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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042228 ID=TCONS_00042228|Name=TCONS_00042228|organism=Clytia hemisphaerica|type=transcript|length=1307bp
GTTATTGCTTACTTTTAAAGCGTGTCTCCCGAACCACCATTTTAAGGATG
ACTAAACTTCAAATACTTTTTAGCTATTAAACAACCTACAGTGATTTCCC
ATTCTCTCTTTTTTCACAGTTCAAACAACGCTTTTGAGGATGCTGACAAA
TCATACAATCATCTGGATAACGAACAATTAGTGAAACTTCTCCGAGAAAT
GGATTCTTCTAATGAACAATACAAAACTGTTGAAAACCAGACTCCTCCAT
GTGTCAGCACATCTCAGATTCAACGTAGTGGATCCCAGGAAGCGGGAGGA
GATAAGGCGATTCAACCTTCAGGAGATAACGTGGCTCAGAATTTGGGAGT
TACCGCAACTCTGGATTCAGGAGATAAGGAAACATTAACTATATTATCTA
CTGATAGAAATGAAGTCTTACCTTGTGGAGATAACAAAATCGTAGAATCA
GAAGATTCCTTGCAAACTATCGAGTCTGAAAAGGGTCAAAGTGGACGCAT
AGAGACTTTAAGTGAAATTGGAACTAAGAAGAATTCTGACCAAACACGTA
TTCAAGATATTGAAATGGACGAATCAAATCACAGTACCGATACGAACAGC
CAATCAGATCGTAGTACCGTTGGTCTCAGCCAATCAGTGTGTACTGCGGA
TTTGAACGACCAATCAGAAGCGGATACGGAAACGGCCGACGAACAAGGCG
ACGAGTCATCGGCAACACTCGTTAGTAATACCGAcgaattaaaaatcaaa
accgAGAACGAAGACTCGCATCAGActcttgaaaatgaaatgaaaactga
aaataataataGCGACAATGAATATAGACCTTTGGCTACGTTCGGTAAAT
TACCACCACTCTCATTCGAGGGATTGGATCAAGCGGCGATCGTAGGCCGT
TTCAAACTTTTACTTGAAGTGGAGAAAATAGAACATGAGATAGAAGAACA
AGTACAACAGTTGAACCAACATCTAGACGGTAAGTGATTTGCCAGCTGTT
TATTTGCATTCTCAAGTGTCCATCAGTAACCCATCAACCTAgcttgtttt
caattttttatattaaggccggcgcaaatgaatccaacattcaatccaac
atttccaaTTCATTGATAGACAAAATGTTGGACGAAAAGTcacgtggaaa
aattcgaaaatttgcatgaaaagtcatttgtgcaaaaacgtcaaacattt
tcatccgacatgattacgcaaatgcatccaacattgaaaccaacataaaa
gtgacgtcaatctcataaaaaatgttggatgaaaagtttgatagcgatca
aacttca Run BLAST on NCBI transcript from alignment at sc0003295:5413..6719- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042228 ID=TCONS_00042228|Name=TCONS_00042228|organism=Clytia hemisphaerica|type=transcript|length=1307bp|location=Sequence derived from alignment at sc0003295:5413..6719- (Clytia hemisphaerica)
GTTATTGCTTACTTTTAAAGCGTGTCTCCCGAACCACCATTTTAAGGATG
ACTAAACTTCAAATACTTTTTAGCTATTAAACAACCTACAGTGATTTCCC
ATTCTCTCTTTTTTCACAGTTCAAACAACGCTTTTGAGGATGCTGACAAA
TCATACAATCATCTGGATAACGAACAATTAGTGAAACTTCTCCGAGAAAT
GGATTCTTCTAATGAACAATACAAAACTGTTGAAAACCAGACTCCTCCAT
GTGTCAGCACATCTCAGATTCAACGTAGTGGATCCCAGGAAGCGGGAGGA
GATAAGGCGATTCAACCTTCAGGAGATAACGTGGCTCAGAATTTGGGAGT
TACCGCAACTCTGGATTCAGGAGATAAGGAAACATTAACTATATTATCTA
CTGATAGAAATGAAGTCTTACCTTGTGGAGATAACAAAATCGTAGAATCA
GAAGATTCCTTGCAAACTATCGAGTCTGAAAAGGGTCAAAGTGGACGCAT
AGAGACTTTAAGTGAAATTGGAACTAAGAAGAATTCTGACCAAACACGTA
TTCAAGATATTGAAATGGACGAATCAAATCACAGTACCGATACGAACAGC
CAATCAGATCGTAGTACCGTTGGTCTCAGCCAATCAGTGTGTACTGCGGA
TTTGAACGACCAATCAGAAGCGGATACGGAAACGGCCGACGAACAAGGCG
ACGAGTCATCGGCAACACTCGTTAGTAATACCGACGAATTAAAAATCAAA
ACCGAGAACGAAGACTCGCATCAGACTCTTGAAAATGAAATGAAAACTGA
AAATAATAATAGCGACAATGAATATAGACCTTTGGCTACGTTCGGTAAAT
TACCACCACTCTCATTCGAGGGATTGGATCAAGCGGCGATCGTAGGCCGT
TTCAAACTTTTACTTGAAGTGGAGAAAATAGAACATGAGATAGAAGAACA
AGTACAACAGTTGAACCAACATCTAGACGGTAAGTGATTTGCCAGCTGTT
TATTTGCATTCTCAAGTGTCCATCAGTAACCCATCAACCTAGCTTGTTTT
CAATTTTTTATATTAAGGCCGGCGCAAATGAATCCAACATTCAATCCAAC
ATTTCCAATTCATTGATAGACAAAATGTTGGACGAAAAGTCACGTGGAAA
AATTCGAAAATTTGCATGAAAAGTCATTTGTGCAAAAACGTCAAACATTT
TCATCCGACATGATTACGCAAATGCATCCAACATTGAAACCAACATAAAA
GTGACGTCAATCTCATAAAAAATGTTGGATGAAAAGTTTGATAGCGATCA
AACTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042228-exon-sc0003295-1575043694:5413..6719 | TCONS_00042228-exon-sc0003295-1575043694:5413..6719 | Clytia hemisphaerica | exon |
| TCONS_00042228-exon-sc0003295-1510915933:5413..6719 | TCONS_00042228-exon-sc0003295-1510915933:5413..6719 | Clytia hemisphaerica | exon |
| TCONS_00042228-exon-sc0003295-1491911889:5413..6719 | TCONS_00042228-exon-sc0003295-1491911889:5413..6719 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003295 | supercontig | sc0003295:5413..6719 - |
Blast
The following BLAST results are available for this feature:
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