TCONS_00041713 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041713
Unique NameTCONS_00041713
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length157

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041713 ID=TCONS_00041713|Name=TCONS_00041713|organism=Clytia hemisphaerica|type=transcript|length=157bp
AGATGCTCTAACACtcgaaatatataaaaataatagaaaCGTCCAAGATC
AATCAATTGTAGCGTTAATATGTTATGGAACTGATTTGTAGAAGACAGTG
GCTCCTTGTGTCATGTTATGCTCTATGCTGTTTGGTAACCTTCACAAGAA
AAAATTC
Run BLAST on NCBI

transcript from alignment at sc0002982:1144..1300

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041713 ID=TCONS_00041713|Name=TCONS_00041713|organism=Clytia hemisphaerica|type=transcript|length=157bp|location=Sequence derived from alignment at sc0002982:1144..1300 (Clytia hemisphaerica)
GAATTTTTTCTTGTGAAGGTTACCAAACAGCATAGAGCATAACATGACAC
AAGGAGCCACTGTCTTCTACAAATCAGTTCCATAACATATTAACGCTACA
ATTGATTGATCTTGGACGtttctattatttttatatatttcgaGTGTTAG
AGCATCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025633XLOC_025633Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041713-exon-sc0002982-1491911889:1144..1300TCONS_00041713-exon-sc0002982-1491911889:1144..1300Clytia hemisphaericaexon
TCONS_00041713-exon-sc0002982-1510915933:1144..1300TCONS_00041713-exon-sc0002982-1510915933:1144..1300Clytia hemisphaericaexon
TCONS_00041713-exon-sc0002982-1575043694:1144..1300TCONS_00041713-exon-sc0002982-1575043694:1144..1300Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002982supercontigsc0002982:1144..1300 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041713 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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