TCONS_00042242-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00042242-protein
Unique NameTCONS_00042242-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length535

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00042242-protein ID=TCONS_00042242-protein|Name=TCONS_00042242-protein|organism=Clytia hemisphaerica|type=polypeptide|length=535bp
GNKEERADNFRRISGPNVPVLAFCTPEYLFGSKGVFDKIKSNLQDRLGMV
VIDEAHKVVDRRLSFRESYDSLEKICRPFGVPNLFCSASLTPSWINLLLE
RFMPENTKVLNLPIKRDHVELEFGQYNRSKSKSEKEKGTHQNFSWEPVLK
ELEKLTEDKVSIVFVDYQKDAQTMALELSEKGLKARFLVGGDMAADEKQK
ASNAFKVGEDNILVATETYECGMHNENCTLVVRVGCPRNLAVLVQEIGRV
GRNSNDGHFKLLWNEFHDDQRLGNWVKPVGNRREGIDKSNEEVKNVIDSF
VNTWRYLYTHLVGMCSHEALSMFFENPANVNVSRLVMENCNCWSCSKNFP
IVDISDKLITMVKALKELTAVESDVTTRHFVCYLLMSSIEWLREKIDVKN
AEYFGCAAKWNTNKEDLNNLVRIAICYGFIQLDYDFITVTGGVTRTYRRI
RPTISGEELCNNPRPILVPDTSSILQSNQRPKEKKQRQAIGQQGLPTAKR
LLQNKSDWLTMESDEYKTLGFRSVDDHIQPPFLYF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_026102XLOC_026102Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00042242TCONS_00042242Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR011991WHTH_DNA-bd_dom
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 172..254
e-value: 3.1E-11
score: 53.3
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 148..253
e-value: 2.5E-14
score: 53.5
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 147..297
score: 15.568
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 341..490
e-value: 7.3E-4
score: 18.7
NoneNo IPR availableGENE3D3.40.50.300coord: 141..300
e-value: 7.8E-22
score: 76.9
NoneNo IPR availableGENE3D3.40.50.300coord: 2..140
e-value: 2.6E-8
score: 32.7
NoneNo IPR availableCDDcd00079HELICccoord: 146..258
e-value: 6.1628E-15
score: 70.7296
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..108
score: 7.598
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 145..265
coord: 20..106

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042242-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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