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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042129 ID=TCONS_00042129|Name=TCONS_00042129|organism=Clytia hemisphaerica|type=transcript|length=1007bp
tttgttttattttcggatgattctctattttgatctctctctttaattcg
atttgTCCTCTACATCTaccactctctctaattcgaatgatacTCTATTT
CGACcactctccctaattcgaatgTTTCTCTATATTGATTGGAAACAGgt
tttgagaaattcaagaaaaaaaacagaaatgggTATTATTTTAAGCTGGA
AagctcttttaaaaaaatttctttattgaATGAAAACTCATCAAACAACA
CAGGTTtcttaaatcaaagaaaacaatttcacaaaaattgataaattatc
cAAGAATCAACAAAAATGTATTTCGTATAAGTCACGTAAACATAGCAAAG
TTTACGGTGATCTtgcaaaaacatcaaatttgggtgaaaaacTGCTACAA
AAGTGTAACAAAATGTTCATTGATAATCTAGGATATTTTAAAAATTCGTC
GTTCTTTTTTAATGTTACGAAGTAGGCACTTATCCCCCTCTCTAGCCGAC
AATCGTTTATTCTGAGCCTAAGGACCAAGATCTTGaaaattggtcttttt
tgaCCACATTTCACCAAAAAGtcttgaaatcaattttttcataaaaaggc
ATTTGGATTGGTCAAATccgtcaaaagaaaaatttcgaaaatggccgaaa
aattgtgtttttgccAAATTCTGTCAATCTTGCTTAAAGTTAATCATTTC
GAGGTTTAATTAATTTTGTTGCTTTTCGTATGACAAAAGAACGGCCAGGA
AAAGAGTTGCAGTGGCTTCTTCACTGTCGAGTTTAAACTGTGACGCTAAA
CTGTTTTTAAAAGCTAGGACTTGGAAActcgtcaaaaaaagattttacaa
gTCAAAATCGCGAGTAAAAGCCCATTTTTTACtcaaaatacaaacaaaaa
ttgAGTTCTAAAGCTTGATAACGATATGACGACGATAAGGTGTTCGATTT
AGAACAGGATAGCCATAGCTTCAAAGTGTCAAGTACGGACAACCTCtcag
ccaaatt Run BLAST on NCBI transcript from alignment at sc0003220:9399..10405 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042129 ID=TCONS_00042129|Name=TCONS_00042129|organism=Clytia hemisphaerica|type=transcript|length=1007bp|location=Sequence derived from alignment at sc0003220:9399..10405 (Clytia hemisphaerica)
aatttggctgaGAGGTTGTCCGTACTTGACACTTTGAAGCTATGGCTATC
CTGTTCTAAATCGAACACCTTATCGTCGTCATATCGTTATCAAGCTTTAG
AACTcaatttttgtttgtattttgaGTAAAAAATGGGCTTTTACTCGCGA
TTTTGActtgtaaaatctttttttgacgagTTTCCAAGTCCTAGCTTTTA
AAAACAGTTTAGCGTCACAGTTTAAACTCGACAGTGAAGAAGCCACTGCA
ACTCTTTTCCTGGCCGTTCTTTTGTCATACGAAAAGCAACAAAATTAATT
AAACCTCGAAATGATTAACTTTAAGCAAGATTGACAGAATTTggcaaaaa
cacaatttttcggccattttcgaaatttttcttttgacggATTTGACCAA
TCCAAATgcctttttatgaaaaaattgatttcaagaCTTTTTGGTGAAAT
GTGGtcaaaaaagaccaattttCAAGATCTTGGTCCTTAGGCTCAGAATA
AACGATTGTCGGCTAGAGAGGGGGATAAGTGCCTACTTCGTAACATTAAA
AAAGAACGACGAATTTTTAAAATATCCTAGATTATCAATGAACATTTTGT
TACACTTTTGTAGCAgtttttcacccaaatttgatgtttttgcaAGATCA
CCGTAAACTTTGCTATGTTTACGTGACTTATACGAAATACATTTTTGTTG
ATTCTTggataatttatcaatttttgtgaaattgttttctttgatttaag
aAACCTGTGTTGTTTGATGAGTTTTCATtcaataaagaaatttttttaaa
agagctTTCCAGCTTAAAATAATAcccatttctgttttttttcttgaatt
tctcaaaacCTGTTTCCAATCAATATAGAGAAAcattcgaattagggaga
gtgGTCGAAATAGAgtatcattcgaattagagagagtggtAGATGTAGAG
GAcaaatcgaattaaagagagagatcaaaatagagaatcatccgaaaata
aaacaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042129-exon-sc0003220-1491911889:9399..10405 | TCONS_00042129-exon-sc0003220-1491911889:9399..10405 | Clytia hemisphaerica | exon |
| TCONS_00042129-exon-sc0003220-1510915933:9399..10405 | TCONS_00042129-exon-sc0003220-1510915933:9399..10405 | Clytia hemisphaerica | exon |
| TCONS_00042129-exon-sc0003220-1575043694:9399..10405 | TCONS_00042129-exon-sc0003220-1575043694:9399..10405 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003220 | supercontig | sc0003220:9399..10405 . |
Blast
The following BLAST results are available for this feature:
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