XLOC_026329 (gene) - C. hemisphaerica

Overview
NameXLOC_026329
Unique NameXLOC_026329
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003460:61..6751+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026329 ID=XLOC_026329|Name=XLOC_026329|organism=Clytia hemisphaerica|type=gene|length=6691bp|location=Sequence derived from alignment at sc0003460:61..6751+ (Clytia hemisphaerica)
taGATAAAAGagattaaaaaatgaaagaaatgaaatGTTTTCTTCTGGTT TTGCTGAACGTTTTGGTTGCTACCTCAGAATTATGTGATGAAAAATCAAT CCCATCAAAGAATTCTACAATGATATTTCAATCATTTTGTAATAATAGCA ATGGTGTTATTCAGGCTCGTAAATGCAATGCCAGTGATGTCATAATTGGG TTTGTGTAGTTACCAACTCAAAGTGTCTTCTTGCAGGTTTAACACGTTTC AAAGAAAAGTACTGTTTTGCATCAGTTTAACCATTTTCTAAATGTTACTT ACAGTACATTAGaataatttttataatcttttacATTTACATTTCAGATT GGATTTGAGTGATTGTGGAATCAAAGAAATGATTGACATCCCAAcagaaa taaaagaaaacttgATTTGGATGTaagataattattattattagggGGTg atcggtactaaaatctcatgcatatatgagtactaaaaaggttttcaaga attttttgcataTCACCACCCCATTTTCAtggcgtcctccagctttttgg tcccccctaataagagctaaaatcccccatctggccttttccccccacct gtctttaaaatttgtgctcccccaattgggaaatccccctagccgtattg tataagggttgcgaagtgatgatccagactTGCCTCAATTCCCAAGCTat tatagcaaaaaaaagactctcaaaatccctagaaagacaggcttataagc ctgaatgcccaaacacaccaggaaggtctgtatttatcctattattcccc cactaggtagaggactgaatataccccctattcgcctttctcccccccat caagcttgaaaatttcacttcccccctggcaccaaaatctgatccccccc ccccccccccctggggggGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccccccc cccccccctgagggAACTCAACAATTCTTTCATTTACACCATATAGGTAA CATTAtgcttaaaaactcaaaaaatcatTGTTACTCTGGATTAAGAAGTC ATCATGAAAGCTAAATATTTTGTAGCCTGTAGCCTTCAATTTTTTCATga caattttcttgttttttttagtGCTCTGAATGATAACAAATTTACATTGA AAAGCAGCATTCCACATTTGCGATCtgctttaaaaattcaaatattgtAA GTATAGTTTTGCTATGGTGTTCACCAAAGTGATCAAAATCAATAAATCCA ATAAAAGTGTTACTCAGAGTAACCttgtaaaaattatattttaagtgCTT ATGCTATGATGTGGAAACATTGTCTTTGTATTAAAGGAATCCCATTAAGA TGGGTTTCCATATGTTAGCAAAAAGAAGTGCACCTTTAAGAGTTCAAAAT ACAGACTTTAGATACATTTGTGCTTGGAATTCAATTTCCTAGATTTCAAT TCCGCCTGATCATTGATCTCCATTGAAGtccaaattgttttcttttgata GGGTAACAGATGAAGTGAACTGTACAGGATTTGAAATCAAAACCATCCAA AATGGTCTAACTGTCTGCTCCTCACCACTCAATCGATGTGAAGTGAAAGC TAACAGCAGCCAATCATGTAGTTATTGTCTAAAAATCATGACACTTGCTG TGTATATGGctaaatcttctttaaaaagtGTCTTTAAAATCAtaattgaa aattataattgcctTGGTTTACTCTAAGGGGGTGTTGTACCCCTTATAAA CGCTCTGAAAATTTAATTGCTGTCTTAGTATTGTGATGTAACTACCCACC CTCCTCCATCCATCCATGGACCTTTAACTTCTGATTTTGTATGTATTGTA GTGTTGAGTataaagaaatttgaatgaatcaTTGCAACTTGTTTCTTTTG GTTTAACAAATTGGAATGAATATTATATAGAATTGACAACcttgtatttt ttctttcagattCTTGTTTGGAACACTCTAATTGTGGATACGATGGTCCA GGTGTTCTTataataaacttcttttaattatttcacATTTTTAATTACTA TTAATTTATTATTGCTTCATAACTAGATCTTTTAAAGTACAAATGAAATA TGTTGACGTATTCaaagttgttttttgaaataatacaATGAATATCATAA TAATGTTGTAGAatatttgttttaattaaaaCAACTTCTCTATTTTCAGG TCTTTTCTCATGTAATTGTGACAAAGAATGGCAAAGTTACAAATGTTTGA AACAAGTACGTTCCACACTTTTATTGTGTTATTTTATCTCTCTTAAAAAT GTTAATGTNAAATGTTTGAAACAAGTGCGTTCCACACTTTTATTGTGTTA TTTTATCGTGTTATTTTATCTCTCTGAAaaatgttaatgtatatatgTCA AACGTGTATAAATGTGTTCTAGCTGTAAAAGCTAGTGTCACTGACATCTA TAACTAAGTTTATTGCTTTGAATTTCCAGCGCCTGAAATAACCATTTTAG CTAGATAGAGCAAAGTTTTTGATCAAATCATCGGATTGCTTTACCTTGAA TATAATGAATTTTGAGTCAGACAAGAAGGATTTTGGGTTTGACACTGTGA TGTCTTACCTTTATTCTTGAGCTCTGAATTTCGTAATGCCTCCCTGGAAT TCTCTAAAATGTAATTGTCATGATAAATTTTCTTTGCAGTACCCTTATAT CCTGGCCTTTATCTTCAAACCTTTTTCTAGGATggatttccaaaagaaaa atggcTTATATCAATTGCTGCTACAACTATTGCTATCATTATTGGAATAA GATTGCTTCAATTCAAAGCGTAAATAAATTACATTCAACTCTTTGCATTC CTGAGAAAATTAAATATTTGTGATAAATAATTTTACGAATCACATTTCAT TACATTTCATGAAGGTAGCACTTAAATTTAAACTTGTAAAGTGCAATTAA TTGCATTCCTCAAGATATTTCTTATGTGGGAAGAGGGATGCCTTGTTAGC CATACACCTCAAATTATTAAAGTTAGTACCAATATTCCCGGataatttct atttttcattttagacGTAAACGAGGAGATGAATacaaaaaattggcaaa acttTCGAATACTGATTATGCTAACCCTGAGGGGAGTCGTCAAGGAATTT NAAATTGGCAAAACTTTCGAATACTGATTATGCTAACCCTGAGGGGAGTC GTCAAGGAATTTTTGATTAGATCTTGATGGGATAAAtaatcaaatatttc attttctgaCTACCTAAAGAGAACTTATTGGACCTACcatggaggtccta taaattaaccgatgtccgtccgttcgtccgtccgtctgttaccagctttt gtcgcgattagttttttctgatttttggcacaatgatgcaaaatggtaat gcccaaaatgtcacggagcccaattttcgaaaaaagatcatttccggccg aaaatgccggaaatatgccggaaaaaacggttttttggcattttctcgag atttcatcattagttttttcagatattttgcacaaagacgtgtattagca atgcccaaaacatggcaaagtccgatttttaagaaaaattcttttccggc cgaaaatgccggaaatcgccgtttttgcagattttcatcggactttttcc ttataattggttgttttcttcactcaaaaacattgttaatagcaatgtcc acgatcaagcatggttcaattgtcaataaaactgatttttgaagccggaa ctatctaaaaatcgccagaactttctatttatttttcccctacaaccctt ctctctccccccatcaacaatcaatgatgaatttattgtgttatgcattt tcgctaaacgctatattttttgactgatttttttctcctcgtaTTGCTAT CCAACCtacatcatcaggtaggtccattcagcatctagcttgttttgttt ttttgtcgatcagcaaaaattctttaaaaaaagaatttggcTTGAACTTA CAGTTACATGATTTTTGCCggaattcgccaaaataagtccTCTTAAGGCA ACTTTCAAGCAAGTATCTTGAAGCTAACCTGagcttttaaagattttaaa cacAAGATTTGTCaatagaattttttaatggTAATATATCTGAATTTTAA GTATAATTTATTATTGCATGCATTCCGTTGTCTTTCTATTTGTtaattat tttatctttttctaaacaatttttgtatgtagattttcttttgtaatttg aaatagCAGTTTTTATTATTAAGAGCGGTCTTTGGTCAGGACACTGAAAC TGTAGTGCCGTaaattttttaacgattttttgcTCGCTCCATTGGCTTCA GTTGGGTGGTAAATTTTTAGTGATAATTTATCTTGAATATTATTTGTCTA TTTTATAGTTTCAtgttcttttgaaatattttacgaaTAGTCTGTTTTAT GGCATATAAGGATATTTTGTCCTTCATATTTCTGCTTTGTCTTTATGATG TAATGATATTTTAACTATGGAAGGAACAACCAATCTTTGGCCTGTGAATT CCTATGATTCTTAGTAAAACATCCTATTTTTCCCTAATTCTTCAACAAAA TCAATTATTGATaaagtgttttgaaaaaatttcaacgtaag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00042502TCONS_00042502Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00042502-proteinTCONS_00042502-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003460supercontigsc0003460:61..6751 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.5 6.1 12.35 14.21 33.35 22.44 26.61 29.29 29.55 27.34 27.87 24.28 18.09 17.14 20.85 22.19 19.8 21.22 19.72 24.99 26.06 26.16 23.59 25.89 11.91 17.45 45.07 34.92 48.56 36.86