TCONS_00041537 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041537
Unique NameTCONS_00041537
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length268

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041537 ID=TCONS_00041537|Name=TCONS_00041537|organism=Clytia hemisphaerica|type=transcript|length=268bp
AATCGAATTTAAGTAGCTAACCATGAAAGACTGATTTGAACAACCTTGAA
AGGAATTTTagtgtattttgaaaaatttggggaTTATTTTTGAATACTTG
TGAGCGTTCTGTGAGGGCGGAATCGATCCAAGTTGATCAAAATTATGATC
TAGGCTTCTAAGTGTGTTAAAATGGAATTAAAAACTGATATAATCGAATT
TGACTAGCTAACCATAAAAGAGTGATTTGAATAACATTGAAAGgaatttt
agtgtcttttgaaaaatt
Run BLAST on NCBI

transcript from alignment at sc0002903:8262..8720+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041537 ID=TCONS_00041537|Name=TCONS_00041537|organism=Clytia hemisphaerica|type=transcript|length=459bp|location=Sequence derived from alignment at sc0002903:8262..8720+ (Clytia hemisphaerica)
AATCGAATTTAAGTAGCTAACCATGAAAGACTGATTTGAACAACCTTGAA
AGGAATTTTagtgtattttgaaaaatttggggaTTATTTTTGAATACTTG
TGAGCGTTCTGTGAGGGCGGAATCGATCCAAGTTGATCAAAATTATGATC
TAGGCTTCTAAGGGTGTTAAATGGaataaaaaattgatatgatCGAATTT
GAATAGCTAACCATGAAAGACTGATTTGAATAACATCGAAAGGAATTTTA
ATgtcttttgtaaattttggtgattatttttgaatactTGTTGAGCGTTC
TGTGAGGGCGGAATCGATCCAAGTTGATCAAAATAATGATCTAGGCTTCT
AAGTGTGTTAAAATGGAATTAAAAACTGATATAATCGAATTTGACTAGCT
AACCATAAAAGAGTGATTTGAATAACATTGAAAGgaattttagtgtcttt
tgaaaaatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025484XLOC_025484Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041537-exon-sc0002903-1491911889:8262..8414TCONS_00041537-exon-sc0002903-1491911889:8262..8414Clytia hemisphaericaexon
TCONS_00041537-exon-sc0002903-1510915933:8262..8414TCONS_00041537-exon-sc0002903-1510915933:8262..8414Clytia hemisphaericaexon
TCONS_00041537-exon-sc0002903-1575043694:8262..8414TCONS_00041537-exon-sc0002903-1575043694:8262..8414Clytia hemisphaericaexon
TCONS_00041537-exon-sc0002903-1491911889:8606..8720TCONS_00041537-exon-sc0002903-1491911889:8606..8720Clytia hemisphaericaexon
TCONS_00041537-exon-sc0002903-1510915933:8606..8720TCONS_00041537-exon-sc0002903-1510915933:8606..8720Clytia hemisphaericaexon
TCONS_00041537-exon-sc0002903-1575043694:8606..8720TCONS_00041537-exon-sc0002903-1575043694:8606..8720Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002903supercontigsc0002903:8262..8720 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041537 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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