TCONS_00041971 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041971
Unique NameTCONS_00041971
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1679

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041971 ID=TCONS_00041971|Name=TCONS_00041971|organism=Clytia hemisphaerica|type=transcript|length=1679bp
GTTTTCACCAAAAAGTGACATTGCTCAAAAACAAATTAGCTGTATGATTT
GTAGGCTGCTTGTAATTACCAACACTTTTTCATTGCAGCCCAAGACGATC
CATACATAGGTTTTGACGACGCAGAACACCCGTACGCAGCAAACATAGTG
GTGACTGACACTTCCTTCGCACCTCCTCAAAAGAAAGATTCATCACCAAG
CTTCCACCACGTCACCACGCCACCACCTCAAATATCAACCGTACAACCAA
CTGTCATTCGAAAACGAGGTGGTAGTCTACAATGTACAATTTGCAGAAAG
ACCTTCAAAACACATTCCAACTTGGTGACCCACATGAGATTCCACAGTGG
AGAGAAACCGTTTGCATGTCATCTTTGCAACAAACCTTTTACCACCAAGA
GTGACCTCAAAAGACACATGAAAATACATTCCATTGACAACAAGTCTTAC
AAGtgtGATGTTTGCGGTAAAAGTTTTCGTGATTCTGCTACACGGACTCG
TCACTACAAGATCCATAATCCAGCCTCGTCCACTTTGAAATGTCAACATT
GCGAGAAGACGTTCACCAGGAGAGACAGTTTGAAAAACCACATGAAAACT
CACCTCGAGGAGAAACCTTTCAAATGTCCCGTATGTTCGAGTGAGTTTGC
TTACAGAAGCTCCTTCAATCGACATTTGGCAGCCCATGACACAAGCTCTA
TGTTTATTTGTGATATATGTGGCAAAGCTTTCAATCGTTCAGATTATGTG
GAAAGTCACAAGAAACAAGTGCACTCTAGTGCACCACAACAGCTCAATCT
GTCATCCACATGTGTGGCTTTTGATGTCAATGAGATGAACAGTCAGGATG
ATGTTCCTGGAATGAGTAAAGTGAAAAAagggaagaagaagaagagaaag
aagacTTCATCAGAAGATGAGAACTTGAATGCTGTACCCATCCTCATGTC
GATGGCTGAACAAGCAGCCAAACCCAAAACCTTATCCTTGCTAAAAGAAG
CCACCACACTGATGGAAACTGACTTGCTACCACAAGAGNAAAACCTTATC
CTTGCTAAAAGAAGCCACCACACTGATGGAAACTGACTTGCTACCACAAG
AGGAAGTGACTGAAGACCTGCCCTCGCCTTCAAACCTTGGTAACGAGATC
ATCAATTTAATCGGTGAAAGTTCTGACGAGGATGCACCTTTCACTGATGA
CGACACTGGTTCGGACAGGTTGGAGTTCTTTTCGGACAGCGAATTTCAAG
AATGAGGGAAAGAAAAGGACCACGCGATGTGACGGTGACTCCAGAAACAG
CTTTCTCAGTTTGCTCGCTCTGTCCGAAATTCACGTCGTCCGTTCAAAGC
AAATACACCTTGTGTAATTCTTCAAGCAAGAAATATCAGAAATTTCTGTG
TAAACGAATGAGTATTGGACCAACTGGTAAAATCTCGACAACAAGAAGTA
CAGAAATATTCTGCAAGACCATTTGTTCTTGGAAATACAAATCCCTCGGT
AAACAAATTATCCACATGAAGTAATTCAACACCTGCGAATCATTGTTAGA
TAATTAACTTATCATAATTTATTACAAGTCATACTATTGTCCtatataat
ttatttgtgtgaCCTTATTGTTTTATAATTTGTAGTTTATAGTATTAAAG
TATTAGGAAAGACGATGATTGAATTCAAA
Run BLAST on NCBI

protein sequence of TCONS_00041971-protein

>TCONS_00041971-protein ID=TCONS_00041971-protein|Name=TCONS_00041971-protein|organism=Clytia hemisphaerica|type=polypeptide|length=250bp
MRFHSGEKPFACHLCNKPFTTKSDLKRHMKIHSIDNKSYKCDVCGKSFRD
SATRTRHYKIHNPASSTLKCQHCEKTFTRRDSLKNHMKTHLEEKPFKCPV
CSSEFAYRSSFNRHLAAHDTSSMFICDICGKAFNRSDYVESHKKQVHSSA
PQQLNLSSTCVAFDVNEMNSQDDVPGMSKVKKGKKKKRKKTSSEDENLNA
VPILMSMAEQAAKPKTLSLLKEATTLMETDLLPQEXNLILAKRSHHTDGN
Run BLAST on NCBI

transcript from alignment at sc0003127:4155..7696-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041971 ID=TCONS_00041971|Name=TCONS_00041971|organism=Clytia hemisphaerica|type=transcript|length=3542bp|location=Sequence derived from alignment at sc0003127:4155..7696- (Clytia hemisphaerica)
GTTTTCACCAAAAAGTGACATTGCTCAAAAACAAATTAGCTGTATGATTT
GTAGGCTGCTTGTAATTACCAACACTTTTTCATTGCAGCCCAAGACGATC
CATACATAGGTTTTGACGACGCAGAACACCCGTACGCAGCAAACATAGTG
GTGACTGACACTTCCTTCGCACCTCCTCAAAAGAAAGATTCATCACCAAG
CTTCCACCACGTCACCACGCCACCACCTCAAATATCAACCGTACAACCAA
CTGTCATTCGAAAACGTAAATCGATTGAATTCAAAACTAGAGAATCAAAA
GCCTTCACCAAACACTTTTATCTCCGTATTCGAGTGGTGGCTATTGAAAA
CTTGTCAATGCGCTGAGTTTTAAAACCTTAAAGTCAAAGGGTCAATGATG
ATTTTTTTAGTGTTTTTTTTTTAATTTTACTTGGCTTCTGGGTTGAGGGA
TTTCAGAATTAAAAATTTTAGGATGACTTGCTCTTTTGATACTACTTGAG
AACACGATTCTACTCGGTCACAGACAGGAAGTGTTACCGAACCTACTCAA
ACTATAATTAATTTGAACCTGTGATCAAGCTCTTGATACCCTTAATGTTT
AGGAGGTGGTAGTCTACAATGTACAATTTGCAGAAAGACCTTCAAAACAC
ATTCCAACTTGGTGACCCACATGAGATTCCACAGTGGAGAGAAACCGTTT
GCATGTCATCTTTGCAACAAACCTTTTACCACCAAGAGTGACCTCAAAAG
ACACATGAAAATACATTCCATTGACAACAAGTCTTACAAGGTGCCACCAC
TTTTCTTTTTAACTAAGAACTAACTCTATGGCTGAAACATATCAATTTTT
CACATAAGAGGTTTTTTTTGCACGGGCACAAATATCCTTAATTTGAAATA
CTTGATTCCTAACACTCCGGTGTGTAGAGACTGGTAGAGATGGATTATTT
GACAAGACAAAGAAGAGAGGAAAATATGTTCCGTCCGGGAATCGTGAAAT
AAGCCTTCAATTGTTTTTCTTTTCAGTGTGATGTTTGCGGTAAAAGTTTT
CGTGATTCTGCTACACGGACTCGTCACTACAAGATCCATAATCCAGCCTC
GTCCACTTTGAAATGTCAACATTGCGAGAAGACGTTCACCAGGAGAGACA
GTTTGAAAAACCACATGAAAACTCACCTCGAGGAGAAACCTTTCAAATGT
CCCGTATGTTCGAGTGAGTTTGCTTACAGAAGCTCCTTCAATCGACATTT
GGCAGCCCATGACACAAGCTCTATGTTTATTTGTGATATATGTGGCAAAG
CTTTCAATCGTTCAGATTATGTGGAAAGTCACAAGAAACAAGTGCACTCT
AGTGCACCACAACAGCTCAATCTGTCATCCACATGTGTGGCTTTTGATGT
CAATGAGATGAACAGTCAGGATGATGTTCCTGGAATGAGTAAAGTGAAAA
AAGGGAAGAAGAAGAAGAGAAAGAAGACTTCATCAGAAGATGAGAACTTG
AATGCTGTACCCATCCTCATGTCGATGGCTGAACAAGCAGCCAAACCCAA
AACCTTATCCTTGCTAAAAGAAGCCACCACACTGATGGAAACTGACTTGC
TACCACAAGAGNAAAACCTTATCCTTGCTAAAAGAAGCCACCACACTGAT
GGAAACTGACTTGCTACCACAAGAGGAAGTGACTGAAGACCTGCCCTCGC
CTTCAAACCTTGGTAACGAGATCATCAATTTAATCGGTGAAAGTTCTGAC
GAGGATGCACCTTTCACTGATGACGACACTGGTTCGGACAGGTTGGAGTT
CTTTTCGGACAGCGAATTTCAAGAATGAGGGAAAGAAAAGGTATCTTTAA
CACTTATTTACACCCCTTATATTATCATTTATTCATCGTTACATGAGAAA
GGTTTTCGAGTCTTTTTACAATAGAAGTTTCACACTTTGTGGTTGCAGAC
GTCACTTTTCTACCGGGTGACCCACGAAAAAGTTCGGACGTTTCTCGGCG
TCTTGAGGCCGAACAAATGTCCTAAAGTGCTTGGAGTTTTATTATTTAGN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAACTCTA
CTCGATATAAAAGACACTTGTTTGTGTGTGTGCGCACATCAACCAATTTT
CTCACTGTACGTACTCTGTCATCAAAAGTACACTCATTATCCAACCAACG
AAAAGAAGAAGCATGAATTGGCTCTTGCTTTCAACAATTTTGATTTTGAA
TATCCAACTTATAATTTGTCAAGGTATTTTCGTCTTTCTTTATTTCTTCA
AATTTTTACTTCTCTCTTTTAAGCTAAGATAAAGCATTTAATTGTATCTC
TTTTCTATAGGACCACGCGATGTGACGGTGACTCCAGAAACAGCTTTCTC
AGTTTGCTCGCTCTGTCCGAAATTCACGTCGTCCGTTCAAAGCAAATACA
CCTTGTGTAATTCTTCAAGCAAGAAATATCAGAAATTTCTGGTGAGTTGA
CCCTTGTTACTTCTTTTTCTGCAAGGTATGTAATGATATTTGATGTTCAT
CTTTTCATGTTTGAAAAATCTTCTTCTCTTTCATCTTTGCAGTGTAAACG
AATGAGTATTGGACCAACTGGTAAAATCTCGACAACAAGAAGTACAGAAA
TATTCTGCAAGGTAGGTATTTACACTTTAACATTCACTTTCGATTTGGTT
GACGACTGCTCTCACCGGCTCTCATTTGAGCACTTTTTATTAGTTCATAT
ATATCAAAGTCCTTGATACTTTGAATACTGATGCTTGATGCAGATAGTGA
ATTAGACTTTTTTCTTTCATTGTTTTACAGACCATTTGTTCTTGGAAATA
CAAATCCCTCGGTAAACAAATTATCCACATGAAGTAATTCAACACCTGCG
AATCATTGTTAGATAATTAACTTATCATAATTTATTACAAGTCATACTAT
TGTCCTATATAATTTATTTGTGTGACCTTATTGTTTTATAATTTGTAGTT
TATAGTATTAAAGTATTAGGAAAGACGATGATTGAATTCAAA

Coding sequence (CDS) from alignment at sc0003127:4155..7696-

>TCONS_00041971 ID=TCONS_00041971|Name=TCONS_00041971|organism=Clytia hemisphaerica|type=CDS|length=1506bp|location=Sequence derived from alignment at sc0003127:4155..7696- (Clytia hemisphaerica)
TGTGATGTTTGCGGTAAAAGTTTTCGTGATTCTGCTACACGGACTCGTCA
CTACAAGATCCATAATCCAGCCTCGTCCACTTTGAAATGTCAACATTGCG
AGAAGACGTTCACCAGGAGAGACAGTTTGAAAAACCACATGAAAACTCAC
CTCGAGGAGAAACCTTTCAAATGTCCCGTATGTTCGAGTGAGTTTGCTTA
CAGAAGCTCCTTCAATCGACATTTGGCAGCCCATGACACAAGCTCTATGT
TTATTTGTGATATATGTGGCAAAGCTTTCAATCGTTCAGATTATGTGGAA
AGTCACAAGAAACAAGTGCACTCTAGTGCACCACAACAGCTCAATCTGTC
ATCCACATGTGTGGCTTTTGATGTCAATGAGATGAACAGTCAGGATGATG
TTCCTGGAATGAGTAAAGTGAAAAAAGGGAAGAAGAAGAAGAGAAAGAAG
ACTTCATCAGAAGATGAGAACTTGAATGCTGTACCCATCCTCATGTCGAT
GGCTGAACAAGCAGCCAAACCCAAAACCTTATCCTTGCTAAAAGAAGCCA
CCACACTGATGGAAACTGACTTGCTACCACAAGAGNAAAACCTTATCCTT
GCTAAAAGAAGCCACCACACTGATGGAAACTGAATGAGATTCCACAGTGG
AGAGAAACCGTTTGCATGTCATCTTTGCAACAAACCTTTTACCACCAAGA
GTGACCTCAAAAGACACATGAAAATACATTCCATTGACAACAAGTCTTAC
AAGTGTGATGTTTGCGGTAAAAGTTTTCGTGATTCTGCTACACGGACTCG
TCACTACAAGATCCATAATCCAGCCTCGTCCACTTTGAAATGTCAACATT
GCGAGAAGACGTTCACCAGGAGAGACAGTTTGAAAAACCACATGAAAACT
CACCTCGAGGAGAAACCTTTCAAATGTCCCGTATGTTCGAGTGAGTTTGC
TTACAGAAGCTCCTTCAATCGACATTTGGCAGCCCATGACACAAGCTCTA
TGTTTATTTGTGATATATGTGGCAAAGCTTTCAATCGTTCAGATTATGTG
GAAAGTCACAAGAAACAAGTGCACTCTAGTGCACCACAACAGCTCAATCT
GTCATCCACATGTGTGGCTTTTGATGTCAATGAGATGAACAGTCAGGATG
ATGTTCCTGGAATGAGTAAAGTGAAAAAAGGGAAGAAGAAGAAGAGAAAG
AAGACTTCATCAGAAGATGAGAACTTGAATGCTGTACCCATCCTCATGTC
GATGGCTGAACAAGCAGCCAAACCCAAAACCTTATCCTTGCTAAAAGAAG
CCACCACACTGATGGAAACTGACTTGCTACCACAAGAGNAAAACCTTATC
CTTGCTAAAAGAAGCCACCACACTGATGGAAACTGAATGAGATTCCACAG
TGGAGAGAAACCGTTTGCATGTCATCTTTGCAACAAACCTTTTACCACCA
AGAGTGACCTCAAAAGACACATGAAAATACATTCCATTGACAACAAGTCT
TACAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025860XLOC_025860Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041971-proteinTCONS_00041971-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041971-exon-sc0003127-1575043694:7432..7696TCONS_00041971-exon-sc0003127-1575043694:7432..7696Clytia hemisphaericaexon
TCONS_00041971-exon-sc0003127-1575043694:6907..7094TCONS_00041971-exon-sc0003127-1575043694:6907..7094Clytia hemisphaericaexon
TCONS_00041971-exon-sc0003127-1575043694:5857..6670TCONS_00041971-exon-sc0003127-1575043694:5857..6670Clytia hemisphaericaexon
TCONS_00041971-exon-sc0003127-1575043694:4706..4836TCONS_00041971-exon-sc0003127-1575043694:4706..4836Clytia hemisphaericaexon
TCONS_00041971-exon-sc0003127-1575043694:4536..4604TCONS_00041971-exon-sc0003127-1575043694:4536..4604Clytia hemisphaericaexon
TCONS_00041971-exon-sc0003127-1575043694:4155..4366TCONS_00041971-exon-sc0003127-1575043694:4155..4366Clytia hemisphaericaexon
TCONS_00041971-exon-sc0003127-1510915933:7432..7696TCONS_00041971-exon-sc0003127-1510915933:7432..7696Clytia hemisphaericaexon
TCONS_00041971-exon-sc0003127-1510915933:6907..7094TCONS_00041971-exon-sc0003127-1510915933:6907..7094Clytia hemisphaericaexon
TCONS_00041971-exon-sc0003127-1510915933:5857..6670TCONS_00041971-exon-sc0003127-1510915933:5857..6670Clytia hemisphaericaexon
TCONS_00041971-exon-sc0003127-1510915933:4706..4836TCONS_00041971-exon-sc0003127-1510915933:4706..4836Clytia hemisphaericaexon
TCONS_00041971-exon-sc0003127-1510915933:4536..4604TCONS_00041971-exon-sc0003127-1510915933:4536..4604Clytia hemisphaericaexon
TCONS_00041971-exon-sc0003127-1510915933:4155..4366TCONS_00041971-exon-sc0003127-1510915933:4155..4366Clytia hemisphaericaexon
TCONS_00041971-exon-sc0003127-1491911889:7432..7696TCONS_00041971-exon-sc0003127-1491911889:7432..7696Clytia hemisphaericaexon
TCONS_00041971-exon-sc0003127-1491911889:6907..7094TCONS_00041971-exon-sc0003127-1491911889:6907..7094Clytia hemisphaericaexon
TCONS_00041971-exon-sc0003127-1491911889:5857..6670TCONS_00041971-exon-sc0003127-1491911889:5857..6670Clytia hemisphaericaexon
TCONS_00041971-exon-sc0003127-1491911889:4706..4836TCONS_00041971-exon-sc0003127-1491911889:4706..4836Clytia hemisphaericaexon
TCONS_00041971-exon-sc0003127-1491911889:4536..4604TCONS_00041971-exon-sc0003127-1491911889:4536..4604Clytia hemisphaericaexon
TCONS_00041971-exon-sc0003127-1491911889:4155..4366TCONS_00041971-exon-sc0003127-1491911889:4155..4366Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003127supercontigsc0003127:4155..7696 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.9941	10.1821	5.59132	4.75234	5.71242	4.42745	6.67639	5.3535	4.48911	3.41117	3.84803	5.23411	3.758	2.47614	2.55925	3.6424	4.32529	4.16853	1.83517	1.68065	3.42649	3.57098	5.86104	6.33664	10.7432	8.83696	1.76621	1.75029	3.87895	4.34554
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
[Close]
BLAST of TCONS_00041971 vs. Swiss-Prot (Human)
Match: ZN836 (Zinc finger protein 836 OS=Homo sapiens GN=ZNF836 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 4.146e-33
Identity = 68/161 (42.24%), Postives = 91/161 (56.52%), Query Frame = 1 
Query:  280 QCTICRKTFKTHSNLVTHMRFHSGEKPFACHLCNKPFTTKSDLKRHMKIHSIDNKSYKCDVCGKSFRDSATRTRHYKIHNPASSTLKCQHCEKTFTRRDSLKNHMKTHLEEKPFKCPVCSSEFAYRSSFNRHLAAHDTSSMFICDICGKAFNRSDYVESHK 762
            QC IC K F+ +SNLV H R H+GEKP+ C++C K F+  S+L  H  +HS  NK YKCD CGK+F+ S++ T H  IH        C  C+K F++R  L  H ++H  EKP+KC  C   F+  S    H   H     + CD CGKAF +   +  HK
Sbjct:  359 QCDICGKVFRQNSNLVNHQRIHTGEKPYKCNICGKSFSQSSNLATHQTVHS-GNKPYKCDECGKTFKRSSSLTTHQIIHT-GEKPYTCDVCDKVFSQRSQLARHQRSHTGEKPYKCNECGKVFSQTSHLVGHRRIHTGEKPYKCDKCGKAFKQGSLLTRHK 517

HSP 2 Score: 127.487 bits (319), Expect = 1.027e-30
Identity = 65/162 (40.12%), Postives = 91/162 (56.17%), Query Frame = 1 
Query:  280 QCTICRKTFKTHSNLVTHMRFHSGEKPFACHLCNKPFTTKSDLKRHMKIHSIDNKSYKCDVCGKSFRDSATRTRHYKIHNPASSTLKCQHCEKTFTRRDSLKNHMKTHLEEKPFKCPVCSSEFAYRSSFNRHLAAHDTSSMFICDICGKAFNRSDYVESHKK 765
            +C  C KTFK  S L TH   H+GEKP+ C +C K F   S+L  H +IH+ + K YKC++CGKSF  S+    H  +H+  +   KC  C KTF R  SL  H   H  EKP+ C VC   F+ RS   RH  +H     + C+ CGK F+++ ++  H++
Sbjct:  331 KCNECGKTFKQGSCLTTHQIIHTGEKPYQCDICGKVFRQNSNLVNHQRIHTGE-KPYKCNICGKSFSQSSNLATHQTVHS-GNKPYKCDECGKTFKRSSSLTTHQIIHTGEKPYTCDVCDKVFSQRSQLARHQRSHTGEKPYKCNECGKVFSQTSHLVGHRR 490

HSP 3 Score: 122.479 bits (306), Expect = 4.026e-29
Identity = 67/173 (38.73%), Postives = 88/173 (50.87%), Query Frame = 1 
Query:  280 QCTICRKTFKTHSNLVTHMRFHSGEKPFACHLCNKPFTTKSDLKRHMKIHSIDNKSYKCDVCGKSFRDSATRTRHYKIHNPASSTLKCQHCEKTFTRRDSLKNHMKTHLEEKPFKCPVCSSEFAYRSSFNRHLAAHDTSSMFICDICGKAFNRSDYVESHKKQVHSSAPQQLN 798
            +C  C K F   S+LV H R H+GEKP+ C  C K F   S L RH  IH+ + K Y+C  CGK F +++   RH +IH       KC  C K F    +L  H + H  EKPF+C  C + F   S   RHL  H     + C++CGK FN S  + +HK+      P Q N
Sbjct:  471 KCNECGKVFSQTSHLVGHRRIHTGEKPYKCDKCGKAFKQGSLLTRHKIIHTRE-KRYQCGECGKVFSENSCLVRHLRIHT-GEQPYKCNVCGKVFNYSGNLSIHKRIHTGEKPFQCNECGTVFRNYSCLARHLRIHTGQKPYKCNVCGKVFNDSGNLSNHKRIHTGEKPFQCN 641

HSP 4 Score: 120.553 bits (301), Expect = 1.790e-28
Identity = 62/154 (40.26%), Postives = 80/154 (51.95%), Query Frame = 1 
Query:  280 QCTICRKTFKTHSNLVTHMRFHSGEKPFACHLCNKPFTTKSDLKRHMKIHSIDNKSYKCDVCGKSFRDSATRTRHYKIHNPASSTLKCQHCEKTFTRRDSLKNHMKTHLEEKPFKCPVCSSEFAYRSSFNRHLAAHDTSSMFICDICGKAFNRS 741
            +C +C K F    NL  H R H+GEKPF C+ C   F   S L RH++IH+   K YKC+VCGK F DS   + H +IH       +C  C K F+    L  H K H  EKP+KC  C   +  RSS  +HL  H     + C+  G AF +S
Sbjct:  555 KCNVCGKVFNYSGNLSIHKRIHTGEKPFQCNECGTVFRNYSCLARHLRIHT-GQKPYKCNVCGKVFNDSGNLSNHKRIHT-GEKPFQCNECGKVFSYYSCLARHRKIHTGEKPYKCNDCGKAYTQRSSLTKHLIIHTGEKPYNCNEFGGAFIQS 706

HSP 5 Score: 120.553 bits (301), Expect = 1.890e-28
Identity = 61/169 (36.09%), Postives = 88/169 (52.07%), Query Frame = 1 
Query:  253 VIRKRGGSLQCTICRKTFKTHSNLVTHMRFHSGEKPFACHLCNKPFTTKSDLKRHMKIHSIDNKSYKCDVCGKSFRDSATRTRHYKIHNPASSTLKCQHCEKTFTRRDSLKNHMKTHLEEKPFKCPVCSSEFAYRSSFNRHLAAHDTSSMFICDICGKAFNRSDYVESH 759
            +I  R    QC  C K F  +S LV H+R H+GE+P+ C++C K F    +L  H +IH+ + K ++C+ CG  FR+ +   RH +IH       KC  C K F    +L NH + H  EKPF+C  C   F+Y S   RH   H     + C+ CGKA+ +   +  H
Sbjct:  518 IIHTREKRYQCGECGKVFSENSCLVRHLRIHTGEQPYKCNVCGKVFNYSGNLSIHKRIHTGE-KPFQCNECGTVFRNYSCLARHLRIHT-GQKPYKCNVCGKVFNDSGNLSNHKRIHTGEKPFQCNECGKVFSYYSCLARHRKIHTGEKPYKCNDCGKAYTQRSSLTKH 684

HSP 6 Score: 119.013 bits (297), Expect = 6.758e-28
Identity = 66/177 (37.29%), Postives = 90/177 (50.85%), Query Frame = 1 
Query:  280 QCTICRKTFKTHSNLVTHMRFHSGEKPFACHLCNKPFTTKSDLKRHMKIHSIDNKSYKCDVCGKSFRDSATRTRHYKIHNPASSTLKCQHCEKTFTRRDSLKNHMKTHLEEKPFKCPVCSSEFAYRSSFNRHLAAHDTSSMFICDICGKAFNRSDYVESHKKQVHSSAPQQLNLSST 810
            +C  C KTFK  S+L TH   H+GEKP+ C +C+K F+ +S L RH + H+ + K YKC+ CGK F  ++    H +IH       KC  C K F +   L  H   H  EK ++C  C   F+  S   RHL  H     + C++CGK FN S  +  HK+      P Q N   T
Sbjct:  415 KCDECGKTFKRSSSLTTHQIIHTGEKPYTCDVCDKVFSQRSQLARHQRSHTGE-KPYKCNECGKVFSQTSHLVGHRRIHT-GEKPYKCDKCGKAFKQGSLLTRHKIIHTREKRYQCGECGKVFSENSCLVRHLRIHTGEQPYKCNVCGKVFNYSGNLSIHKRIHTGEKPFQCNECGT 589

HSP 7 Score: 116.701 bits (291), Expect = 3.621e-27
Identity = 63/209 (30.14%), Postives = 95/209 (45.45%), Query Frame = 1 
Query:  253 VIRKRGGSLQCTICRKTFKTHSNLVTHMRFHSGEKPFACHLCNKPFTTKSDLKRHMKIHSID---------------------------NKSYKCDVCGKSFRDSATRTRHYKIHNPASSTLKCQHCEKTFTRRDSLKNHMKTHLEEKPFKCPVCSSEFAYRSSFNRHLAAHDTSSMFICDICGKAFNRSDYVESHKKQVHSSAPQQLN 798
            ++  RG   QC +C K F+ +S+LV H R H+GEKP+ C+ C K F+   +L  H +IH+ +                            K Y+CD+CGK FR ++    H +IH       KC  C K+F++  +L  H   H   KP+KC  C   F   SS   H   H     + CD+C K F++   +  H++      P + N
Sbjct:  266 IVHTRGKPYQCGVCGKIFRQNSDLVNHRRSHTGEKPYKCNECGKSFSQSYNLAIHQRIHTGEKPYKCNECGKTFKQGSCLTTHQIIHTGEKPYQCDICGKVFRQNSNLVNHQRIHT-GEKPYKCNICGKSFSQSSNLATHQTVHSGNKPYKCDECGKTFKRSSSLTTHQIIHTGEKPYTCDVCDKVFSQRSQLARHQRSHTGEKPYKCN 473

HSP 8 Score: 115.546 bits (288), Expect = 7.512e-27
Identity = 64/175 (36.57%), Postives = 87/175 (49.71%), Query Frame = 1 
Query:  280 QCTICRKTFKTHSNLVTHMRFHSGEKPFACHLCNKPFTTKSDLKRHMKIHSIDNKSYKCDVCGKSFRDSATRTRHYKIHNPASSTLKCQHCEKTFTRRDSLKNHMKTHLEEKPFKCPVCSSEFAYRSSFNRHLAAHDTSSMFICDICGKAF-NRSDYVESHKKQVHSSAPQQLNL 801
            +C  C + F + SNL  H R H+GEKP+ C+ C K F  +S L RH  IH+ + K Y C+ CGK+FR  +    H K+H       KC  C K F  R  L  H + H  EKP+KC  C   F   S  N+H   H     + C+ CGK+F +RS   +   K    S   + N+
Sbjct:  751 KCIECGQVFNSTSNLARHRRIHTGEKPYKCNECGKVFRHQSTLARHRSIHTGE-KPYVCNECGKAFRVRSILVNHQKMHT-GDKPYKCNECGKAFIERSKLVYHQRNHTGEKPYKCIECGKAFGRFSCLNKHQMIHSGEKPYKCNECGKSFISRSGLTKHQTKHTAESLKTKFNV 923

HSP 9 Score: 113.62 bits (283), Expect = 2.948e-26
Identity = 64/167 (38.32%), Postives = 85/167 (50.90%), Query Frame = 1 
Query:  280 QCTICRKTFKTHSNLVTHMRFHSGEKPFACHLCNKPFTTKSDLKRHMKIHSIDNKSYKCDVCGKSFRDSATRTRHYKIHNPASSTLKCQHCEKTFTRRDSLKNHMKTHLEEKPFKCPVCSSEFAYRSSFNRHLAAHDTSSMFICDICGKAFNRSDYVESHKKQVHSS 780
            +C+ C +TF   + L  H R H+GE P+ C  C + F + S+L RH +IH+ + K YKC+ CGK FR  +T  RH  IH      + C  C K F  R  L NH K H  +KP+KC  C   F  RS    H   H     + C  CGKAF R   +  H + +HS 
Sbjct:  723 KCSHCGRTFSHITGLTYHQRRHTGEMPYKCIECGQVFNSTSNLARHRRIHTGE-KPYKCNECGKVFRHQSTLARHRSIHTGEKPYV-CNECGKAFRVRSILVNHQKMHTGDKPYKCNECGKAFIERSKLVYHQRNHTGEKPYKCIECGKAFGRFSCLNKH-QMIHSG 886

HSP 10 Score: 107.457 bits (267), Expect = 3.520e-24
Identity = 61/189 (32.28%), Postives = 93/189 (49.21%), Query Frame = 1 
Query:  235 STVQPTVIRKRGGSLQCTICRKTFKTHSNLVTHMRFHSGEKPFACHLCNKPFTTKSDLKRHMKIHSIDNKSYKCDVCGKSFRDSATRTRHYKIHNPASSTLKCQHCEKTFTRRDSLKNHMKTHLEEKPFKCPVCSSEFAYRSSFNRHLAAHDTSSMFICDICGKAFNRSDYVESHKKQVHSSAPQQLNL 801
            + ++ T IR++     C  C K F+  S+L+ H   H+ EKP+ C+ C K F   S L  H  +H+   K Y+C VCGK FR ++    H + H       KC  C K+F++  +L  H + H  EKP+KC  C   F   S    H   H     + CDICGK F ++  + +H++      P + N+
Sbjct:  206 TQLEKTHIREK--PYMCKGCGKAFRVSSSLINHQMVHTTEKPYKCNECGKAFHRGSLLTIHQIVHT-RGKPYQCGVCGKIFRQNSDLVNHRRSHT-GEKPYKCNECGKSFSQSYNLAIHQRIHTGEKPYKCNECGKTFKQGSCLTTHQIIHTGEKPYQCDICGKVFRQNSNLVNHQRIHTGEKPYKCNI 390

HSP 11 Score: 106.301 bits (264), Expect = 8.041e-24
Identity = 70/228 (30.70%), Postives = 99/228 (43.42%), Query Frame = 1 
Query:  280 QCTICRKTFKTHSNLVTHMRFHSGEKPFACHLCNKPFTTKSDLKRHMKIHSIDNKSYKCDVCGKSFRDSATRTRHYKIH--------------------------NPASST-LKCQHCEKTFT---------RR-------------------DSLKNHMKTHLEEKPFKCPVCSSEFAYRSSFNRHLAAHDTSSMFICDICGKAFNRSDYVESHKKQVHSSAPQQLN 798
            +C +C K F    NL  H R H+GEKPF C+ C K F+  S L RH KIH+ + K YKC+ CGK++   ++ T+H  IH                          NP      KC HC +TF+         RR                    +L  H + H  EKP+KC  C   F ++S+  RH + H     ++C+ CGKAF     + +H+K      P + N
Sbjct:  611 KCNVCGKVFNDSGNLSNHKRIHTGEKPFQCNECGKVFSYYSCLARHRKIHTGE-KPYKCNDCGKAYTQRSSLTKHLIIHTGEKPYNCNEFGGAFIQSSKLARYHRNPTGEKPHKCSHCGRTFSHITGLTYHQRRHTGEMPYKCIECGQVFNSTSNLARHRRIHTGEKPYKCNECGKVFRHQSTLARHRSIHTGEKPYVCNECGKAFRVRSILVNHQKMHTGDKPYKCN 837

HSP 12 Score: 101.679 bits (252), Expect = 2.374e-22
Identity = 58/173 (33.53%), Postives = 82/173 (47.40%), Query Frame = 1 
Query:  280 QCTICRKTFKTHSNLVTHMRFHSGEKPFACHLCNKPFTTKSDLKRHMKIHSIDNKSYKCDVCGKSFRDSATRTRHYKIHNPASSTLKCQHCEKTFTRRDSLKNHMKTHLEEKPFKCPVCSSEFAYRSSFNRHLAAHDTSSMFICDICGKAFNRSDYVESHKKQVHSSAPQQLN 798
            +C  C K FK  S L  H   H+ EK + C  C K F+  S L RH++IH+ + + YKC+VCGK F  S   + H +IH       +C  C   F     L  H++ H  +KP+KC VC   F    + + H   H     F C+ CGK F+    +  H+K      P + N
Sbjct:  499 KCDKCGKAFKQGSLLTRHKIIHTREKRYQCGECGKVFSENSCLVRHLRIHTGE-QPYKCNVCGKVFNYSGNLSIHKRIHT-GEKPFQCNECGTVFRNYSCLARHLRIHTGQKPYKCNVCGKVFNDSGNLSNHKRIHTGEKPFQCNECGKVFSYYSCLARHRKIHTGEKPYKCN 669

HSP 13 Score: 87.8113 bits (216), Expect = 4.782e-18
Identity = 53/173 (30.64%), Postives = 79/173 (45.66%), Query Frame = 1 
Query:  328 THMRFHSGEKPFACHLCNKPFTTKSDLKRHMKIHSIDNKSYKCDVCGKSFRDSATRTRHYKIHNPASSTLKCQHCEKTFTRRDSLKNHMKTHLEEKPFKCPVCSSEFAYRSSFNRHLAAHDTSSMFICDICGKAFNRSDYVESHKKQVHSSAPQQLNLSSTCVAFDVNEMNSQ 846
            TH+R    EKP+ C  C K F   S L  H  +H+ + K YKC+ CGK+F   +  T H  +H       +C  C K F +   L NH ++H  EKP+KC  C   F+   +   H   H     + C+ CGK F +   + +H+       P Q ++       + N +N Q
Sbjct:  211 THIR----EKPYMCKGCGKAFRVSSSLINHQMVHTTE-KPYKCNECGKAFHRGSLLTIHQIVHTRGKP-YQCGVCGKIFRQNSDLVNHRRSHTGEKPYKCNECGKSFSQSYNLAIHQRIHTGEKPYKCNECGKTFKQGSCLTTHQIIHTGEKPYQCDICGKVFRQNSNLVNHQ 377
The following BLAST results are available for this feature:
BLAST of TCONS_00041971 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN8364.146e-3342.24Zinc finger protein 836 OS=Homo sapiens GN=ZNF836 ... [more]
back to top