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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041790 ID=TCONS_00041790|Name=TCONS_00041790|organism=Clytia hemisphaerica|type=transcript|length=965bp
GGGGTGGCTGATTTTGCTAAAGTTTTGCACATTTAAGTCCCTTGGGTATA
AGTCCTTGGGGCATTCCTctcatttttaattgaatttaGATGGGAGGGAC
GACTCCATAGGTTCTGGCATACCTTGGTCAATACTATGAAGTAGTTAATA
TTTTTCATGCTTGCTCCTTGGAATCCTAGGAGTGTTTTGTTATTCCCCCT
AGAGGTTGATTGGTGCGAATTTTGCACACAAGTTCTTGAGTGTATCCCTG
GGTGTGCTTCATACTCTATTGGATTTTGGGGGTGGGGTTACTGGTTTTGT
CCTAAACTTACGAAAATGCGGGCAGGCTGGAGACCTCGAAATTGTCTGAA
TCCGCTTCAATTTCGAGCACATTGTGCTTTGGGTGAATTCACTGGGgcgt
ttccccatttttcaattttgcaatTTAGTTTCAGGGTCACCAATTAAAGG
CTGAGAACTAAGTCGAAATTTGGACATACTGGGGATCTCTGAAGTGTTTG
aaaggcaaaaatttgcaatcatggtccttgggtgaatccctgggttagtt
tttcttcattttcaatgtgaTATGATTCAAGGGTGTTATCACACCCCATA
ACGCCAATATATAACACCATTACTTAGTTTACTTAGTTTACAGGATACTT
TAGAGTGATTcgatttggctggaattttgcaTATTGCTCCTTGGGTAATT
CCTCAGTCCTAATTAGCATGCGGGTCTACAATTGGCCTCTGGGATGTGTG
AGGATGAGGTGTTGTAAGCACCTCCAAAACTGTCCATTGGGGGATAATTA
CCGTGCTCATAGTCAGTTTAGAGGCATATTACATTTTGTCGCTATCCTTT
TTATGCAAGAATCTTTCTAATTCATGAATAAACTTGATTTACcacaaaac
ttttcattttcgtcATGCTGTCCcacagctcaaaatttcaacttttcatg
CCGTCCCGCGGTTAN Run BLAST on NCBI transcript from alignment at sc0003021:10231..11195 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041790 ID=TCONS_00041790|Name=TCONS_00041790|organism=Clytia hemisphaerica|type=transcript|length=965bp|location=Sequence derived from alignment at sc0003021:10231..11195 (Clytia hemisphaerica)
NTAACCGCGGGACGGcatgaaaagttgaaattttgagctgtgGGACAGCA
TgacgaaaatgaaaagttttgtgGTAAATCAAGTTTATTCATGAATTAGA
AAGATTCTTGCATAAAAAGGATAGCGACAAAATGTAATATGCCTCTAAAC
TGACTATGAGCACGGTAATTATCCCCCAATGGACAGTTTTGGAGGTGCTT
ACAACACCTCATCCTCACACATCCCAGAGGCCAATTGTAGACCCGCATGC
TAATTAGGACTGAGGAATTACCCAAGGAGCAATAtgcaaaattccagcca
aatcgAATCACTCTAAAGTATCCTGTAAACTAAGTAAACTAAGTAATGGT
GTTATATATTGGCGTTATGGGGTGTGATAACACCCTTGAATCATAtcaca
ttgaaaatgaagaaaaactaacccagggattcacccaaggaccatgattg
caaatttttgcctttCAAACACTTCAGAGATCCCCAGTATGTCCAAATTT
CGACTTAGTTCTCAGCCTTTAATTGGTGACCCTGAAACTAAattgcaaaa
ttgaaaaatggggaaacgcCCCAGTGAATTCACCCAAAGCACAATGTGCT
CGAAATTGAAGCGGATTCAGACAATTTCGAGGTCTCCAGCCTGCCCGCAT
TTTCGTAAGTTTAGGACAAAACCAGTAACCCCACCCCCAAAATCCAATAG
AGTATGAAGCACACCCAGGGATACACTCAAGAACTTGTGTGCAAAATTCG
CACCAATCAACCTCTAGGGGGAATAACAAAACACTCCTAGGATTCCAAGG
AGCAAGCATGAAAAATATTAACTACTTCATAGTATTGACCAAGGTATGCC
AGAACCTATGGAGTCGTCCCTCCCATCtaaattcaattaaaaatgagAGG
AATGCCCCAAGGACTTATACCCAAGGGACTTAAATGTGCAAAACTTTAGC
AAAATCAGCCACCCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041790-exon-sc0003021-1491911889:10231..11195 | TCONS_00041790-exon-sc0003021-1491911889:10231..11195 | Clytia hemisphaerica | exon |
| TCONS_00041790-exon-sc0003021-1510915933:10231..11195 | TCONS_00041790-exon-sc0003021-1510915933:10231..11195 | Clytia hemisphaerica | exon |
| TCONS_00041790-exon-sc0003021-1575043694:10231..11195 | TCONS_00041790-exon-sc0003021-1575043694:10231..11195 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003021 | supercontig | sc0003021:10231..11195 . |
Blast
The following BLAST results are available for this feature:
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