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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041947 ID=TCONS_00041947|Name=TCONS_00041947|organism=Clytia hemisphaerica|type=transcript|length=714bp
NGGAGATTTTCGGTCTCGGTAATATGGAAATGATGGACGATGATGTACTC
GTCGAATATCTTGAACCTCGGTAAACACATCCTCGGCAATCGGATAAATT
GTCGTTTCCCGAGTTTCCCGATAAACTGGTTGATGATAAACGAATTTTGA
ATGTTCAACAGGAGATACGTTCATCAAACACCGTTCAATGTCTTCTGGTC
GGTATATCTTTGTCTTTGTTTCTTCCAATGGGCTTGTCGGTGATCGGGAA
GGTCGGTAAGAACTGATCGGAGGAGAAATTGATGGTGAGAATATTTGTGG
TACTGGACGGCTATGGCGTATATCAGATATCTGTCTTTTAATTTTGATAT
GATTGTTATTACTTGGGAATTCGATTTTAGTCTGTTTGCTTTGTGCACAC
ATATTGGGTGAACTTGGTTTTACGttactgaaaaattctttggtTATTTT
GGGAATGTTTAATTCGACTACTGGTCTGGCTGGTATATCAATGGATTTTC
CATCCGGCGATTCTCGCTTTTTAACGAAGATAGGATTCTCAGTACATGGA
GTAACAGGTGTTTTGACTTTAGTTGTTGTCGAATGTACTAAGTTTGCTGT
CGGTATTACTATTGTCGTTTTCATCGATGAATTATTGTTATTCAAGTCTA
GTTTcaagtttttggattttttttctagcAGAAATTTCTTCATGAAGTCA
TGGTTATCGTGTTG Run BLAST on NCBI protein sequence of TCONS_00041947-protein >TCONS_00041947-protein ID=TCONS_00041947-protein|Name=TCONS_00041947-protein|organism=Clytia hemisphaerica|type=polypeptide|length=238bp
QHDNHDFMKKFLLEKKSKNLKLDLNNNNSSMKTTIVIPTANLVHSTTTKV
KTPVTPCTENPIFVKKRESPDGKSIDIPARPVVELNIPKITKEFFSNVKP
SSPNMCAQSKQTKIEFPSNNNHIKIKRQISDIRHSRPVPQIFSPSISPPI
SSYRPSRSPTSPLEETKTKIYRPEDIERCLMNVSPVEHSKFVYHQPVYRE
TRETTIYPIAEDVFTEVQDIRRVHHRPSFPYYRDRKSX Run BLAST on NCBI transcript from alignment at sc0003110:1..714 Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041947 ID=TCONS_00041947|Name=TCONS_00041947|organism=Clytia hemisphaerica|type=transcript|length=714bp|location=Sequence derived from alignment at sc0003110:1..714 (Clytia hemisphaerica)
CAACACGATAACCATGACTTCATGAAGAAATTTCTgctagaaaaaaaatc
caaaaacttgAAACTAGACTTGAATAACAATAATTCATCGATGAAAACGA
CAATAGTAATACCGACAGCAAACTTAGTACATTCGACAACAACTAAAGTC
AAAACACCTGTTACTCCATGTACTGAGAATCCTATCTTCGTTAAAAAGCG
AGAATCGCCGGATGGAAAATCCATTGATATACCAGCCAGACCAGTAGTCG
AATTAAACATTCCCAAAATAaccaaagaatttttcagtaaCGTAAAACCA
AGTTCACCCAATATGTGTGCACAAAGCAAACAGACTAAAATCGAATTCCC
AAGTAATAACAATCATATCAAAATTAAAAGACAGATATCTGATATACGCC
ATAGCCGTCCAGTACCACAAATATTCTCACCATCAATTTCTCCTCCGATC
AGTTCTTACCGACCTTCCCGATCACCGACAAGCCCATTGGAAGAAACAAA
GACAAAGATATACCGACCAGAAGACATTGAACGGTGTTTGATGAACGTAT
CTCCTGTTGAACATTCAAAATTCGTTTATCATCAACCAGTTTATCGGGAA
ACTCGGGAAACGACAATTTATCCGATTGCCGAGGATGTGTTTACCGAGGT
TCAAGATATTCGACGAGTACATCATCGTCCATCATTTCCATATTACCGAG
ACCGAAAATCTCCN Coding sequence (CDS) from alignment at sc0003110:1..714 >TCONS_00041947 ID=TCONS_00041947|Name=TCONS_00041947|organism=Clytia hemisphaerica|type=CDS|length=714bp|location=Sequence derived from alignment at sc0003110:1..714 (Clytia hemisphaerica)
CAACACGATAACCATGACTTCATGAAGAAATTTCTgctagaaaaaaaatc
caaaaacttgAAACTAGACTTGAATAACAATAATTCATCGATGAAAACGA
CAATAGTAATACCGACAGCAAACTTAGTACATTCGACAACAACTAAAGTC
AAAACACCTGTTACTCCATGTACTGAGAATCCTATCTTCGTTAAAAAGCG
AGAATCGCCGGATGGAAAATCCATTGATATACCAGCCAGACCAGTAGTCG
AATTAAACATTCCCAAAATAaccaaagaatttttcagtaaCGTAAAACCA
AGTTCACCCAATATGTGTGCACAAAGCAAACAGACTAAAATCGAATTCCC
AAGTAATAACAATCATATCAAAATTAAAAGACAGATATCTGATATACGCC
ATAGCCGTCCAGTACCACAAATATTCTCACCATCAATTTCTCCTCCGATC
AGTTCTTACCGACCTTCCCGATCACCGACAAGCCCATTGGAAGAAACAAA
GACAAAGATATACCGACCAGAAGACATTGAACGGTGTTTGATGAACGTAT
CTCCTGTTGAACATTCAAAATTCGTTTATCATCAACCAGTTTATCGGGAA
ACTCGGGAAACGACAATTTATCCGATTGCCGAGGATGTGTTTACCGAGGT
TCAAGATATTCGACGAGTACATCATCGTCCATCATTTCCATATTACCGAG
ACCGAAAATCTCCN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041947-exon-sc0003110-1491911889:1..714 | TCONS_00041947-exon-sc0003110-1491911889:1..714 | Clytia hemisphaerica | exon |
| TCONS_00041947-exon-sc0003110-1510915933:1..714 | TCONS_00041947-exon-sc0003110-1510915933:1..714 | Clytia hemisphaerica | exon |
| TCONS_00041947-exon-sc0003110-1575043694:1..714 | TCONS_00041947-exon-sc0003110-1575043694:1..714 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003110 | supercontig | sc0003110:1..714 . |
Blast
The following BLAST results are available for this feature:
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