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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041400 ID=TCONS_00041400|Name=TCONS_00041400|organism=Clytia hemisphaerica|type=transcript|length=851bp
ACGTCTCCTTTTTGGAGGAAACTTTTCTGCTCCAGGCAACTCTTGGTTTC
CAATCGCAAATTGTGGTGGTTTTGTATAACGTGCAGTAATGAATGTTAAA
GTGAGTGATGTTCGGCGAATACTTAAAGACTTCTATTTCTTTCGTTATAA
GCTCTGATTTTTTTGTCATCGAATGAGTACATGTAGGTATTTTTGGGAAT
TCGTATATTCCTAGTGGAGTAGTGGTGGTGCAATCGTAGAGATTTCCCAG
TCTTGATCCAAATATTATTGGCCTGAACATAAGGACCAGAAATAGTGACC
ATTTCAGCGAAGTGGGCTGGCTTCTTCTGTATGAGATGGTGTTAATCGAT
AGATTGGGGTCTAGGAATCTCTTGACCAACTCCGCGTTTAAGTTCTCTTC
AGGTTCCCAGGTGTTTTCGTCGTGAGAATATCCTTGCCATTTTATTAAGA
AGTATCTTTTGTTTCTCTTGAGcttcattttcaagatttccTCCACCATG
TAGATCGGTTCATCTGCTTCCATTTCTTGAGAAGTTTCAAAAGTTTGGTC
TGGATCAGGTTGGGTTTTATCTTCTACAACAGTGTCATTAATCTCTTTTG
GTCTAGTCTGctcttgattttgatttccagGTGTGAATGAGTCTGTCTCT
TCGTGCTCTGATTCTTCATTCTCTTCAGATACGTCACTCAAGTCATCAGA
GGAATCATCGTTATTAACACGAAAGTTTGGATCTTTAAATGGCTTCATTC
GGTTGACGTGGACCACAGTCGTTGGTTTTCTTTTATTGAGGGGATCATTC
AGCTCATAATTTACTTCGGATATCTTTTTCGTGACTCGATATGGACCAAT
C Run BLAST on NCBI transcript from alignment at sc0002845:1..999+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041400 ID=TCONS_00041400|Name=TCONS_00041400|organism=Clytia hemisphaerica|type=transcript|length=999bp|location=Sequence derived from alignment at sc0002845:1..999+ (Clytia hemisphaerica)
ACGTCTCCTTTTTGGAGGAAACTTTTCTGCTCCAGGCAACTCTTGGTTTC
CAATCGCAAATTGTGGTGGTTTTGTATAACGTGCAGTAATGAATGTTAAA
GTGAGTGATGTTCGGCGAATACTTAAAGACTTCTATTTCTTTCGTTATAA
GCTCTGATTTTTTTGTCATCGAATGAGTACATGTAGGTATTTTTGGGAAT
TCGTATATTCCTAGTGGAGTAGTGGTGGTGCAATCGTAGAGATTTCCCAG
TCTTGATCCAAATATTATTGGCCTGAACATAAGGACCAGAAATAGTGACC
ATTTCAGCGAAGTGGGCTGGCTTCTTCTGTATGAGATGGTGTTAATCGAT
AGATTGGGGTCTAGGAATCTCTTGACCAACTCCGCGTTTAAGTTCTCTTC
AGGTTCTCAGGTGTTTTCGTCGTGAGAATATCCTTGCCATTTTATTAAGA
AGTATCTTTTGTTTCTCTTGAGCTTCATTTTCAAGATATCCTCCACCACG
TAGATCGGTTCATCTGCTTCCATTTCTTGAGAAGTTTCAAAAGNCTTCAG
GTTCCCAGGTGTTTTCGTCGTGAGAATATCCTTGCCATTTTATTAAGAAG
TATCTTTTGTTTCTCTTGAGcttcattttcaagatttccTCCACCATGTA
GATCGGTTCATCTGCTTCCATTTCTTGAGAAGTTTCAAAAGTTTGGTCTG
GATCAGGTTGGGTTTTATCTTCTACAACAGTGTCATTAATCTCTTTTGGT
CTAGTCTGctcttgattttgatttccagGTGTGAATGAGTCTGTCTCTTC
GTGCTCTGATTCTTCATTCTCTTCAGATACGTCACTCAAGTCATCAGAGG
AATCATCGTTATTAACACGAAAGTTTGGATCTTTAAATGGCTTCATTCGG
TTGACGTGGACCACAGTCGTTGGTTTTCTTTTATTGAGGGGATCATTCAG
CTCATAATTTACTTCGGATATCTTTTTCGTGACTCGATATGGACCAATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041400-exon-sc0002845-1491911889:1..402 | TCONS_00041400-exon-sc0002845-1491911889:1..402 | Clytia hemisphaerica | exon |
| TCONS_00041400-exon-sc0002845-1510915933:1..402 | TCONS_00041400-exon-sc0002845-1510915933:1..402 | Clytia hemisphaerica | exon |
| TCONS_00041400-exon-sc0002845-1575043694:1..402 | TCONS_00041400-exon-sc0002845-1575043694:1..402 | Clytia hemisphaerica | exon |
| TCONS_00041400-exon-sc0002845-1491911889:551..999 | TCONS_00041400-exon-sc0002845-1491911889:551..999 | Clytia hemisphaerica | exon |
| TCONS_00041400-exon-sc0002845-1510915933:551..999 | TCONS_00041400-exon-sc0002845-1510915933:551..999 | Clytia hemisphaerica | exon |
| TCONS_00041400-exon-sc0002845-1575043694:551..999 | TCONS_00041400-exon-sc0002845-1575043694:551..999 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002845 | supercontig | sc0002845:1..999 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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