TCONS_00041858 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041858
Unique NameTCONS_00041858
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1753

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041858 ID=TCONS_00041858|Name=TCONS_00041858|organism=Clytia hemisphaerica|type=transcript|length=1753bp
GGAGTATTCAACTTTATCGAagttttattttacattttgcATTCAATCTG
TGAATCTTTGGTTTCtgaattaattattaaagattAATTGACATGCATGA
CTTCTATCACGATTGATAGGTTAATACAATGTTTTTACATGAGGCTGATT
AATCTCTCAATTCAAGTTCTATTTTTATCACAttcataataaaatctttt
tcaataattttttccttAAACCTTTTGGTTCATTAAGTGGAAAAAACGTT
TTCGACAAATATGGCTAAATCGATATTTttctgttttccttttttcttga
GTTTAATATTCTTTGTCTATGGAGATAAAAGAGTAACACGAAATTCTACC
AAAGTAATTGACCAAACAACTTATACAATTCGCGAGTATCGTTTCTCGAA
ATATCCAAATGTTGAACCGACTTCATTTGCACAAGGGAGTAGCCTTCAAC
AGCTGACGTCTGTAACACCAAGTGATTGTGGAACTTCATGTAAAGCAAAA
GAAGAATGCGTTTCGTTTTTGTATTATCGAGTCCAACCACCAACCTGTAC
ATTGCTCGATAGTCCAATCAATCGGCATAGCGTCAGAAGGAATATGAGTG
TTGATTACTACGAAATACAGAATAAATGCAGTGAAAATACTACAATTTGT
AACTTTGGGACTTGTTACCCTCACTTCGGAAATGATTCTTATACATGTTA
TTGCAAAGGAAAATCGTATGGAAAAAATTGTGAAAGGACTAACTCTGCGG
AAAACCCACATGTCACATGTCAAGAAGTGAAACAATTAATGCCTGAAGCA
CCAAGTGGAATGTATTGGGTTGGCAGTGTTGGTGCAAAAAACCTATTATT
TTGTGATATGATAACTGATGGAGGAGGTTGGTTAAGAGTGGGACAAATCA
ATATTCGAAATAACGAAGAGGCTAATGCTTATAATTTCAATGCTATCGTC
AAACCTTTTACCAGTTCAATTCACAACCTGTCAACGTCCAATTATCTCTT
AAGCGGACGTCGATTTGAAGTTCTAAATCAAATGGCAAGAATCACACAAT
TTCGCGTTTATTGTCGCAAGGTGACACGTGGACGCACAAACCATTACACT
TTCGATGTCTCAACATCCAGTGGTTCAAATAACAAAATGTTTGACCATGT
CTTAAAGAATGATGAACCGCCACCACTCAACTTATgtggaaaaatcaaat
ttctgcCAGATGATGATTCGAAGATTCAAACTTTTGACTGCGCTGATTTA
GTACCAATAATTGATTATGATGATAACAAAATTCGTTACCGCTTGTATGC
CGGCCTAAAAAAGGCTTCCGCTTCCACTGGAAGAAAAACGGCCGGTACAA
CCGTTCTTAAATGTGATGAAAATGACAGTAATGATAAAATTGGACAATGG
ATGTTCTTTATTCGATAATACCTCAACTCGTTGGTGTTTAAagcctttct
caagcaagaaaagtgaagccttgCGCCGTATTTcgaatgacggattgaat
ctagaactttctttgtttttttgagcGGTGTATTTTTCCAATTCCAGCGA
CAGGTTTTACTTTCGATTTGGCGATTGTGTGAAAATCACGCAGGCcacgc
gttctggatgggaaataagtggcttcattttccaACCAGGAGTTTCGggt
ctagccccttcggggctttgaaatcaatgtcTCAACTACTTGATTAATTT
TCGCAACCCGTGGCAGACTTTTTAAGGGACGGTGAAAAGAAAGGAAATTT
GGG
Run BLAST on NCBI

protein sequence of TCONS_00041858-protein

>TCONS_00041858-protein ID=TCONS_00041858-protein|Name=TCONS_00041858-protein|organism=Clytia hemisphaerica|type=polypeptide|length=385bp
MAKSIFFCFPFFLSLIFFVYGDKRVTRNSTKVIDQTTYTIREYRFSKYPN
VEPTSFAQGSSLQQLTSVTPSDCGTSCKAKEECVSFLYYRVQPPTCTLLD
SPINRHSVRRNMSVDYYEIQNKCSENTTICNFGTCYPHFGNDSYTCYCKG
KSYGKNCERTNSAENPHVTCQEVKQLMPEAPSGMYWVGSVGAKNLLFCDM
ITDGGGWLRVGQINIRNNEEANAYNFNAIVKPFTSSIHNLSTSNYLLSGR
RFEVLNQMARITQFRVYCRKVTRGRTNHYTFDVSTSSGSNNKMFDHVLKN
DEPPPLNLCGKIKFLPDDDSKIQTFDCADLVPIIDYDDNKIRYRLYAGLK
KASASTGRKTAGTTVLKCDENDSNDKIGQWMFFIR
Run BLAST on NCBI

transcript from alignment at sc0003050:5726..11784-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041858 ID=TCONS_00041858|Name=TCONS_00041858|organism=Clytia hemisphaerica|type=transcript|length=6059bp|location=Sequence derived from alignment at sc0003050:5726..11784- (Clytia hemisphaerica)
GGAGTATTCAACTTTATCGAAGTTTTATTTTACATTTTGCATTCAATCTG TGAATCTTTGGTTTCTGAATTAATTATTAAAGATTAATTGACATGCATGA CTTCTATCACGATTGATAGGTTAATACAATGTTTTTACATGAGGCTGATT AATCTCTCAATTCAAGTTCTATTTTTATCACATTCATAATAAAATCTTTT TCAATAATTTTTTCCTTAAACCTTTTGGTTCATTAAGTGGAAAAAACGTT TTCGACAAATATGGCTAAATCGATATTTTTCTGTTTTCCTTTTTTCTTGA GTTTAATATTCTTTGTCTATGGAGATAAAAGAGTAACACGAAATTCTACC AAAGTAATTGACCAAACAACTTATACAATTCGCGAGTATCGTTTCTCGAA ATATCCAAATGTTGAACCGACTTCATTTGCACAAGGGAGTAGCCTTCAAC AGCTGACGTCTGTAACACCAAGGTAAACACTTTTTTTGGCCCGCGCAGGG TCTTTGCTCTGCTTTTGATAGGCTGGAGACCCGGGGGATACTAGGTTTGC GAGGTGACGGATATGTCTGAGCCAAAAATTGAAAATCGACCCTTGGAGAG AGGGAATTAAATTGGCGTTTTTGGGACCCTTGGAGAGACGTTTCTCAAAA TTTTGGTCGATTTTCACGACCCTTTTGAGAGAGGAAATTTCGATGTTCAT GAATTTTGGACTCCGTAAGTTTTTTTGGTTTTTGTACACCTTTGAGAGAC TTTCGAGAGAGTGAAAAAGGGATCCTTATGGCTCGCACATACCTAGGCTT CTGCTCATCCTTTAGCGAAAAAGTTTCTTATAATAGGAAGTATAGGTCTG CGAATCAGACTAGCACATACCCGGCACCCATTTTGCCAAAGTACCCCCCG GGACTGGAGAATGAAAGATTAACTGCGGCTGACTTCTTAGCGAGCTCAGT GTATTGATTAGCGTTTAAATATACTTGAATCGGCGAACCAAACTTTTAAT CCGATTTTGATTATTTTTTTGCACTTTGGAAATTGAAGAAATTCTCTTTT TTAGGAACAATTTTCTCAGAAGAACATAAGGCTCAATTTTGGCTAAAACC TATTAGTGGGTTGTCTAGCATAATTTAAAAGAAAAAATTAGATCCAGCTG AAACTTTCTCTAGACCTTCTCTATAGGATGGTTATGCCTCAGGAAAAATT CCCCTAAAATCCCACTGGTGGAACATCCTTGTTTTGGGACATTTCTTTTT TCCCCAGGCAAAACCCTGAGGGCAAATTTTTTGAAAATTTCAAATNNAGT CAAGATAATTCACGCAGAAGATGCTATATATGGTCAATTTTAGACCAAAA TGTGGCGAAAAGTGGAACTTGCGCATGAAATATCTCGAGTTAGGTAACGA AATCGGCTATACCCGTTTAAAAGTCTTCTTTCGCTTTCGAATAGTATACT TGATAATGTCTGAAAATGAGTTTTGAATTTTCAAAAAATTTCGCCCTTAG GATTTTGCATGGGGAAAAAGAAATTGCCCTAAAAAGGGATGTTCCACCAG TGGGATTTTAGGGGAATTTTTCCTGAGGCATAACCATCCTATAGAAAAGG TCTGGAGAAAGTTTCAGCTGGATCTTATTCTTTTCCTACAAACAAGCTGT ATTTTTGTAACACGACCACATTATATGAAAAATTAAAGAGAATACCAGCC ATTTTTTATCTTCCAATATGTTAGAGAGCTTGGGTTTTTCTGTCTGCTTA CACTCAATTTTGATTGAAAAATTAAAATACAGTTTCACAAATTCACAGGC CAAAGTGCAGACACACGGGTCTCTATGAATTGCCCATACATTTCGGGTTA TTATTGCATTGTTATTATATAGACAGACATTCAACATTAGTGACACTTAC AATCATATTCAAACTTTTTTTCTACCCAGGCCATACACTACCTTCGAATT CTTGAACTGTTCTTTGAAGATGAGAACTCTGTCGATAAGTTTTTGGACCT ATACCCCGGTGGAGGTCCTATTCTCAACTTCAGTTGAGCTACAATCTGAC AATGTCTGTGTCTGGATGTCTGTCTGTCACAAAAACTTTAGGGCAGTAGC CTGGAGACTTCAAAAATGCTTGGATTTGGCTGAAATTTGGCACAATTGTT CCTTGGTGAATATCTGGGAGCAATTTTTTCATTCTTTGAAAATTTTGATT TTTGGGGCCTGGGGACGAGTTTTTTTCGCCAAAACGAGGCTAAAACTTTG GGTCAGCCTGGGGACTTCAAAATGGTCGGATTTGACTGAAATTTGGCACA CTTGTTCCTTGGGTGAATATCTGGGGTAGATTTTTTCATTTTTTGAAAAT TTTGATTTTTGGGGCTTGGGGACGAGTTTTTCGCCAAAAGGAGGCTAAAG TAAAACTTTGGGGCAGCCTGGAGACTTCAAAAATTGTTCTATTTGGCTGA AATTTTGCACACTTGTTCCTTGGGTGAATATCTGGGGTTCTACAATTGGG CCTATGAATAGTTTGAAGGCACTGTGCGTTGCACACGTTCGACTATAAAT TAACTGTTGTCTGTTCATTCGTCCGTTCGTAATGAGCTTTTCTCGAGTTT GGCTCATTAGTTTCTTCTGATTTTTTGCACAATGATGCAAAATGTCAATG CCCAAAATGTGACGGAGCCCGATTTTCGGGGGAAAAATATTTTGCTTGAA TTTCAGCTAAAAAAAGTGTTTTTGGATCATTAATTTTTCCTGATTTCTTG CATTTTAGTAGGCAAGCATCATCGGTAAAAGATGGCTCAAGCAGATTTTT CACGAAAGAAAATTTTCGGCTCAAAAACGCATCTTTATCTATAAGAATCA CTACTTATAAGCATATATCGATGTTCTTAGACAAATTACTCAATTGATGA GATGATGATATTCTTTTCCTTCCAATTTCCTCCCTTAAATCTGCCCCAAT GGGCATGGGGGGACAATCAATAATGAAAACAAATGACGAATTTTTATAAA TTGTCACTATTTGTGTTCCGAATGATTGTTTTACCGGTCACACTCAAGTA GATATCAATTATAAATGTGTTAAATGCATAACTAGGTAGGTCCATGAAAG TATCCCTTGTTCTATGTACATTACCCGATGTATATTTATGAACTTAGCCG TTTTACTTTCTTAATTATATCTGCTTTTGAACTACAAATATAGTCAGATA ATGGAAAATCGTATTTGACTTGTTTACAGTGATTGTGGAACTTCATGTAA AGCAAAAGAAGAATGCGTTTCGTTTTTGTATTATCGAGTCCAACCACCAA CCTGTACATTGCTCGATAGTCCAATCAATCGGCATAGCGTCAGAAGGAAT ATGAGTGTTGATTACTACGAAATACAGGTGACTTGTTTTTTTCACAAAAC TTTCAATTTAATTCTTCATAAAAAAATCATTAAATTTTATGGCTGGGGCT TAGGCACTAATTATTTGGTAATTGTTTGAATACGAGGCAAGTGATGTTCG TGACGTAGTTTATGAAAAGGTCTATTAGGCCTATGAATAATTTGAAGGTT TAGCCCAATGCGTTAGGCACGTTCGATAATTTTTAGATTATAGCCAAAAT GAACTTCTTATTCTAGTACCATGATGTTTTATGATTTTTTCATATATTTC AGAATAAATGCAGTGAAAATACTACAATTTGTAACTTTGGGACTTGTTAC CCTCACTTCGGAAATGATTCTTATACATGTTATTGCAAAGGAAAATCGTA TGGAAAAAATTGTGAAAGGACTAACTCTGCGGAAAACCCACATGTCACAT GTCAAGAAGTGAAACAATTAATGCCTGAAGCACCAAGTGGAATGTATTGG GTTGGCAGTGTTGGTGCAAAAAACCTATTATTTTGTGATATGATAACTGA TGGAGGTTAGTTTTATCCCTACTCTACATACAGTATATAGCCCCCAAAAA TAGGTGGCATCCAATACTGTATGTAGCTTCTGATTCAAATAAGAAGTCTG ACCTGGTAGTCGAAATGAGATTATTTTGAAACCTAAATTTTTTTGACCAA GGAATACTGTGAACAATGGGATCTTCCAGAAAAAATATGTTCATGGGGGG TGGAGGATGAATTGTCCAGGGGTATTGAAAAAATACCAAAAAATGTCCAG GGGTAATTCATGAAAAAAATAATATATCCTCCACCCCCCATGAACGGGTT TTTTCTGGAAGAGCCCATTGAACCAGGAAATTTATTTATAAATCATCATC TTTCAAATTATAATTCCAGTCAAAATTTTAAATCGAACATGATTAAAATT TTTTTATATGGATAGATAGTCGCACTTGATTCTTCAATGACACGACGAAA TTTGTCTTCCAGTTCTGCCTGTCTGCCTGACTGTTTTCATTTCGTTTAGA TTAAGTCCAGTGTCAGCATGAAAAATATTGTTGAGTGAAAACTTTTGAAA AATAACTCAGTTTTGCTGAAGTTTGAAAGCAGAGAAATACTTCAAAACTA ACCGGCATATTGGAGGTCATACCTTAGGCGTACAAACTTTCGCGAGCAGA AACTTTTGCGAGGACGAAAAATCGGGAAATACACGACATATACTTTCGCG AATTTAACGGAAAAACGTTTTTCGCGAGCATAAATTTTCGCGAATCAAGA CGGAAAAATTGAGAATTCTCACATGAAAAAACGGCTTAGAGGGACAAATA CTTCTTGGATTGGCTTGAAATATTTGTTCTTTGACTTATTAGTCTTTTAG CAGGCTAAAAAGTGCCATAAAAGTTACATTTTATTCAAAGTTTGAAGTTT TACAGATTTTCTCTTTTGTCAAGAATCTTTCGCGAGCATAAACTTTCGCG AATGGCCCTTCCTAGAATTTTTAAAGACATTTACTTTCGCGAAAAGGGCC AAAATTCGCGAAAATCACAAAAGTTTCTGCTCGCGAAAGTTTGTACGCTT AAAGTATACTGTTTGTACTACATTGTTTTTTCTAAAATTTAAAATGGAGC CGAAAATCCCTTTTCAGCAAAGTCAACCCAAGATCATGGGGATTTATTCA CACAATTAATACGAAATAACACCCTACGTTGCAGAAAGAGCCCTCGCGCA CTTTTGTCAATTATTTGCCGTCGGTGGTCTTATAAAGACACTGTTAATTA AATATTGCTTTTTTCATGCCATATTTTAGGAGGTTGGTTAAGAGTGGGAC AAATCAATATTCGAAATAACGAAGAGGCTAATGCTTATAATTTCAATGCT ATCGTCAAACCTTTTACCAGTTCAATTCACAACCTGTCAACGTCCAATTA TCTCTTAAGCGGACGTCGATTTGAAGTTCTAAATCAAATGGCAAGAATCA CACAATTTCGCGTTTATTGTCGCAAGGTGACACGTGGACGCACAAACCAT TACACTTTCGATGTCTCAACATCCAGTGGTTCAAATAACAAAATGTTTGA CCATGTCTTAAAGAATGATGAACCGCCACCACTCAACTTATGTGGAAAAA TCAAATTTCTGCCAGATGATGATTCGAAGATTCAAACTTTTGACTGCGCT GATTTAGTACCAATAATTGATTATGATGATAACAAAATTCGTTACCGCTT GTATGCCGGCCTAAAAAAGGCTTCCGCTTCCACTGGAAGAAAAACGGCCG GTACAACCGTTCTTAAATGTGATGAAAATGACAGTAATGATAAAATTGGA CAATGGATGTTCTTTATTCGATAATACCTCAACTCGTTGGTGTTTAAAGC CTTTCTCAAGCAAGAAAAGTGAAGCCTTGCGCCGTATTTCGAATGACGGA TTGAATCTAGAACTTTCTTTGTTTTTTTGAGCGGTGTATTTTTCCAATTC CAGCGACAGGTTTTACTTTCGATTTGGCGATTGTGTGAAAATCACGCAGG CCACGCGTTCTGGATGGGAAATAAGTGGCTTCATTTTCCAACCAGGAGTT TCGGGTCTAGCCCCTTCGGGGCTTTGAAATCAATGTCTCAACTACTTGAT TAATTTTCGCAACCCGTGGCAGACTTTTTAAGGGACGGTGAAAAGAAAGG AAATTTGGG

Coding sequence (CDS) from alignment at sc0003050:5726..11784-

>TCONS_00041858 ID=TCONS_00041858|Name=TCONS_00041858|organism=Clytia hemisphaerica|type=CDS|length=4632bp|location=Sequence derived from alignment at sc0003050:5726..11784- (Clytia hemisphaerica)
GAGGTTGGTTAAGAGTGGGACAAATCAATATTCGAAATAACGAAGAGGCT
AATGCTTATAATTTCAATGCTATCGTCAAACCTTTTACCAGTTCAATTCA
CAACCTGTCAACGTCCAATTATCTCTTAAGCGGACGTCGATTTGAAGTTC
TAAATCAAATGGCAAGAATCACACAATTTCGCGTTTATTGTCGCAAGGTG
ACACGTGGACGCACAAACCATTACACTTTCGATGTCTCAACATCCAGTGG
TTCAAATAACAAAATGTTTGACCATGTCTTAAAGAATGATGAACCGCCAC
CACTCAACTTATGTGGAAAAATCAAATTTCTGCCAGATGATGATTCGAAG
ATTCAAACTTTTGACTGCGCTGATTTAGTACCAATAATTGATTATGATGA
TAACAAAATTCGTTACCGCTTGTATGCCGGCCTAAAAAAGGCTTCCGCTT
CCACTGGAAGAAAAACGGCCGGTACAACCGTTCTTAAATGTGATGAAAAT
GACAGTAATGATAAAATTGGACAATGGATGTTCTTTATTCGATAAAATAA
ATGCAGTGAAAATACTACAATTTGTAACTTTGGGACTTGTTACCCTCACT
TCGGAAATGATTCTTATACATGTTATTGCAAAGGAAAATCGTATGGAAAA
AATTGTGAAAGGACTAACTCTGCGGAAAACCCACATGTCACATGTCAAGA
AGTGAAACAATTAATGCCTGAAGCACCAAGTGGAATGTATTGGGTTGGCA
GTGTTGGTGCAAAAAACCTATTATTTTGTGATATGATAACTGATGGAGTG
ATTGTGGAACTTCATGTAAAGCAAAAGAAGAATGCGTTTCGTTTTTGTAT
TATCGAGTCCAACCACCAACCTGTACATTGCTCGATAGTCCAATCAATCG
GCATAGCGTCAGAAGGAATATGAGTGTTGATTACTACGAAATACAGATGG
CTAAATCGATATTTTTCTGTTTTCCTTTTTTCTTGAGTTTAATATTCTTT
GTCTATGGAGATAAAAGAGTAACACGAAATTCTACCAAAGTAATTGACCA
AACAACTTATACAATTCGCGAGTATCGTTTCTCGAAATATCCAAATGTTG
AACCGACTTCATTTGCACAAGGGAGTAGCCTTCAACAGCTGACGTCTGTA
ACACCAAGGAGGTTGGTTAAGAGTGGGACAAATCAATATTCGAAATAACG
AAGAGGCTAATGCTTATAATTTCAATGCTATCGTCAAACCTTTTACCAGT
TCAATTCACAACCTGTCAACGTCCAATTATCTCTTAAGCGGACGTCGATT
TGAAGTTCTAAATCAAATGGCAAGAATCACACAATTTCGCGTTTATTGTC
GCAAGGTGACACGTGGACGCACAAACCATTACACTTTCGATGTCTCAACA
TCCAGTGGTTCAAATAACAAAATGTTTGACCATGTCTTAAAGAATGATGA
ACCGCCACCACTCAACTTATGTGGAAAAATCAAATTTCTGCCAGATGATG
ATTCGAAGATTCAAACTTTTGACTGCGCTGATTTAGTACCAATAATTGAT
TATGATGATAACAAAATTCGTTACCGCTTGTATGCCGGCCTAAAAAAGGC
TTCCGCTTCCACTGGAAGAAAAACGGCCGGTACAACCGTTCTTAAATGTG
ATGAAAATGACAGTAATGATAAAATTGGACAATGGATGTTCTTTATTCGA
TAAAATAAATGCAGTGAAAATACTACAATTTGTAACTTTGGGACTTGTTA
CCCTCACTTCGGAAATGATTCTTATACATGTTATTGCAAAGGAAAATCGT
ATGGAAAAAATTGTGAAAGGACTAACTCTGCGGAAAACCCACATGTCACA
TGTCAAGAAGTGAAACAATTAATGCCTGAAGCACCAAGTGGAATGTATTG
GGTTGGCAGTGTTGGTGCAAAAAACCTATTATTTTGTGATATGATAACTG
ATGGAGTGATTGTGGAACTTCATGTAAAGCAAAAGAAGAATGCGTTTCGT
TTTTGTATTATCGAGTCCAACCACCAACCTGTACATTGCTCGATAGTCCA
ATCAATCGGCATAGCGTCAGAAGGAATATGAGTGTTGATTACTACGAAAT
ACAGATGGCTAAATCGATATTTTTCTGTTTTCCTTTTTTCTTGAGTTTAA
TATTCTTTGTCTATGGAGATAAAAGAGTAACACGAAATTCTACCAAAGTA
ATTGACCAAACAACTTATACAATTCGCGAGTATCGTTTCTCGAAATATCC
AAATGTTGAACCGACTTCATTTGCACAAGGGAGTAGCCTTCAACAGCTGA
CGTCTGTAACACCAAGGAGGTTGGTTAAGAGTGGGACAAATCAATATTCG
AAATAACGAAGAGGCTAATGCTTATAATTTCAATGCTATCGTCAAACCTT
TTACCAGTTCAATTCACAACCTGTCAACGTCCAATTATCTCTTAAGCGGA
CGTCGATTTGAAGTTCTAAATCAAATGGCAAGAATCACACAATTTCGCGT
TTATTGTCGCAAGGTGACACGTGGACGCACAAACCATTACACTTTCGATG
TCTCAACATCCAGTGGTTCAAATAACAAAATGTTTGACCATGTCTTAAAG
AATGATGAACCGCCACCACTCAACTTATGTGGAAAAATCAAATTTCTGCC
AGATGATGATTCGAAGATTCAAACTTTTGACTGCGCTGATTTAGTACCAA
TAATTGATTATGATGATAACAAAATTCGTTACCGCTTGTATGCCGGCCTA
AAAAAGGCTTCCGCTTCCACTGGAAGAAAAACGGCCGGTACAACCGTTCT
TAAATGTGATGAAAATGACAGTAATGATAAAATTGGACAATGGATGTTCT
TTATTCGATAAAATAAATGCAGTGAAAATACTACAATTTGTAACTTTGGG
ACTTGTTACCCTCACTTCGGAAATGATTCTTATACATGTTATTGCAAAGG
AAAATCGTATGGAAAAAATTGTGAAAGGACTAACTCTGCGGAAAACCCAC
ATGTCACATGTCAAGAAGTGAAACAATTAATGCCTGAAGCACCAAGTGGA
ATGTATTGGGTTGGCAGTGTTGGTGCAAAAAACCTATTATTTTGTGATAT
GATAACTGATGGAGTGATTGTGGAACTTCATGTAAAGCAAAAGAAGAATG
CGTTTCGTTTTTGTATTATCGAGTCCAACCACCAACCTGTACATTGCTCG
ATAGTCCAATCAATCGGCATAGCGTCAGAAGGAATATGAGTGTTGATTAC
TACGAAATACAGATGGCTAAATCGATATTTTTCTGTTTTCCTTTTTTCTT
GAGTTTAATATTCTTTGTCTATGGAGATAAAAGAGTAACACGAAATTCTA
CCAAAGTAATTGACCAAACAACTTATACAATTCGCGAGTATCGTTTCTCG
AAATATCCAAATGTTGAACCGACTTCATTTGCACAAGGGAGTAGCCTTCA
ACAGCTGACGTCTGTAACACCAAGGAGGTTGGTTAAGAGTGGGACAAATC
AATATTCGAAATAACGAAGAGGCTAATGCTTATAATTTCAATGCTATCGT
CAAACCTTTTACCAGTTCAATTCACAACCTGTCAACGTCCAATTATCTCT
TAAGCGGACGTCGATTTGAAGTTCTAAATCAAATGGCAAGAATCACACAA
TTTCGCGTTTATTGTCGCAAGGTGACACGTGGACGCACAAACCATTACAC
TTTCGATGTCTCAACATCCAGTGGTTCAAATAACAAAATGTTTGACCATG
TCTTAAAGAATGATGAACCGCCACCACTCAACTTATGTGGAAAAATCAAA
TTTCTGCCAGATGATGATTCGAAGATTCAAACTTTTGACTGCGCTGATTT
AGTACCAATAATTGATTATGATGATAACAAAATTCGTTACCGCTTGTATG
CCGGCCTAAAAAAGGCTTCCGCTTCCACTGGAAGAAAAACGGCCGGTACA
ACCGTTCTTAAATGTGATGAAAATGACAGTAATGATAAAATTGGACAATG
GATGTTCTTTATTCGATAAAATAAATGCAGTGAAAATACTACAATTTGTA
ACTTTGGGACTTGTTACCCTCACTTCGGAAATGATTCTTATACATGTTAT
TGCAAAGGAAAATCGTATGGAAAAAATTGTGAAAGGACTAACTCTGCGGA
AAACCCACATGTCACATGTCAAGAAGTGAAACAATTAATGCCTGAAGCAC
CAAGTGGAATGTATTGGGTTGGCAGTGTTGGTGCAAAAAACCTATTATTT
TGTGATATGATAACTGATGGAGTGATTGTGGAACTTCATGTAAAGCAAAA
GAAGAATGCGTTTCGTTTTTGTATTATCGAGTCCAACCACCAACCTGTAC
ATTGCTCGATAGTCCAATCAATCGGCATAGCGTCAGAAGGAATATGAGTG
TTGATTACTACGAAATACAGATGGCTAAATCGATATTTTTCTGTTTTCCT
TTTTTCTTGAGTTTAATATTCTTTGTCTATGGAGATAAAAGAGTAACACG
AAATTCTACCAAAGTAATTGACCAAACAACTTATACAATTCGCGAGTATC
GTTTCTCGAAATATCCAAATGTTGAACCGACTTCATTTGCACAAGGGAGT
AGCCTTCAACAGCTGACGTCTGTAACACCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025758XLOC_025758Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041858-exon-sc0003050-1575043694:11313..11784TCONS_00041858-exon-sc0003050-1575043694:11313..11784Clytia hemisphaericaexon
TCONS_00041858-exon-sc0003050-1575043694:8408..8555TCONS_00041858-exon-sc0003050-1575043694:8408..8555Clytia hemisphaericaexon
TCONS_00041858-exon-sc0003050-1575043694:7880..8132TCONS_00041858-exon-sc0003050-1575043694:7880..8132Clytia hemisphaericaexon
TCONS_00041858-exon-sc0003050-1575043694:5726..6605TCONS_00041858-exon-sc0003050-1575043694:5726..6605Clytia hemisphaericaexon
TCONS_00041858-exon-sc0003050-1510915933:11313..11784TCONS_00041858-exon-sc0003050-1510915933:11313..11784Clytia hemisphaericaexon
TCONS_00041858-exon-sc0003050-1510915933:8408..8555TCONS_00041858-exon-sc0003050-1510915933:8408..8555Clytia hemisphaericaexon
TCONS_00041858-exon-sc0003050-1510915933:7880..8132TCONS_00041858-exon-sc0003050-1510915933:7880..8132Clytia hemisphaericaexon
TCONS_00041858-exon-sc0003050-1510915933:5726..6605TCONS_00041858-exon-sc0003050-1510915933:5726..6605Clytia hemisphaericaexon
TCONS_00041858-exon-sc0003050-1491911889:11313..11784TCONS_00041858-exon-sc0003050-1491911889:11313..11784Clytia hemisphaericaexon
TCONS_00041858-exon-sc0003050-1491911889:8408..8555TCONS_00041858-exon-sc0003050-1491911889:8408..8555Clytia hemisphaericaexon
TCONS_00041858-exon-sc0003050-1491911889:7880..8132TCONS_00041858-exon-sc0003050-1491911889:7880..8132Clytia hemisphaericaexon
TCONS_00041858-exon-sc0003050-1491911889:5726..6605TCONS_00041858-exon-sc0003050-1491911889:5726..6605Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041858-proteinTCONS_00041858-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003050supercontigsc0003050:5726..11784 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.682221 0.525856 0.584335 0.472893 1.27044 1.04955 0.600306 0.816553 0.737649 0.731415 1.07472 0.942364 4.96347 4.48102 0.810914 0.560647 0.728777 1.22308 6.28504 7.30624 2.07976 2.08767 2.04815 2.78111 1.5758 2.51016 13.1583 7.69072 0.912749 1.16002
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003609Pan_app
IPR014716Fibrinogen_a/b/g_C_1
IPR013032EGF-like_CS
IPR000742EGF-like_dom
IPR002181Fibrinogen_a/b/g_C_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041858 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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