAGGATTT
GAAATCAAAACCATCCAAAATGGTCTAACTGTCTGCTCCTCACCACTCAA
TCGATGTGAAGTGAAAGCTAACAGCAGCCAATCATattCTTGTTTGGAAC
ACTCTAATTGTGGATACGATGGTCCAGGTCTTTTCTCATGTAATTGTGAC
AAAGAATGGCAAAGTTACAAATGTTTGAAACAAGATggatttccaaaaga
aaaatggcTTATATCAATTGCTGCTACAACTATTGCTATCATTATTGGAA
TAAGATTGCTTCAATTCAAAGCacGTAAACGAGGAGATGAATacaaaaaa
ttggcaaaacttTCGAATACTGATTATGCTAACCCTGAGGGGAGTCGTCA
AGGAATTTNAAATTGGCAAAACTTTCGAATACTGATTATGCTAACCCTGA
GGGGAGTCGTCAAGGAATTTTTGATTAGATCTTGAatgaaagaaatgaaa
tGTTTTCTTCTGGTTTTGCTGAACGTTTTGGTTGCTACCTCAGAATTATG
TGATGAAAAATCAATCCCATCAAAGAATTCTACAATGATATTTCAATCAT
TTTGTAATAATAGCAATGGTGTTATTCAGGCTCGTAAATGCAATGCCAGT
GATGTCATAATTGGATTGGATTTGAGTGATTGTGGAATCAAAGAAATGAT
TGACATCCCAAcagaaataaaagaaaacttgATTTGGATtGCTCTGAATG
ATAACAAATTTACATTGAAAAGCAGCATTCCACATTTGCGATCtgcttta
aaaattcaaatattGGTAACAGATGAAGTGAACTGTACAGGATTTGAAAT
CAAAACCATCCAAAATGGTCTAACTGTCTGCTCCTCACCACTCAATCGAT
GTGAAGTGAAAGCTAACAGCAGCCAATCATattCTTGTTTGGAACACTCT
AATTGTGGATACGATGGTCCAGGTCTTTTCTCATGTAATTGTGACAAAGA
ATGGCAAAGTTACAAATGTTTGAAACAAGATggatttccaaaagaaaaat
ggcTTATATCAATTGCTGCTACAACTATTGCTATCATTATTGGAATAAGA
TTGCTTCAATTCAAAGCacGTAAACGAGGAGATGAATacaaaaaattggc
aaaacttTCGAATACTGATTATGCTAACCCTGAGGGGAGTCGTCAAGGAA
TTTNAAATTGGCAAAACTTTCGAATACTGATTATGCTAACCCTGAGGGGA
GTCGTCAAGGAATTTTTGATTAGATCTTGAatgaaagaaatgaaatGTTT
TCTTCTGGTTTTGCTGAACGTTTTGGTTGCTACCTCAGAATTATGTGATG
AAAAATCAATCCCATCAAAGAATTCTACAATGATATTTCAATCATTTTGT
AATAATAGCAATGGTGTTATTCAGGCTCGTAAATGCAATGCCAGTGATGT
CATAATTGGATTGGATTTGAGTGATTGTGGAATCAAAGAAATGATTGACA
TCCCAAcagaaataaaagaaaacttgATTTGGATtGCTCTGAATGATAAC
AAATTTACATTGAAAAGCAGCATTCCACATTTGCGATCtgctttaaaaat
tcaaatattGGTAACAGATGAAGTGAACTGTACAGGATTTGAAATCAAAA
CCATCCAAAATGGTCTAACTGTCTGCTCCTCACCACTCAATCGATGTGAA
GTGAAAGCTAACAGCAGCCAATCATattCTTGTTTGGAACACTCTAATTG
TGGATACGATGGTCCAGGTCTTTTCTCATGTAATTGTGACAAAGAATGGC
AAAGTTACAAATGTTTGAAACAAGATggatttccaaaagaaaaatggcTT
ATATCAATTGCTGCTACAACTATTGCTATCATTATTGGAATAAGATTGCT
TCAATTCAAAGCacGTAAACGAGGAGATGAATacaaaaaattggcaaaac
ttTCGAATACTGATTATGCTAACCCTGAGGGGAGTCGTCAAGGAATTTNA
AATTGGCAAAACTTTCGAATACTGATTATGCTAACCCTGAGGGGAGTCGT
CAAGGAATTTTTGATTAGATCTTGAatgaaagaaatgaaatGTTTTCTTC
TGGTTTTGCTGAACGTTTTGGTTGCTACCTCAGAATTATGTGATGAAAAA
TCAATCCCATCAAAGAATTCTACAATGATATTTCAATCATTTTGTAATAA
TAGCAATGGTGTTATTCAGGCTCGTAAATGCAATGCCAGTGATGTCATAA
TTGGATTGGATTTGAGTGATTGTGGAATCAAAGAAATGATTGACATCCCA
AcagaaataaaagaaaacttgATTTGGATtGCTCTGAATGATAACAAATT
TACATTGAAAAGCAGCATTCCACATTTGCGATCtgctttaaaaattcaaa
tattGGTAACAGATGAAGTGAACTGTACAGGATTTGAAATCAAAACCATC
CAAAATGGTCTAACTGTCTGCTCCTCACCACTCAATCGATGTGAAGTGAA
AGCTAACAGCAGCCAATCATattCTTGTTTGGAACACTCTAATTGTGGAT
ACGATGGTCCAGGTCTTTTCTCATGTAATTGTGACAAAGAATGGCAAAGT
TACAAATGTTTGAAACAAGATggatttccaaaagaaaaatggcTTATATC
AATTGCTGCTACAACTATTGCTATCATTATTGGAATAAGATTGCTTCAAT
TCAAAGCacGTAAACGAGGAGATGAATacaaaaaattggcaaaacttTCG
AATACTGATTATGCTAACCCTGAGGGGAGTCGTCAAGGAATTTNAAATTG
GCAAAACTTTCGAATACTGATTATGCTAACCCTGAGGGGAGTCGTCAAGG
AATTTTTGATTAGATCTTGAatgaaagaaatgaaatGTTTTCTTCTGGTT
TTGCTGAACGTTTTGGTTGCTACCTCAGAATTATGTGATGAAAAATCAAT
CCCATCAAAGAATTCTACAATGATATTTCAATCATTTTGTAATAATAGCA
ATGGTGTTATTCAGGCTCGTAAATGCAATGCCAGTGATGTCATAATTGGA
TTGGATTTGAGTGATTGTGGAATCAAAGAAATGATTGACATCCCAAcaga
aataaaagaaaacttgATTTGGATtGCTCTGAATGATAACAAATTTACAT
TGAAAAGCAGCATTCCACATTTGCGATCtgctttaaaaattcaaatattG
GTAACAGATGAAGTGAACTGTACAGGATTTGAAATCAAAACCATCCAAAA
TGGTCTAACTGTCTGCTCCTCACCACTCAATCGATGTGAAGTGAAAGCTA
ACAGCAGCCAATCATattCTTGTTTGGAACACTCTAATTGTGGATACGAT
GGTCCAGGTCTTTTCTCATGTAATTGTGACAAAGAATGGCAAAGTTACAA
ATGTTTGAAACAAGATggatttccaaaagaaaaatggcTTATATCAATTG
CTGCTACAACTATTGCTATCATTATTGGAATAAGATTGCTTCAATTCAAA
GCacGTAAACGAGGAGATGAATacaaaaaattggcaaaacttTCGAATAC
TGATTATGCTAACCCTGAGGGGAGTCGTCAAGGAATTTNAAATTGGCAAA
ACTTTCGAATACTGATTATGCTAACCCTGAGGGGAGTCGTCAAGGAATTT
TTGATTAGATCTTGAatgaaagaaatgaaatGTTTTCTTCTGGTTTTGCT
GAACGTTTTGGTTGCTACCTCAGAATTATGTGATGAAAAATCAATCCCAT
CAAAGAATTCTACAATGATATTTCAATCATTTTGTAATAATAGCAATGGT
GTTATTCAGGCTCGTAAATGCAATGCCAGTGATGTCATAATTGGATTGGA
TTTGAGTGATTGTGGAATCAAAGAAATGATTGACATCCCAAcagaaataa
aagaaaacttgATTTGGATtGCTCTGAATGATAACAAATTTACATTGAAA
AGCAGCATTCCACATTTGCGATCtgctttaaaaattcaaatattGGTAAC
AGATGAAGTGAACTGTACAGGATTTGAAATCAAAACCATCCAAAATGGTC
TAACTGTCTGCTCCTCACCACTCAATCGATGTGAAGTGAAAGCTAACAGC
AGCCAATCATattCTTGTTTGGAACACTCTAATTGTGGATACGATGGTCC
AGGTCTTTTCTCATGTAATTGTGACAAAGAATGGCAAAGTTACAAATGTT
TGAAACAAGATggatttccaaaagaaaaatggcTTATATCAATTGCTGCT
ACAACTATTGCTATCATTATTGGAATAAGATTGCTTCAATTCAAAGCacG
TAAACGAGGAGATGAATacaaaaaattggcaaaacttTCGAATACTGATT
ATGCTAACCCTGAGGGGAGTCGTCAAGGAATTTNAAATTGGCAAAACTTT
CGAATACTGATTATGCTAACCCTGAGGGGAGTCGTCAAGGAATTTTTGAT
TAGATCTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026329XLOC_026329Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042502-exon-sc0003460-1491911889:61..259TCONS_00042502-exon-sc0003460-1491911889:61..259Clytia hemisphaericaexon
TCONS_00042502-exon-sc0003460-1510915933:61..259TCONS_00042502-exon-sc0003460-1510915933:61..259Clytia hemisphaericaexon
TCONS_00042502-exon-sc0003460-1575043694:61..259TCONS_00042502-exon-sc0003460-1575043694:61..259Clytia hemisphaericaexon
TCONS_00042502-exon-sc0003460-1491911889:408..482TCONS_00042502-exon-sc0003460-1491911889:408..482Clytia hemisphaericaexon
TCONS_00042502-exon-sc0003460-1510915933:408..482TCONS_00042502-exon-sc0003460-1510915933:408..482Clytia hemisphaericaexon
TCONS_00042502-exon-sc0003460-1575043694:408..482TCONS_00042502-exon-sc0003460-1575043694:408..482Clytia hemisphaericaexon
TCONS_00042502-exon-sc0003460-1491911889:3232..3306TCONS_00042502-exon-sc0003460-1491911889:3232..3306Clytia hemisphaericaexon
TCONS_00042502-exon-sc0003460-1510915933:3232..3306TCONS_00042502-exon-sc0003460-1510915933:3232..3306Clytia hemisphaericaexon
TCONS_00042502-exon-sc0003460-1575043694:3232..3306TCONS_00042502-exon-sc0003460-1575043694:3232..3306Clytia hemisphaericaexon
TCONS_00042502-exon-sc0003460-1491911889:3612..3727TCONS_00042502-exon-sc0003460-1491911889:3612..3727Clytia hemisphaericaexon
TCONS_00042502-exon-sc0003460-1510915933:3612..3727TCONS_00042502-exon-sc0003460-1510915933:3612..3727Clytia hemisphaericaexon
TCONS_00042502-exon-sc0003460-1575043694:3612..3727TCONS_00042502-exon-sc0003460-1575043694:3612..3727Clytia hemisphaericaexon
TCONS_00042502-exon-sc0003460-1491911889:4070..4111TCONS_00042502-exon-sc0003460-1491911889:4070..4111Clytia hemisphaericaexon
TCONS_00042502-exon-sc0003460-1510915933:4070..4111TCONS_00042502-exon-sc0003460-1510915933:4070..4111Clytia hemisphaericaexon
TCONS_00042502-exon-sc0003460-1575043694:4070..4111TCONS_00042502-exon-sc0003460-1575043694:4070..4111Clytia hemisphaericaexon
TCONS_00042502-exon-sc0003460-1491911889:4310..4365TCONS_00042502-exon-sc0003460-1491911889:4310..4365Clytia hemisphaericaexon
TCONS_00042502-exon-sc0003460-1510915933:4310..4365TCONS_00042502-exon-sc0003460-1510915933:4310..4365Clytia hemisphaericaexon
TCONS_00042502-exon-sc0003460-1575043694:4310..4365TCONS_00042502-exon-sc0003460-1575043694:4310..4365Clytia hemisphaericaexon
TCONS_00042502-exon-sc0003460-1491911889:4841..4929TCONS_00042502-exon-sc0003460-1491911889:4841..4929Clytia hemisphaericaexon
TCONS_00042502-exon-sc0003460-1510915933:4841..4929TCONS_00042502-exon-sc0003460-1510915933:4841..4929Clytia hemisphaericaexon
TCONS_00042502-exon-sc0003460-1575043694:4841..4929TCONS_00042502-exon-sc0003460-1575043694:4841..4929Clytia hemisphaericaexon
TCONS_00042502-exon-sc0003460-1491911889:5175..6751TCONS_00042502-exon-sc0003460-1491911889:5175..6751Clytia hemisphaericaexon
TCONS_00042502-exon-sc0003460-1510915933:5175..6751TCONS_00042502-exon-sc0003460-1510915933:5175..6751Clytia hemisphaericaexon
TCONS_00042502-exon-sc0003460-1575043694:5175..6751TCONS_00042502-exon-sc0003460-1575043694:5175..6751Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042502-proteinTCONS_00042502-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003460supercontigsc0003460:61..6751 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.49823 6.09605 12.3462 14.2109 33.3509 22.4429 26.612 29.2865 29.5487 27.339 27.8656 24.2818 18.0906 17.1424 20.8529 22.1882 19.8048 21.2192 19.7182 24.992 26.0633 26.1649 23.5869 25.8933 11.9144 17.4459 45.073 34.9241 48.5578 36.861
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042502 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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