TCONS_00042353 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042353
Unique NameTCONS_00042353
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length882

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042353 ID=TCONS_00042353|Name=TCONS_00042353|organism=Clytia hemisphaerica|type=transcript|length=882bp
CCTAGTTCATGACCCCTGCCTTACTTACTGAGTACTGATGCCACCCACCC
AACAGTTGAGTTGCTCAGTCTGTCAGCGGTATGTATCATGGTGGATCCTC
ACTCTTTCTGAGCAGGTAAGATTTATTGACCGAAAAAAAGACCGTAATCG
TAGGAATAAAGATTACCtaaagcaaacaaagaaaaagataAATGATTGGG
GTGTTTACTGTAAAGCAACTGTTGGATTTCTTCATATATACGAAGAGACG
CTTCATTATTTTGgcAATAATCCGCTGATGTCGAACTTTTTAAACGATCA
GAgagtaaaagaaattttaaaagaatattgTGAATTTACAGATGAGATGG
AAGAAAAGAAACCTGCTAATACATTTAATGCATCTTCGGAAAAAAGAAAA
GATTGCACTGATGTAGATTTTCCGAAAAAGGCAAAATTGACTGAAGAAGA
AAAGACAAATGACACTGTTCTATCCGAGAATTTTGAGAGAGGTAGAACTG
TTGCGAAAAGGCCTTGGAAATATGGCACATAGTACTCGTCTCTATTGAAA
CTAACTTTGCTTGGAAACAATTGAGTCTTGTGCTGCtactacatgttttt
ataaacaatgaaaaattcaaaatcggGCTCAGATATGCTTACTTCTAGAT
CTATCTAATAAGGTTCAATAAATGCTTCCAGTATGCTTAtcacaaaaaat
ataatttttttttatattcaaaattcgaatgtttattgTATGTATactca
aattcaaaagtttcaaatttaTTATATTCGAATATTTGCGAAAATATTTA
AATGGATGGGCAAGATCGAGCCGCTTTGTCTTTGTTTAGTGAAAACATAC
AGGCCAAAATACAGTGTTGTAAACTATTTTTG
Run BLAST on NCBI

protein sequence of TCONS_00042353-protein

>TCONS_00042353-protein ID=TCONS_00042353-protein|Name=TCONS_00042353-protein|organism=Clytia hemisphaerica|type=polypeptide|length=164bp
MPPTQQLSCSVCQRYVSWWILTLSEQVRFIDRKKDRNRRNKDYLKQTKKK
INDWGVYCKATVGFLHIYEETLHYFGNNPLMSNFLNDQRVKEILKEYCEF
TDEMEEKKPANTFNASSEKRKDCTDVDFPKKAKLTEEEKTNDTVLSENFE
RGRTVAKRPWKYGT
Run BLAST on NCBI

transcript from alignment at sc0003361:609..12341+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042353 ID=TCONS_00042353|Name=TCONS_00042353|organism=Clytia hemisphaerica|type=transcript|length=11733bp|location=Sequence derived from alignment at sc0003361:609..12341+ (Clytia hemisphaerica)
CCTAGTTCATGACCCCTGCCTTACTTACTGAGTACTGATGCCACCCACCC
AACAGTTGAGTTGCTCAGTCTGTCAGCGGTATGTATCATGGTGGATCCTC
ACTCTTTCTGAGCAGGTATGGTATTTAAATTTAGTCTTTCGTTCGAGGAG
GACATtggaccaacttacggtagctATCAATTATCGATTTTGATCGGTAT
CTAATCGACCGATTAATATCCATTAGCTATGGTTTAAGCTTAACATTTTG
ATTCGATTTAcgttcaatagaccttttttcaaagaggccaccctgttgaa
taattttgtagtccagcagaaaaacaatgatatacaCCCATGCATAacta
ttacaatatgcatgaaacagtaattatgcattgctgtatcattgtttgtg
tggctggactacataattattcaacagggttgcctatttgaaaaaaggtc
tattgaattcgaattgagaaaaaattgaTTGACATCAGGTCGAGTTCAGT
TTAGCTGCTTGTCTTTCAGCCCCCTTTTCCACCCGCACCTTTCCACGCCA
CCTGCACCTTTCCACGCCACCTGCACCTTTCCTTCCGTGCGTCTGCTCTT
TGCTTGCTGTGTACAgcgaaaagataaaaattaccCGGAATTTGAAACCA
ATGATCCAATCAATCTACCCAATTGGATAAATGGATTGGTTGGGTAGATT
GATTGAATAGGTAGATTGATAGGATCATCGGTAGATTGATAGGATCATCG
GTAGATTGATAGGATCATTGGTAGATGGCTTGGATCACCGGTAGATGAAT
TAGATCATCGGTAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNAAGAACttcttaaaaatacaaaaatcgggtttttcgggaaaaacc
gggtccaaaaatcgggaaatctggaaaattgtgtgaaaaaacctcaataa
atattgaaaatatgacAAACTAACGCTTATTAATAACATGGCAGGTTGAC
AAATCTAATTCTAAACTTCTGAAAGCTTCTGAAAGCCAAAATAATGGTAA
GGATCTGGTTCTTCAGAAAAATCGGATTTTtgaaatcggaaaatcgggaa
aatgtTACAAAACTAAACTTCTCCTTAAGAATTTTACAAAAGTATTTCAG
AAAGTGCTAGATATAAAATGTTCACAAATTTTGAACTTCTGTTAAGTAAA
GTAACGTTAGAAAGTTATGAAatagattttcggggaaaatggGCTCACAT
AATCGGGAAATTGGACACACAGAATCGGAAAATTGAGAAATGTAAGATAT
tatgcttttttttaaatgctttaaaaattcatGAGGTTTCTCAATGTTTA
AGTTTGTGAACTTTGCTCTTTGAAGGCCAATTGGAAAATCGGAATAAACG
TTAGAAATAGCTTGTGGAGTatgaaaatcggggaaacttttCAAGAAGCT
TAAATGTAGTAAAAATATGTAATACTAAGTTTTGATATcataaaatctat
taaaaaatctaaacaagTGTTTCTAGAATGTCAAAGATATTCCTCTCACT
CATCAAGGGCTCCTCAGTTTCATTATCTGAATCTGGTGGTGGAGCTTTTG
AGTTTTCACACCCTTCACCATGACACCCACCACATGCAGCAACACAATAA
AGCCCATTGCGACGACACGAACATAAATTTGAGCTGCATGATCGGCGGGA
ACTTGTTTTGCAATTGCATCGTACTACTTTAAGAAGCCACTCTGGTGCAG
CATCTAAGTCTGTCATTATCGGTTCGATTTTGTTCGGTTTTTCTACGGAT
TTGAACCCCCATTCTGTAGGAATCAAACATCGAAGATTCAAATGTTTCCA
TTGCGCAACCTAAATAAAGTGAACGAAGAACAATAAATTACGAATAAAAG
GTTGAGCTCCTTTCTTTTACAAGTTGCTGGTCGTTTTTTAGTTTGTTCTA
ATTACCTGTAGATGGACTCTCAGCGCATGAAAGTAAGTTGCTCGCTCGGT
TGGTGGAAGATTCTCGGGCTGAACAGAGGCTGATGTTGATACCATCTCCA
TGTATTTCTTGTACCGCATTTGGGCTAGCGTATCTGAGGCTTTAGcacca
aaactgaaaaaataaacaaagaataGTTTAGTTTTTAACCTTTCCAAAGA
AACGATTAAACATTTCTGAACCATGATACACGGAAGAAGGAATATCTTCC
CGGATCATAACATAATTACCTCTTTAACATGATTTCAATTCCAGCTGCTC
CAATCTTCTCGTTGTCCATTTCCGTATTTCCAAAACATCTAGCTAATTCA
CGGATGGGTTCCGACTTCAAAGttgtcaaaatctttgttttccctAAAGA
ACAAAAACCTGTTGTTTTTAGGAGTTCTTAGTGGTGAAGGTACATTTCCT
GGCGAAAGCAAAAAACAACAGTTATTGAATTTTGCTGTAATTCTCCTATC
ATGTTATAAAATCATCGTCATCAGCTGCTAAATGcaagaaaatcatccta
aaataatCAGAAtgtaattttattgaaaagaaagaactTTATACCTTTTT
GATGTATGGCGGAAGTTGTATCACATCCAGACCATGCATGAGCAAATAAC
AACGTATCACAATGATCGTAAGTAGCTGAAATCTGACTGATTTTCCAGTA
AAACAGCTTGGGTTTTATTTTCGCTTTATTCTTCTGGTCGCCTATCTTGT
CAGTACTGAAGAACATTTCTCCCATTCCCACCTTCCAATGATACATCATC
AATATGAAAATATCGGTGTCGTCTGCTGTTATTACGACGTTTCTTCCTGC
TTTGGCATAGGATAGTCCTTTTTCCACAATCAACACATCTGCATCACCGT
CACTTTGGTCTGTCAGGAATCCTTGCTTCTTGAAAGCAGATGAAAGCATT
TTGATCAATTGAACTTTGTTGGATGGGTTAGATAAGAACAATTCTCTGTT
GGTAGTCACTTTACCATCTAGTGAGATGGAAACAGAAGCTGATGTTTTTC
CCGATCGTCGATCGTGTTCTTGTCCTTTTGTTGACATGTCATCCTCGTAt
ccatcgaaaacaacaacGACAGTAGAGTAGCATTTGAAGTTGTTCTTGAG
AAAGTTGACATACCCGTCGATCACCGCTGAATATGTTGTTTTCGGCCACG
AGACTTTGTGTAGCAAAGCACCACCATCAACGATGCATACATCGTGTGTT
TCTAACTGGCATGCGTTTGCTTTGTTGATGAAGTGGTTACGAAGGTTCGA
CTTTTGAGGTTTTCGCATCATTCCAAGCTTGAATAGTGATGTAGGCTCGG
GGGTTAGCTCATAACAGAAATTTTCAGCAACATCCTCAGTGAAGTTTCCG
AGAGCTGTGAGTCAACTAAACAATATTGTTGGACTTATAATAACTTTGCT
GTCCCCAATCTTGATTGCTGGAAACATGTCTTCGAAGGTTTTTGCTTTCT
CCTTCCGTCGAATCTTGACCTCCTCGAACACAACGTCGTCTTGCTTCTTT
TGAATCCCTCTCCCTACGTCTTCGGCGGCATCACAGTTAGTCTCTGGCCC
AGCGATCAGTCCACTCGAGAGACTCTTCAATTCAGGCTCTGTTTTGTCAA
AAGGTTCGTGGTTGTCAAACCAATCCTTCACGCTAGCGAAATCTTTATCG
TCACGCTTCATTCTGCTCAACGAAAGATTGACATGTTGCTCGCTCGTTTT
ACGGCATGCACCGGTGAGGGCTGACATAGCGTTGTGGACGTCGGCAGATC
TGTGGATGCTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtccggtgtagaa
attgtccggtggtaaaaaaaattctcttttacaccggattttcgcgtgtc
cggtgttcgttaagtccggtgcgtcggcagggtcctgtctAACCCTCGTc
caattccgacacccttctttagagaaagcaAGAAAGGAATAATATTAAAG
TTTGAATCACtaattgaaaaaggattattcctctctgaccactaagcaaa
gatgACAATCAGGCATTCACTCAAtcaaaaagtaaattttctctTTCACG
CAAGTTTTTAATTCCCGCATTCACagatttgtttttcaattttcacgcgt
tcacgcaaccaaaaaaaaacacattcaCAAACTGCTGGGGACCCCTTAAG
CCACACGAGATAAAAACATTAACTAAAGGGCCTCCTTATCCATTGAATAT
TTGTGAAGGTACTGTCTAATTTTGGTTATCAAGGATAAAGTGAATAGAAA
AAAGNCTATCCATTGAATATTTGTGAAGGTACTGTCTAATTTTGGTTATC
AAGGATAAAGTGAATAGAAAAAAGTTAGTAATACTAATAGTGTAATAACT
TTTCCTTCTTAGGCTATGCAAGAAGTTACAACTCCACTTTAACCTAAACT
AACAACCCATCATGTCATACGTTATTCAAAGTCTATCTGCATGGATTTTA
TCCTTGTCTTAGCAGTTAAGCAATACCTTTTGGGTAAgaacaattttgaa
attatttgaagCTTATTATTGCTgtaagttttttcattttgggctttttt
ctctCATGTTCGGTCATGTACAAAATTCTAATGTTTATGATCAATAATTA
TGCATTCTATTTCATAAAATGTCAAGTCATTTTTACCAATTAGAAGGCAT
TCTTGAATTTCAGATTACTTTTATATACACAGATGTGTTTATCTACCTAC
CTacctatctatctatctatctatctatatattcaAGTAGTGACAACACA
TACATGTTCGATAGAAAAAAGTGTGCAGAGCAGAGTGTCTGAATCTTATT
GGAAATATAAAGCTTCTTAAAATGACAGGATAGTGATTTTAATCTTTTAT
TCATATTTCAatggaaaaagttccagtgTGGATGGAAAGTGGTTGCCTTG
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGCTCTTAGTAT
gttaatctacataaaattccgcttccaacggtaccaagaaacctagtgcg
gaaattttttcaaggtcAAATCCTATTTTAGCCAGACTAATTGGTAGATG
GATTGATGCGGTAGAttgattggatcatgggtagattgattggatcatgg
gtagattgataggatcatgggtagatggattggatcatgggtagattgat
ttgatcatgggtagatggattggatcatgggtggatggattggatcaccg
gtagatggattggatcaccggtagatggattggatcaccagtagatggat
tggatcatgggtagatggattggatcatgggtggatggattggatcaccg
gtagatggattggatcaccggtagatggattggatcaccagtagatggat
tggatcatgggtagatggattggatcaccgGTAGATTGATTGGTttatgg
gtagatggattggatcgtgggtagatggattggttcatgggtagatcgat
tggatcatgggtagatggattggatcataggtagatggattggatcatgg
gtaggtggattggttcatgggtagatgaATTGCTTCATGGGTAGATGAAT
CGGATCActggtagatggattggatcaccaGTAGAttgattggatcatgg
gtagattgattggatcatgggtagattgataggatcatgggtagatggat
tggatcatgggtagatggattggatcaccggtagatggattggatcatgg
gtagatggattggatcatgggtagatggattggatcaccgGTAGANagat
ggattggatcatgggtagatggattggatcatgggtagatggattggatc
accgGTAGATTGATTGGTttatgggtagatggattggatcatgggtagat
ggattggatcaccgGTAGATTGATTGGTttatgggtagatggattggatc
gtgggtagatggattggttcacCGGTAGATTGATTGGTTCACGGGTAGAt
tgattggttcatgggtagatggattggatcataggtagatggattggatc
acccGGTAAATGGATAGGATCACCGGTAGATGggttggatcatgggtaga
tggattggttcatgggtaggtggattggttcatgggtagatggattgctt
catgggtagatggatcgGTTCGTGGTGTAGATGGGTTGGATCTAgggtaa
gtaagtaagtaagtcttcgaccgcagtcggaggcgacccaaaggcacctc
tttcgatagctatctacccgaaggtagggcagggcgccactctttctccc
tggatctctccacttacccttgatgcttcctttagttgctgagcatcaag
cagagaggcatcaagtaccattttggaaatctttggtatgacccggctgg
gggttgaacccacaaccttgcgaactgTAGCCGGATGCcttaccactgta
ctacggtcaaGGGTAGATGGgttggttcatgggtagatggattggatcaa
gGGTAGATGGgttggttcatgggtagatggattggatcatgggtagatgg
attggatcatgggtagatggattggttcatggtgtagatggattggttca
tggtgtagatggattggttcatggtgtagatggattggttcatggtgtag
atggattggttcatggtgtagatggattggttcatggtgtagatggattg
gttcatggtgtagatggattggttcatggtgtagatggattggttcatgg
tgtagatggattggttcatggtgtagatggattggttcatggtGTAGATC
GATTGGATCATGGTGTAGATTGATTGAATTATCGGTAGATGGATAAGTTG
GGTAGAAGGATGGGATGTGTAGATGGATTGATTGAATCGGTGGATGGATT
GGACCGGGGGTACTCGATCTGAAAACTATGTTTGGCGGAAAATTTGGCTC
CCAAAGTCGAACCCTAACAGTTCAGAGAAAGTTTGGTCAAAAATTGACCC
TTACAGTTAGAGAggatttttcccaaaatcttagaattgaatatatttaa
ttACTTTATTTATATTCATAACATTTTTAGTCATTTGAGAATTGCTTTTA
TTTCGTAactttgattataaatgatagTTTTTAGCttgtaccgggtgcgc
cacaaaaatgtttctctctttgaaactaattttctcgaaatctaaaaatt
ttaaaagaaccattcttatttcattggaaagaagaaagatagacttaaat
tttgatgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGA
CAAATAGACCTTATTCAATGATGTTCAAATTGCTTTCCAGGTAAGATTTA
TTGACCGAAAAAAAGACCGTAATCGTAGGAATAAAGATTACCtaaagcaa
acaaagaaaaaggtaTTAGTTTTGTTAAATTTTGGTTATTTGTATTTTCC
TTTTTAGCTATAATGCAAGAAATAATACAATGATATCTAAATACTCGAAT
GTTACCGTCTCTATGTGTTTTCGTGTATTTTATTGGTTTTAcggagaaaa
gaaaaaaatagctaacaacaataacaacaactAGAACAACAACAGAAAGT
CGGTAACTAAGAATTAAGAACCtagctttaaaaaattttccattgttttt
ttttacagataAATGATTGGGGTGTTTACTGTAAAGCAACTGTTGGATTT
CTTCATATATACGAAGAGACGCTTCATTATTTTGGTAAAATAATAATCTT
TTCTCTTGAATCTTATAGACACAGATGTCATAATGCAACTGTGTTGATAA
ATCATAAGTATTAGTTTAATGATAAAGTTTTCGTGAACGACAAGAGGCTt
ataatgtttatttttatttaggcAATAATCCGCTGATGTCGAACTTTTTA
AACGATCAGAgagtaaaagaaattttaaaagaatattgTGAATTTACAGG
TATCTCTTGATTTATATAAGTTAGAATGCGCATTTATGTTTATCCTTTAC
ACAAATGCTTTAAATACCAATCAaggaaaaacaacaacattttaGGAGAT
TGATGTAGATAGAGaatacgaaaaaaaaaaagaattttccgttTCTAGAT
GAGATGGAAGAAAAGAAACCTGCTAATACATTTAATGCATCTTCGGAAAA
AAGAAAAGGTCAGGATATGATTTTTTAGAATCACGTTTCCATTATGGTAC
ATGATATCTATCCATTGACTCCTATTATCTACTTGTCATTGTTCGTTATA
TAATTGATAAATTTGATGTGTCGTTGAATTACATTTTTATACTATTTTTT
AGATTGCACTGATGTAGATTTTCCGAAAAAGGCAAAATTGACTGAAGAAG
AAAAGACAAATGACACTGTTCTATCCGAGAATTTTGAGAGAGGTAGAACT
GTTGCGAAAAGGCCTTGGAAATATGGCACATAGTACTCGTCTCTATTGAA
ACTAACTTTGCTTGGAAACAATTGAGTCTTGTGCTGCtactacatgtttt
tataaacaatgaaaaattcaaaatcggGCTCAGATATGCTTACTTCTAGA
TCTATCTAATAAGGTTCAATAAATGCTTCCAGTATGCTTAtcacaaaaaa
tataatttttttttatattcaaaattcgaatgtttattgTATGTATactc
aaattcaaaagtttcaaatttaTTATATTCGAATATTTGCGAAAATATTT
AAATGGATGGGCAAGATCGAGCCGCTTTGTCTTTGTTTAGTGAAAACATA
CAGGCCAAAATACAGTGTTGTAAACTATTTTTG

Coding sequence (CDS) from alignment at sc0003361:609..12341+

>TCONS_00042353 ID=TCONS_00042353|Name=TCONS_00042353|organism=Clytia hemisphaerica|type=CDS|length=2970bp|location=Sequence derived from alignment at sc0003361:609..12341+ (Clytia hemisphaerica)
ATGCCACCCACCCAACAGTTGAGTTGCTCAGTCTGTCAGCGGTATGTATC
ATGGTGGATCCTCACTCTTTCTGAGCAGGTAAGATTTATTGACCGAAAAA
AAGACCGTAATCGTAGGAATAAAGATTACCtaaagcaaacaaagaaaaag
ataAATGATTGGGGTGTTTACTGTAAAGCAACTGTTGGATTTCTTCATAT
ATACGAAGAGACGCTTCATTATTTTGgcAATAATCCGCTGATGTCGAACT
TTTTAAACGATCAGAgagtaaaagaaattttaaaagaatattgTGAATTT
ACAGATGAGATGGAAGAAAAGAAACCTGCTAATACATTTAATGCATCTTC
GGAAAAAAGAAAAGATTGCACTGATGTAGATTTTCCGAAAAAGGCAAAAT
TGACTGAAGAAGAAAAGACAAATGACACTGTTCTATCCGAGAATTTTGAG
AGAGGTAGAACTGTTGCGAAAAGGCCTTGGAAATATGGCACATAGATGCC
ACCCACCCAACAGTTGAGTTGCTCAGTCTGTCAGCGGTATGTATCATGGT
GGATCCTCACTCTTTCTGAGCAGGTAAGATTTATTGACCGAAAAAAAGAC
CGTAATCGTAGGAATAAAGATTACCtaaagcaaacaaagaaaaagataAA
TGATTGGGGTGTTTACTGTAAAGCAACTGTTGGATTTCTTCATATATACG
AAGAGACGCTTCATTATTTTGgcAATAATCCGCTGATGTCGAACTTTTTA
AACGATCAGAgagtaaaagaaattttaaaagaatattgTGAATTTACAGA
TGAGATGGAAGAAAAGAAACCTGCTAATACATTTAATGCATCTTCGGAAA
AAAGAAAAGATTGCACTGATGTAGATTTTCCGAAAAAGGCAAAATTGACT
GAAGAAGAAAAGACAAATGACACTGTTCTATCCGAGAATTTTGAGAGAGG
TAGAACTGTTGCGAAAAGGCCTTGGAAATATGGCACATAGATGCCACCCA
CCCAACAGTTGAGTTGCTCAGTCTGTCAGCGGTATGTATCATGGTGGATC
CTCACTCTTTCTGAGCAGGTAAGATTTATTGACCGAAAAAAAGACCGTAA
TCGTAGGAATAAAGATTACCtaaagcaaacaaagaaaaagataAATGATT
GGGGTGTTTACTGTAAAGCAACTGTTGGATTTCTTCATATATACGAAGAG
ACGCTTCATTATTTTGgcAATAATCCGCTGATGTCGAACTTTTTAAACGA
TCAGAgagtaaaagaaattttaaaagaatattgTGAATTTACAGATGAGA
TGGAAGAAAAGAAACCTGCTAATACATTTAATGCATCTTCGGAAAAAAGA
AAAGATTGCACTGATGTAGATTTTCCGAAAAAGGCAAAATTGACTGAAGA
AGAAAAGACAAATGACACTGTTCTATCCGAGAATTTTGAGAGAGGTAGAA
CTGTTGCGAAAAGGCCTTGGAAATATGGCACATAGATGCCACCCACCCAA
CAGTTGAGTTGCTCAGTCTGTCAGCGGTATGTATCATGGTGGATCCTCAC
TCTTTCTGAGCAGGTAAGATTTATTGACCGAAAAAAAGACCGTAATCGTA
GGAATAAAGATTACCtaaagcaaacaaagaaaaagataAATGATTGGGGT
GTTTACTGTAAAGCAACTGTTGGATTTCTTCATATATACGAAGAGACGCT
TCATTATTTTGgcAATAATCCGCTGATGTCGAACTTTTTAAACGATCAGA
gagtaaaagaaattttaaaagaatattgTGAATTTACAGATGAGATGGAA
GAAAAGAAACCTGCTAATACATTTAATGCATCTTCGGAAAAAAGAAAAGA
TTGCACTGATGTAGATTTTCCGAAAAAGGCAAAATTGACTGAAGAAGAAA
AGACAAATGACACTGTTCTATCCGAGAATTTTGAGAGAGGTAGAACTGTT
GCGAAAAGGCCTTGGAAATATGGCACATAGATGCCACCCACCCAACAGTT
GAGTTGCTCAGTCTGTCAGCGGTATGTATCATGGTGGATCCTCACTCTTT
CTGAGCAGGTAAGATTTATTGACCGAAAAAAAGACCGTAATCGTAGGAAT
AAAGATTACCtaaagcaaacaaagaaaaagataAATGATTGGGGTGTTTA
CTGTAAAGCAACTGTTGGATTTCTTCATATATACGAAGAGACGCTTCATT
ATTTTGgcAATAATCCGCTGATGTCGAACTTTTTAAACGATCAGAgagta
aaagaaattttaaaagaatattgTGAATTTACAGATGAGATGGAAGAAAA
GAAACCTGCTAATACATTTAATGCATCTTCGGAAAAAAGAAAAGATTGCA
CTGATGTAGATTTTCCGAAAAAGGCAAAATTGACTGAAGAAGAAAAGACA
AATGACACTGTTCTATCCGAGAATTTTGAGAGAGGTAGAACTGTTGCGAA
AAGGCCTTGGAAATATGGCACATAGATGCCACCCACCCAACAGTTGAGTT
GCTCAGTCTGTCAGCGGTATGTATCATGGTGGATCCTCACTCTTTCTGAG
CAGGTAAGATTTATTGACCGAAAAAAAGACCGTAATCGTAGGAATAAAGA
TTACCtaaagcaaacaaagaaaaagataAATGATTGGGGTGTTTACTGTA
AAGCAACTGTTGGATTTCTTCATATATACGAAGAGACGCTTCATTATTTT
GgcAATAATCCGCTGATGTCGAACTTTTTAAACGATCAGAgagtaaaaga
aattttaaaagaatattgTGAATTTACAGATGAGATGGAAGAAAAGAAAC
CTGCTAATACATTTAATGCATCTTCGGAAAAAAGAAAAGATTGCACTGAT
GTAGATTTTCCGAAAAAGGCAAAATTGACTGAAGAAGAAAAGACAAATGA
CACTGTTCTATCCGAGAATTTTGAGAGAGGTAGAACTGTTGCGAAAAGGC
CTTGGAAATATGGCACATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026199XLOC_026199Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042353-proteinTCONS_00042353-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042353-exon-sc0003361-1491911889:609..723TCONS_00042353-exon-sc0003361-1491911889:609..723Clytia hemisphaericaexon
TCONS_00042353-exon-sc0003361-1510915933:609..723TCONS_00042353-exon-sc0003361-1510915933:609..723Clytia hemisphaericaexon
TCONS_00042353-exon-sc0003361-1575043694:609..723TCONS_00042353-exon-sc0003361-1575043694:609..723Clytia hemisphaericaexon
TCONS_00042353-exon-sc0003361-1491911889:10899..10970TCONS_00042353-exon-sc0003361-1491911889:10899..10970Clytia hemisphaericaexon
TCONS_00042353-exon-sc0003361-1510915933:10899..10970TCONS_00042353-exon-sc0003361-1510915933:10899..10970Clytia hemisphaericaexon
TCONS_00042353-exon-sc0003361-1575043694:10899..10970TCONS_00042353-exon-sc0003361-1575043694:10899..10970Clytia hemisphaericaexon
TCONS_00042353-exon-sc0003361-1491911889:11217..11292TCONS_00042353-exon-sc0003361-1491911889:11217..11292Clytia hemisphaericaexon
TCONS_00042353-exon-sc0003361-1510915933:11217..11292TCONS_00042353-exon-sc0003361-1510915933:11217..11292Clytia hemisphaericaexon
TCONS_00042353-exon-sc0003361-1575043694:11217..11292TCONS_00042353-exon-sc0003361-1575043694:11217..11292Clytia hemisphaericaexon
TCONS_00042353-exon-sc0003361-1491911889:11430..11507TCONS_00042353-exon-sc0003361-1491911889:11430..11507Clytia hemisphaericaexon
TCONS_00042353-exon-sc0003361-1510915933:11430..11507TCONS_00042353-exon-sc0003361-1510915933:11430..11507Clytia hemisphaericaexon
TCONS_00042353-exon-sc0003361-1575043694:11430..11507TCONS_00042353-exon-sc0003361-1575043694:11430..11507Clytia hemisphaericaexon
TCONS_00042353-exon-sc0003361-1491911889:11657..11716TCONS_00042353-exon-sc0003361-1491911889:11657..11716Clytia hemisphaericaexon
TCONS_00042353-exon-sc0003361-1510915933:11657..11716TCONS_00042353-exon-sc0003361-1510915933:11657..11716Clytia hemisphaericaexon
TCONS_00042353-exon-sc0003361-1575043694:11657..11716TCONS_00042353-exon-sc0003361-1575043694:11657..11716Clytia hemisphaericaexon
TCONS_00042353-exon-sc0003361-1491911889:11861..12341TCONS_00042353-exon-sc0003361-1491911889:11861..12341Clytia hemisphaericaexon
TCONS_00042353-exon-sc0003361-1510915933:11861..12341TCONS_00042353-exon-sc0003361-1510915933:11861..12341Clytia hemisphaericaexon
TCONS_00042353-exon-sc0003361-1575043694:11861..12341TCONS_00042353-exon-sc0003361-1575043694:11861..12341Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003361supercontigsc0003361:609..12341 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	2.53213	2.56144	3.3929	2.81057	1.28901	0	1.19728	1.46834	1.1363	1.18524	0	0	0	0	0	0	0	0	0	0	0.266424	2.10431	0	0	0	0.205402
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042353 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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