TCONS_00042242 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042242
Unique NameTCONS_00042242
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1605

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042242 ID=TCONS_00042242|Name=TCONS_00042242|organism=Clytia hemisphaerica|type=transcript|length=1605bp
GGAAACAAAGAGGAAAGGGCAGATAACTTTCGTCGAATCAGTGGGCCAAA
CGTTCCTGTACTTGCCTTTTGCACGCCAGAATACTTGTTTGGTTCAAAAG
GAGTATTCGACAAAATCAAAAGCAATCTTCAAGACAGATTGGGAATGGTC
GTAATCGATGAAGCACACAAGGTTGTTGATCGCAGATTATCTTTTCGAGA
ATCGTACGACTCTTTGGAAAAGATTTGCCGACCATTTGGCGTCCCCAATT
TATTCTGCTCGGCATCTCTTACACCATCTTGGATTAACTTGCTGTTGGAA
AGATTCATGCCTGAAAACACTAAAGTTTTAAACCTACCAATAAAACGAGA
CCACGTCGAGCTCGAATTTGGTCAGTACAATAGATCAAAAAGCAAATccg
agaaagaaaaaggaactCATCAGAACTTTAGCTGGGAACCTGTATTAAAG
GAACTGGAAAAGCTCACAGAGGATAAAGTATCTATTGTGTTCGTTGACTA
CCAGAAAGATGCACAGACAATGGCGCTTGAACTCTCGGAAAAAGGATTGA
AAGCAAGATTTTTAGTGGGTGGTGATATGGCAGCTGATGAAAAACAGAAA
GCTTCAAATGCTTTTAAgGTTGGGGAAGATAATATCCTTGTGGCAACAGA
GACATACGAATGTGGAATGCACAACGAGAATTGCACACTCGTTGTGAGAG
TTGGCTGTCCACGAAACTTAGCTGTCCTTGTACAGGAAATTGGAAGAGTA
GGCCGGAATAGCAACGATGGTCATTTCAAGCTGTTATGGAATGAGTTTCA
TGATGATCAACGACTTGGAAATTGGGTTAAACCAGTGGGTAATAGACGGG
AAGGAATTGACAAAAGCAATGAGGAGGTGAAGAATGTGATTGACTCGTTC
GTGAACACTTGGAGATATTTATACACCCATCTTGTTGgtatgtgttcaca
tGAAGCGCTATCAATGTTCTTCGAAAATCCAGCTAACGTAAACGTGTCAC
GATTGGTTATGGAAAATTGTAATTGCTGGTCTTGTTCGAAAAATTTCCCT
ATTGTAGATATTTCCGACAAGCTTATCACAATGGTAAAAGCATTGAAGGA
GCTAACAGCTGTTGAGAGTGATGTGACCACAAGACACTTTGTTTGCTATT
TACTGATGAGCAGCATCGAGTGGCTGAGGGAGAAGATAGACGTGAAAAAT
GCAGAATATTTTGGTTGTGCAGCAAAATGGAATACAAACAAAGAAGATCT
CAACAATTTAGTTCGAATTGCCATTTGTTATGGTTTTATTCAGCTAGATT
ATGATTTCATTACTGTAACGGGTGGAGTTACAAGAACCTATCGAAGGATA
CGACCAACAATTTCAGGCGAGGAACTTTGTAATAATCCAAGACCAATCCT
TGTCCCGGACACTTCCTCAATCTTACAAAGTAATCAACGCCCCAAAGAGA
AAAAGCAAAGACAAGCAATCGGCCAACAGGGATTACCGACAGCGAAACGA
TTACTACAAAACAAAAGTGATTGGCTTACCATGGAGTCAGACGAATATAA
AACGCTTGGTTTCCGTTCCGTTGACGACCACATCCAACCCCCTTTTCTCT
ACTTT
Run BLAST on NCBI

protein sequence of TCONS_00042242-protein

>TCONS_00042242-protein ID=TCONS_00042242-protein|Name=TCONS_00042242-protein|organism=Clytia hemisphaerica|type=polypeptide|length=535bp
GNKEERADNFRRISGPNVPVLAFCTPEYLFGSKGVFDKIKSNLQDRLGMV
VIDEAHKVVDRRLSFRESYDSLEKICRPFGVPNLFCSASLTPSWINLLLE
RFMPENTKVLNLPIKRDHVELEFGQYNRSKSKSEKEKGTHQNFSWEPVLK
ELEKLTEDKVSIVFVDYQKDAQTMALELSEKGLKARFLVGGDMAADEKQK
ASNAFKVGEDNILVATETYECGMHNENCTLVVRVGCPRNLAVLVQEIGRV
GRNSNDGHFKLLWNEFHDDQRLGNWVKPVGNRREGIDKSNEEVKNVIDSF
VNTWRYLYTHLVGMCSHEALSMFFENPANVNVSRLVMENCNCWSCSKNFP
IVDISDKLITMVKALKELTAVESDVTTRHFVCYLLMSSIEWLREKIDVKN
AEYFGCAAKWNTNKEDLNNLVRIAICYGFIQLDYDFITVTGGVTRTYRRI
RPTISGEELCNNPRPILVPDTSSILQSNQRPKEKKQRQAIGQQGLPTAKR
LLQNKSDWLTMESDEYKTLGFRSVDDHIQPPFLYF
Run BLAST on NCBI

transcript from alignment at sc0003305:8295..12553+

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042242 ID=TCONS_00042242|Name=TCONS_00042242|organism=Clytia hemisphaerica|type=transcript|length=4259bp|location=Sequence derived from alignment at sc0003305:8295..12553+ (Clytia hemisphaerica)
GGAAACAAAGAGGAAAGGGCAGATAACTTTCGTCGAATCAGTGGGCCAAA CGTTCCTGTACTTGCCTTTTGCACGCCAGAATACTTGTTTGGTTCAAAAG GAGTATTCGACAAAATCAAAAGCAATCTTCAAGACAGATTGGGAATGGTC GTAATCGATGAAGCACACAAGGTTGTTGATCGCAGATTATCTTTTCGAGA ATCGTACGACTCTTTGGAAAAGATTTGCCGACCATTTGGCGTCCCCAATT TATTCTGCTCGGCATCTCTTACACCATCTTGGATTAACTTGCTGTTGGAA AGATTCATGCCTGAAAACACTAAAGTTTTAAACCTACCAATAAAACGAGA CCACGTCGAGCTCGAATTTGGTCAGTACAATAGATCAAAAAGCAAATccg agaaagaaaaaggaactCATCAGAACTTTAGCTGGGAACCTGTATTAAAG GAACTGGAAAAGCTCACAGAGGATAAAGTATCTATTGTGTTCGTTGACTA CCAGAAAGATGCACAGACAATGGCGCTTGAACTCTCGGAAAAAGGATTGA AAGCAAGATTTTTAGTGGGTGGTGATATGGCAGCTGATGAAAAACAGAAA GCTTCAAATGCTTTTAAggtaagattttattaaattcATACACTTATTAA GGCCAGGGCAAACgagtccaacatttcatccAACATGATTTTCCAATGTT GGATAAAATATTTGAAGGAAAAACTTGCGTTGGATGAAGCGAAAATCAAG GCCGGGCAAACCGATCCAACATTTCATCCGacatgacttggaaaaaaatg aaaattcaagaaataaataaaaaagtaccaccaaaccaatccaacacgaa aaattacacaattcaatgaaagaacttctttgatctcgccgcaaatgttg gatgaattgtttgatggcgatcaaacttcatccaacaccgtccaacacga tttttttcttctttttttttgaattttcatttttttccaaaattttaatt GACGCAAACCAGTCCagcatttcatccaacatcagaNtttttttccaaaa ttttaattGACGCAAACCAGTCCagcatttcatccaacatcagaaaaaag gcatgttggatgaaatgttggatcggtttgccctgGCCGACACCTCCATT TAGCGGACAAAATTTCTTGCACGGAATGGTCAAAAGCCTGTTTTTtccct ccaattagcggacaccgaGGAAAACATAGTTTCAGACATTAAGATACAAG TAATAAATGATTTTAAACCATTTATTTCAaggcattttttttcttccaaa NATAAGTGATTTTAAACCATTTATTTcaagctttttttttattttttccc ccACGTTTTGTTTACATGtaacaaatattttgagattaaGAACATTGGCG TTTTTTCATTCCTTTTcttaatattgaaatttttagaGGATTCTAGGAAA TTTCTGGGGGCAACGTTCCAGCTGGCATTTTTCCTTTGTCACCGTTTTTG TAGCCCGGGGtcacttatagctttttgatagactagatggcgctgataag tggtcCTGTGTAATTTGGCAGGCTCCACTTTTGGCTTAtcttgaggtggt agcaaatccgtaccactagatccagtctctttttgaagaaaaacaaacag aaaaccatAACCAGTagaccaacttttttttaatttttgaggtatttttt tgtttttattatagtttcataaactttgatggaattttagaaaacatttt attgttttgatgttttcttataatttttgaaaacgaaagtgaaaaaattc aagatgtagactggagtcgtttataatgcatgtaatactaataataaaca caaataatgatacgggatttagtttgtataaacgactggaagaaNGTGAA TTCCTTCACGACATCACGAAAAGAATTTGGcgaattcacgcattcacgca atgtaAAAGTAGATTTTCACGTTCATGCAAAGATTTAAATCCACGTATTC ACGCTtctttttatcgattttcacGCGTTAACACAAGTAAAAAAGCCCAT TCATGAATTCACGAAAACCATCTTCCAGGGTCTATTTTTTACACCCCCAA CGGCCACCAAGGGAGgtttaaaataattcttttttaatcaatCTAAAGAG AAACTTTCATTTTCGTACAAGGTTGGGGAAGATAATATCCTTGTGGCAAC AGAGACATACGAATGTGGAATGCACAACGAGAATTGCACACTCGTTGTGA GAGTTGGCTGTCCACGAAACTTAGCTGTCCTTGTACAGGAAATTGGAAGA GTAGGCCGGAATAGCAACGATGGTCATTTCAAGCTGTTATGGAATGAGTT TCATGATGATCAACGACTTGGAAATTGGGTTAAACCAGTGGGTAATAGAC GGGAAGGAATTGACAAAAGCAATGAGGAGGTGAAGAATGTGATTGACTCG TTCGTGAACACTTGGAGATATTTATACACCCATCTTGTTGGTAAGAACTA GTTCATTCCTTTAGAGCTTAAAAGTGTACTTGATCTTGAAAATACTGTTC CAATANGAGATATTTATACACCCATCTTGTTGGTAAGAACTAGTTCATTC CTTTAGAGCTTAAAAGTGTACTTGATCTTGAAAATACTGTTCCAATATCA GGTCAACCGAAGAGAGCCAATGGACATGCATCTTCATCTTGTTTTTGGTG GAAAGCATTAAGGCACAANAACTAGTTCATTCCTTTAGAGCTTAAAAGTG TACTTGATCTTGAAAATACTGTTCCAATATCAGGTCAACCGAAGAGAGCC AATGGACATGCATCTTCATCTTGTTTTTGGTGGAAAGCATTAAGGCACAA ACTCTTATTTGCCGCAAATCCCTGCGGATTTCCTGGGTTTTCTTTTTGCT AAGATGTATTATTTTCACCGCCCTCACCTGCGAGTTTTCACAAGTTGCTG TCTGTTTCCTGcggattttcttattaaaaatgaATTTATGTTCCTGCCTC CAAGTAAACCCTCAAAACCCGCAGGTGGAGGAGGGAAATATTTGATATCA AAGTTCTACTAAAGCCTCCGTCTGCAGGAGGCATAGAACACACATAGAAC TCGCAAAAACCTCAGACAGAGTTTTatgattgaaataaaattaaagGAGT ATGAGTGAGATAATAGATATAAAACATGAAGAAACCCAATGGAAActgca ggaaaaaagtgaaaatctgtGGTTTATTTGATGTGCGTGCGAAGCGTACC AGTCGAAGGGTGTGGGTCCTATCTTGTTTTGAGTGTGACACTAATCAGTG AAAGGGCCTGGTTTTTATTGTGTTTTGGGTGTGACATTTTAGGAGCCAAG TGTATTTCACTGTTACCCTCTCTATTTTCCTTTCAAACTCACCTCTTATA ATTCCAATCCTCTTTTTATTCCTTCGTTTAAACCTCCTATCACCCCCTGA GAGGCCTTTCTTGAAACAAAATACATAAgtgttaataattttttttaagg tatgtgttcacatGAAGCGCTATCAATGTTCTTCGAAAATCCAGCTAACG TAAACGTGTCACGATTGGTTATGGAAAATTNTTtttttaaggtatgtgtt cacatGAAGCGCTATCAATGTTCTTCGAAAATCCAGCTAACGTAAACGTG TCACGATTGGTTATGGAAAATTGTAATTGCTGGTCTTGTTCGAAAAATTT CCCTATTGTAGATATTTCCGACAAGCTTATCACAATGGTAAAAGCATTGA AGGAGCTAACAGCTGTTGAGAGTGATGTGACCACAAGACACTTTGTTTGC TATTTACTGATGAGCAGCATCGAGTGGCTGAGGGAGAAGATAGACGTGAA AAATGCAGAATATTTTGGTTGTGCAGCAAAATGGAATACAAACAAAGAAG ATCTCAACAATTTAGTTCGAATTGCCATTTGTTATGGTTTTATTCAGCTA GATTATGATTTCATTACTGTAACGGGTGGAGTTACAAGAACCTATCGAAG GATACGACCAACAATTTCAGGCGAGGAACTTTGTAATAATCCAAGACCAA TCCTTGTCCCGGACACTTCCTCAATCTTACAAAGTAATCAACGCCCCAAA GAGAAAAAGCAAAGACAAGCAATCGGCCAACAGGGATTACCGACAGCGAA ACGATTACTACAAAACAAAAGTGATTGGCTTACCATGGAGTCAGACGAAT ATAAAACGCTTGGTTTCCGTTCCGTTGACGACCACATCCAACCCCCTTTT CTCTACTTT

Coding sequence (CDS) from alignment at sc0003305:8295..12553+

>TCONS_00042242 ID=TCONS_00042242|Name=TCONS_00042242|organism=Clytia hemisphaerica|type=CDS|length=4815bp|location=Sequence derived from alignment at sc0003305:8295..12553+ (Clytia hemisphaerica)
GGAAACAAAGAGGAAAGGGCAGATAACTTTCGTCGAATCAGTGGGCCAAA
CGTTCCTGTACTTGCCTTTTGCACGCCAGAATACTTGTTTGGTTCAAAAG
GAGTATTCGACAAAATCAAAAGCAATCTTCAAGACAGATTGGGAATGGTC
GTAATCGATGAAGCACACAAGGTTGTTGATCGCAGATTATCTTTTCGAGA
ATCGTACGACTCTTTGGAAAAGATTTGCCGACCATTTGGCGTCCCCAATT
TATTCTGCTCGGCATCTCTTACACCATCTTGGATTAACTTGCTGTTGGAA
AGATTCATGCCTGAAAACACTAAAGTTTTAAACCTACCAATAAAACGAGA
CCACGTCGAGCTCGAATTTGGTCAGTACAATAGATCAAAAAGCAAATccg
agaaagaaaaaggaactCATCAGAACTTTAGCTGGGAACCTGTATTAAAG
GAACTGGAAAAGCTCACAGAGGATAAAGTATCTATTGTGTTCGTTGACTA
CCAGAAAGATGCACAGACAATGGCGCTTGAACTCTCGGAAAAAGGATTGA
AAGCAAGATTTTTAGTGGGTGGTGATATGGCAGCTGATGAAAAACAGAAA
GCTTCAAATGCTTTTAAgGTTGGGGAAGATAATATCCTTGTGGCAACAGA
GACATACGAATGTGGAATGCACAACGAGAATTGCACACTCGTTGTGAGAG
TTGGCTGTCCACGAAACTTAGCTGTCCTTGTACAGGAAATTGGAAGAGTA
GGCCGGAATAGCAACGATGGTCATTTCAAGCTGTTATGGAATGAGTTTCA
TGATGATCAACGACTTGGAAATTGGGTTAAACCAGTGGGTAATAGACGGG
AAGGAATTGACAAAAGCAATGAGGAGGTGAAGAATGTGATTGACTCGTTC
GTGAACACTTGGAGATATTTATACACCCATCTTGTTGgtatgtgttcaca
tGAAGCGCTATCAATGTTCTTCGAAAATCCAGCTAACGTAAACGTGTCAC
GATTGGTTATGGAAAATTGTAATTGCTGGTCTTGTTCGAAAAATTTCCCT
ATTGTAGATATTTCCGACAAGCTTATCACAATGGTAAAAGCATTGAAGGA
GCTAACAGCTGTTGAGAGTGATGTGACCACAAGACACTTTGTTTGCTATT
TACTGATGAGCAGCATCGAGTGGCTGAGGGAGAAGATAGACGTGAAAAAT
GCAGAATATTTTGGTTGTGCAGCAAAATGGAATACAAACAAAGAAGATCT
CAACAATTTAGTTCGAATTGCCATTTGTTATGGTTTTATTCAGCTAGATT
ATGATTTCATTACTGTAACGGGTGGAGTTACAAGAACCTATCGAAGGATA
CGACCAACAATTTCAGGCGAGGAACTTTGTAATAATCCAAGACCAATCCT
TGTCCCGGACACTTCCTCAATCTTACAAAGTAATCAACGCCCCAAAGAGA
AAAAGCAAAGACAAGCAATCGGCCAACAGGGATTACCGACAGCGAAACGA
TTACTACAAAACAAAAGTGATTGGCTTACCATGGAGTCAGACGAATATAA
AACGCTTGGTTTCCGTTCCGTTGACGACCACATCCAACCCCCTTTTCTCT
ACTTTGGAAACAAAGAGGAAAGGGCAGATAACTTTCGTCGAATCAGTGGG
CCAAACGTTCCTGTACTTGCCTTTTGCACGCCAGAATACTTGTTTGGTTC
AAAAGGAGTATTCGACAAAATCAAAAGCAATCTTCAAGACAGATTGGGAA
TGGTCGTAATCGATGAAGCACACAAGGTTGTTGATCGCAGATTATCTTTT
CGAGAATCGTACGACTCTTTGGAAAAGATTTGCCGACCATTTGGCGTCCC
CAATTTATTCTGCTCGGCATCTCTTACACCATCTTGGATTAACTTGCTGT
TGGAAAGATTCATGCCTGAAAACACTAAAGTTTTAAACCTACCAATAAAA
CGAGACCACGTCGAGCTCGAATTTGGTCAGTACAATAGATCAAAAAGCAA
ATccgagaaagaaaaaggaactCATCAGAACTTTAGCTGGGAACCTGTAT
TAAAGGAACTGGAAAAGCTCACAGAGGATAAAGTATCTATTGTGTTCGTT
GACTACCAGAAAGATGCACAGACAATGGCGCTTGAACTCTCGGAAAAAGG
ATTGAAAGCAAGATTTTTAGTGGGTGGTGATATGGCAGCTGATGAAAAAC
AGAAAGCTTCAAATGCTTTTAAgGTTGGGGAAGATAATATCCTTGTGGCA
ACAGAGACATACGAATGTGGAATGCACAACGAGAATTGCACACTCGTTGT
GAGAGTTGGCTGTCCACGAAACTTAGCTGTCCTTGTACAGGAAATTGGAA
GAGTAGGCCGGAATAGCAACGATGGTCATTTCAAGCTGTTATGGAATGAG
TTTCATGATGATCAACGACTTGGAAATTGGGTTAAACCAGTGGGTAATAG
ACGGGAAGGAATTGACAAAAGCAATGAGGAGGTGAAGAATGTGATTGACT
CGTTCGTGAACACTTGGAGATATTTATACACCCATCTTGTTGgtatgtgt
tcacatGAAGCGCTATCAATGTTCTTCGAAAATCCAGCTAACGTAAACGT
GTCACGATTGGTTATGGAAAATTGTAATTGCTGGTCTTGTTCGAAAAATT
TCCCTATTGTAGATATTTCCGACAAGCTTATCACAATGGTAAAAGCATTG
AAGGAGCTAACAGCTGTTGAGAGTGATGTGACCACAAGACACTTTGTTTG
CTATTTACTGATGAGCAGCATCGAGTGGCTGAGGGAGAAGATAGACGTGA
AAAATGCAGAATATTTTGGTTGTGCAGCAAAATGGAATACAAACAAAGAA
GATCTCAACAATTTAGTTCGAATTGCCATTTGTTATGGTTTTATTCAGCT
AGATTATGATTTCATTACTGTAACGGGTGGAGTTACAAGAACCTATCGAA
GGATACGACCAACAATTTCAGGCGAGGAACTTTGTAATAATCCAAGACCA
ATCCTTGTCCCGGACACTTCCTCAATCTTACAAAGTAATCAACGCCCCAA
AGAGAAAAAGCAAAGACAAGCAATCGGCCAACAGGGATTACCGACAGCGA
AACGATTACTACAAAACAAAAGTGATTGGCTTACCATGGAGTCAGACGAA
TATAAAACGCTTGGTTTCCGTTCCGTTGACGACCACATCCAACCCCCTTT
TCTCTACTTTGGAAACAAAGAGGAAAGGGCAGATAACTTTCGTCGAATCA
GTGGGCCAAACGTTCCTGTACTTGCCTTTTGCACGCCAGAATACTTGTTT
GGTTCAAAAGGAGTATTCGACAAAATCAAAAGCAATCTTCAAGACAGATT
GGGAATGGTCGTAATCGATGAAGCACACAAGGTTGTTGATCGCAGATTAT
CTTTTCGAGAATCGTACGACTCTTTGGAAAAGATTTGCCGACCATTTGGC
GTCCCCAATTTATTCTGCTCGGCATCTCTTACACCATCTTGGATTAACTT
GCTGTTGGAAAGATTCATGCCTGAAAACACTAAAGTTTTAAACCTACCAA
TAAAACGAGACCACGTCGAGCTCGAATTTGGTCAGTACAATAGATCAAAA
AGCAAATccgagaaagaaaaaggaactCATCAGAACTTTAGCTGGGAACC
TGTATTAAAGGAACTGGAAAAGCTCACAGAGGATAAAGTATCTATTGTGT
TCGTTGACTACCAGAAAGATGCACAGACAATGGCGCTTGAACTCTCGGAA
AAAGGATTGAAAGCAAGATTTTTAGTGGGTGGTGATATGGCAGCTGATGA
AAAACAGAAAGCTTCAAATGCTTTTAAgGTTGGGGAAGATAATATCCTTG
TGGCAACAGAGACATACGAATGTGGAATGCACAACGAGAATTGCACACTC
GTTGTGAGAGTTGGCTGTCCACGAAACTTAGCTGTCCTTGTACAGGAAAT
TGGAAGAGTAGGCCGGAATAGCAACGATGGTCATTTCAAGCTGTTATGGA
ATGAGTTTCATGATGATCAACGACTTGGAAATTGGGTTAAACCAGTGGGT
AATAGACGGGAAGGAATTGACAAAAGCAATGAGGAGGTGAAGAATGTGAT
TGACTCGTTCGTGAACACTTGGAGATATTTATACACCCATCTTGTTGgta
tgtgttcacatGAAGCGCTATCAATGTTCTTCGAAAATCCAGCTAACGTA
AACGTGTCACGATTGGTTATGGAAAATTGTAATTGCTGGTCTTGTTCGAA
AAATTTCCCTATTGTAGATATTTCCGACAAGCTTATCACAATGGTAAAAG
CATTGAAGGAGCTAACAGCTGTTGAGAGTGATGTGACCACAAGACACTTT
GTTTGCTATTTACTGATGAGCAGCATCGAGTGGCTGAGGGAGAAGATAGA
CGTGAAAAATGCAGAATATTTTGGTTGTGCAGCAAAATGGAATACAAACA
AAGAAGATCTCAACAATTTAGTTCGAATTGCCATTTGTTATGGTTTTATT
CAGCTAGATTATGATTTCATTACTGTAACGGGTGGAGTTACAAGAACCTA
TCGAAGGATACGACCAACAATTTCAGGCGAGGAACTTTGTAATAATCCAA
GACCAATCCTTGTCCCGGACACTTCCTCAATCTTACAAAGTAATCAACGC
CCCAAAGAGAAAAAGCAAAGACAAGCAATCGGCCAACAGGGATTACCGAC
AGCGAAACGATTACTACAAAACAAAAGTGATTGGCTTACCATGGAGTCAG
ACGAATATAAAACGCTTGGTTTCCGTTCCGTTGACGACCACATCCAACCC
CCTTTTCTCTACTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026102XLOC_026102Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042242-proteinTCONS_00042242-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042242-exon-sc0003305-1491911889:8295..8912TCONS_00042242-exon-sc0003305-1491911889:8295..8912Clytia hemisphaericaexon
TCONS_00042242-exon-sc0003305-1510915933:8295..8912TCONS_00042242-exon-sc0003305-1510915933:8295..8912Clytia hemisphaericaexon
TCONS_00042242-exon-sc0003305-1575043694:8295..8912TCONS_00042242-exon-sc0003305-1575043694:8295..8912Clytia hemisphaericaexon
TCONS_00042242-exon-sc0003305-1491911889:10466..10784TCONS_00042242-exon-sc0003305-1491911889:10466..10784Clytia hemisphaericaexon
TCONS_00042242-exon-sc0003305-1510915933:10466..10784TCONS_00042242-exon-sc0003305-1510915933:10466..10784Clytia hemisphaericaexon
TCONS_00042242-exon-sc0003305-1575043694:10466..10784TCONS_00042242-exon-sc0003305-1575043694:10466..10784Clytia hemisphaericaexon
TCONS_00042242-exon-sc0003305-1491911889:11886..12553TCONS_00042242-exon-sc0003305-1491911889:11886..12553Clytia hemisphaericaexon
TCONS_00042242-exon-sc0003305-1510915933:11886..12553TCONS_00042242-exon-sc0003305-1510915933:11886..12553Clytia hemisphaericaexon
TCONS_00042242-exon-sc0003305-1575043694:11886..12553TCONS_00042242-exon-sc0003305-1575043694:11886..12553Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003305supercontigsc0003305:8295..12553 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0 0 0.0214158 0.0265269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.272857 0.608797 0 0 0 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR011991WHTH_DNA-bd_dom
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042242 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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