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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041975 ID=TCONS_00041975|Name=TCONS_00041975|organism=Clytia hemisphaerica|type=transcript|length=935bp
AAACTTTGTTAGAATGTTCAAACTCTTTGAATGACGATCTGTTTTATGGG
GTAATGGATCAGAAAGAAACCAAATACCGTTTAAGACCTTGATATTCAAA
ATATAAGAATCAGGCAGACAGATCCCAGAAAAAAGCGTGAACTAGAAAAT
GATGAAAACGTACCGCAAGACGAGTACAGTCCCAGTCCAGTACATCAGGA
CATAACATAAGCACGAAGcagtaaaaaattgaaaatagacCAGACTATCG
CCACACCCAAAGTCGATAAAGATTCGAAACCCTGCATTATTTGTAATCAA
CTTAAAACTAAGGATTGTCAGCGTACAAGGTGCATAATTTGTGAAGCAGA
CACATTCCTTTCTCTCCGCCATTAAATATTATAAAGATGAAGTGTACACC
GATGCAGTCTCCTGGAAAGTACAAAGGTTGTTTTTGCAAATGATATTATA
TTCTATAAAAACTGTATGGGAAATTATTTGAGAAAAGTTGAGCGCAAAAT
CGAAAAACTGCTGAACCCACCTTGAACCGATTCCAAGAAACAAAGCTTGT
GCGGATTATTCAAGGAGTTTGTGGTTAAAATCGATATTCAGAACAAAGCT
TGTGCGTTAGCAACCTGCAGAGACCAGTTCCAGAAATATTTAGAGACTAA
GAAACATGCTCAAggtaatattttatgttttctgCAACTAATTTTTCCTT
ATGAATTTTGTACTTCACATGAACACCCATTTTTGGCGACCTTCTCTCAT
TTTCAtatcgcaaaaattaattctaCGAAAATcagatcttttaaaaaaag
ataacgCCACTGTTTCATCAtgaatttattatagagactctggataaaca
tcgaatggaACGGTTGAGAGCGGAGTATTGTCttctattgtttcaaaaaa
caatcgatgaacaggctttgtccgcaaaggacaac Run BLAST on NCBI transcript from alignment at sc0003129:589..1523 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041975 ID=TCONS_00041975|Name=TCONS_00041975|organism=Clytia hemisphaerica|type=transcript|length=935bp|location=Sequence derived from alignment at sc0003129:589..1523 (Clytia hemisphaerica)
gttgtcctttgcggacaaagcctgttcatcgattgttttttgaaacaata
gaaGACAATACTCCGCTCTCAACCGTtccattcgatgtttatccagagtc
tctataataaattcaTGATGAAACAGTGGcgttatctttttttaaaagat
ctgATTTTCGtagaattaatttttgcgataTGAAAATGAGAGAAGGTCGC
CAAAAATGGGTGTTCATGTGAAGTACAAAATTCATAAGGAAAAATTAGTT
GcagaaaacataaaatattaccTTGAGCATGTTTCTTAGTCTCTAAATAT
TTCTGGAACTGGTCTCTGCAGGTTGCTAACGCACAAGCTTTGTTCTGAAT
ATCGATTTTAACCACAAACTCCTTGAATAATCCGCACAAGCTTTGTTTCT
TGGAATCGGTTCAAGGTGGGTTCAGCAGTTTTTCGATTTTGCGCTCAACT
TTTCTCAAATAATTTCCCATACAGTTTTTATAGAATATAATATCATTTGC
AAAAACAACCTTTGTACTTTCCAGGAGACTGCATCGGTGTACACTTCATC
TTTATAATATTTAATGGCGGAGAGAAAGGAATGTGTCTGCTTCACAAATT
ATGCACCTTGTACGCTGACAATCCTTAGTTTTAAGTTGATTACAAATAAT
GCAGGGTTTCGAATCTTTATCGACTTTGGGTGTGGCGATAGTCTGgtcta
ttttcaattttttactgCTTCGTGCTTATGTTATGTCCTGATGTACTGGA
CTGGGACTGTACTCGTCTTGCGGTACGTTTTCATCATTTTCTAGTTCACG
CTTTTTTCTGGGATCTGTCTGCCTGATTCTTATATTTTGAATATCAAGGT
CTTAAACGGTATTTGGTTTCTTTCTGATCCATTACCCCATAAAACAGATC
GTCATTCAAAGAGTTTGAACATTCTAACAAAGTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041975-exon-sc0003129-1491911889:589..1523 | TCONS_00041975-exon-sc0003129-1491911889:589..1523 | Clytia hemisphaerica | exon |
| TCONS_00041975-exon-sc0003129-1510915933:589..1523 | TCONS_00041975-exon-sc0003129-1510915933:589..1523 | Clytia hemisphaerica | exon |
| TCONS_00041975-exon-sc0003129-1575043694:589..1523 | TCONS_00041975-exon-sc0003129-1575043694:589..1523 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003129 | supercontig | sc0003129:589..1523 . |
Blast
The following BLAST results are available for this feature:
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