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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042489 ID=TCONS_00042489|Name=TCONS_00042489|organism=Clytia hemisphaerica|type=transcript|length=1103bp
AccagaccagcttggagcccccggtGAGATGGAAAGCAGTGAGACGTTTC
TACAACTCGTGAACCACTTTGGTGCTGACGTAGACCTTCAGCCAAGtctc
aaaaatactttgaggggtccTTATTGAGCTCTGGGCCAAGCCAAACTAGC
GAAGGAATGACATCACTGAGAAATTTCGCCAGTGCATGTCCTGAAGTTGG
CCCAGTGGTATAAGGCGTTAGGTTCACGCACTAGGGATCCCCGGATCGAA
TCGGGTCAAGgtcacctttaaaatttttatacaggttttgatatttcatg
tttttttgggtgtaaattccgaaaaaataggtccgaatTCCTGAAAATTT
GACGGAAAGGCGCTACGGGACCGTAAAGGACCCGTACGGGACCGTAAATG
ACCCCctcccctagcgccggactgggtgggtctcacaacttgaaactttc
tggagatgTCAAGCATATCAAAAGGGAAAAGCATGCTAAATTTCATCACT
CCATCGTCACCGATCGCtgggctacgggccgcgaaaggtGTGCTGCAGGA
CGTCCCTGTAAGGACGATTgtcgggccgtacggcgtttttagTCGGTCAA
ACTTACCGTGCTAtaacttgtccccaggcccaaaaaatcaaaattttcat
gaaatgaaaaaaacacccccagatatatTCATCCAATGGACAAGTGTGCA
GAATTTCAGCCAAATGTGGCCATTTTTGACgtctccaggctgccagcctc
gttttggcgctaaaactcgtcccaaggcccaaaaaatcaaaatagaatAT
CTGAATTCTAACATACAGTTTACCTCTATGCGGGCAGTGCAGTATCTATG
GAATGATTTGGACTGATTTGATCaagttttttctaaaaactaACAACATT
CAGGGAGATGCACAATTCCTAAAACTGGTTAACTGTAGTTGGCGTATCAG
TTTAGGATATATTATATACGGACAATTACGCGAACTAGTTGGTGTATCAG
TTTTGATGTATTATATACAGACAATTACGCGAACTAATTGGCGTATCAGT
TTTGATGTATTATATACGGACAATTACGCGAACTTGTTGGCGTATCAGTT
TTG Run BLAST on NCBI transcript from alignment at sc0003456:5958..7060 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042489 ID=TCONS_00042489|Name=TCONS_00042489|organism=Clytia hemisphaerica|type=transcript|length=1103bp|location=Sequence derived from alignment at sc0003456:5958..7060 (Clytia hemisphaerica)
CAAAACTGATACGCCAACAAGTTCGCGTAATTGTCCGTATATAATACATC
AAAACTGATACGCCAATTAGTTCGCGTAATTGTCTGTATATAATACATCA
AAACTGATACACCAACTAGTTCGCGTAATTGTCCGTATATAATATATCCT
AAACTGATACGCCAACTACAGTTAACCAGTTTTAGGAATTGTGCATCTCC
CTGAATGTTGTtagtttttagaaaaaacttGATCAAATCAGTCCAAATCA
TTCCATAGATACTGCACTGCCCGCATAGAGGTAAACTGTATGTTAGAATT
CAGATattctattttgattttttgggccttgggacgagttttagcgccaa
aacgaggctggcagcctggagacGTCAAAAATGGCCACATTTGGCTGAAA
TTCTGCACACTTGTCCATTGGATGAatatatctgggggtgtttttttcat
ttcatgaaaattttgattttttgggcctggggacaagttaTAGCACGGTA
AGTTTGACCGActaaaaacgccgtacggcccgacAATCGTCCTTACAGGG
ACGTCCTGCAGCACacctttcgcggcccgtagcccaGCGATCGGTGACGA
TGGAGTGATGAAATTTAGCATGCTTTTCCCTTTTGATATGCTTGAcatct
ccagaaagtttcaagttgtgagacccacccagtccggcgctaggggagGG
GGTCATTTACGGTCCCGTACGGGTCCTTTACGGTCCCGTAGCGCCTTTCC
GTCAAATTTTCAGGAattcggacctattttttcggaatttacacccaaaa
aaacatgaaatatcaaaacctgtataaaaattttaaaggtgacCTTGACC
CGATTCGATCCGGGGATCCCTAGTGCGTGAACCTAACGCCTTATACCACT
GGGCCAACTTCAGGACATGCACTGGCGAAATTTCTCAGTGATGTCATTCC
TTCGCTAGTTTGGCTTGGCCCAGAGCTCAATAAggacccctcaaagtatt
tttgagaCTTGGCTGAAGGTCTACGTCAGCACCAAAGTGGTTCACGAGTT
GTAGAAACGTCTCACTGCTTTCCATCTCaccgggggctccaagctggtct
ggT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042489-exon-sc0003456-1491911889:5958..7060 | TCONS_00042489-exon-sc0003456-1491911889:5958..7060 | Clytia hemisphaerica | exon |
| TCONS_00042489-exon-sc0003456-1510915933:5958..7060 | TCONS_00042489-exon-sc0003456-1510915933:5958..7060 | Clytia hemisphaerica | exon |
| TCONS_00042489-exon-sc0003456-1575043694:5958..7060 | TCONS_00042489-exon-sc0003456-1575043694:5958..7060 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003456 | supercontig | sc0003456:5958..7060 . |
Blast
The following BLAST results are available for this feature:
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