TCONS_00041390 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041390
Unique NameTCONS_00041390
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1058

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041390 ID=TCONS_00041390|Name=TCONS_00041390|organism=Clytia hemisphaerica|type=transcript|length=1058bp
gcacgtcgtccgacagggggtaaaaaaaattttctggaatggcccagtAC
CGTCactggtcctaaatccgacagccctgcctaaatccgatggggtcttt
caaagatacaaactaaaataaaaacaaacctttcgctgtgacgcaacaaa
GATACCGAAGTGTGAACTAAACTGCAAAATTTGATacacactgaaccaat
tgaaccaaataacaataattgcttctatacaaaacataattttttattac
aaaattgtccgAATAGTTAACATTAAACATgagcaacggattcagaatac
AGAGttgagGTAGACGTCCATTCAGCATTTAGCTTGTTATCCTATAGATT
AGACATTATATTATTAAAGCCAAAGATGGAAGTAAGCTTTCTTGGAAAGG
AACTCAAGCTTGACAACGAAGAAGATGGTGAAGAAATTGCAAACGCTATC
AAAAATTGTAGAGACATGGAAACTCTAAAACTTCAAGGGAACACGCTTGG
AGTTGGTGCTAGTAAGGTTATATCAGAAGCCTTGAAACAGCAGAGTGCAT
TCAAGAAAGCATTATGGAGTGATATGTATACTGGAAGGCTTCGTTCTGAA
ATTCCCAAGTCTTTGGAATTGCTTAGTGAGGGCATTATAACAGCTGGTGC
TAAACTGACAGTCTTGGATTTGAGTGACAATGCATTTGGTCCAGATGGAG
TGGACGGAATCAAGAAGCTTTTACGCAGCGAATCATCTTATTTATTACAC
ACTTTAAAACTGAATAACAATGGTTTGGGAATTGGGGGTGGAAAGGTAAA
AAAACTAATCCATCAAATTTTTGTATGACATAACCTAATTTTTACAACCC
AACTTTTACGactttcttttatcattttattatcTGGCatccgatgtaga
aattttcttccgacacgctaaagctctaaaggtcgggaaaattttcaaca
tctggaagaaatacattacgNtaccatcggagagaaatagtagtCATCCA
TTGATGTGCCGACATAAGTTTAGCCCTCATTTTCGGGGCCGTGCTGAACG
CTCAAAAA
Run BLAST on NCBI

transcript from alignment at sc0002843:129..12021+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041390 ID=TCONS_00041390|Name=TCONS_00041390|organism=Clytia hemisphaerica|type=transcript|length=11893bp|location=Sequence derived from alignment at sc0002843:129..12021+ (Clytia hemisphaerica)
gcacgtcgtccgacagggggtaaaaaaaattttctggaatggcccagtAC
CGTCactggtcctaaatccgacagccctgcctaaatccgatggggtcttt
caaagatacaaactaaaataaaaacaaacctttcgctgtgacgcaacaaa
GATACCGAAGTGTGAACTAAACTGCAAAATTTGATacacactgaaccaat
tgaaccaaataacaataattgcttctatacaaaacataattttttattac
aaaattgtccgAATAGTTAACATTAAACATgagcaacggattcagaatac
AGAGttgaggtaattatttttaactcacacgtttttgtttttttgatcac
attagttgacatcttgacattatagtctaTTGTTAGATGTtctgtttcga
gagttcttgcaatagacctttttttaaagaggcagccatgttgaataatt
atgtactccagcataaaaacaatgatacagccatgcataattactgtatc
atgcatNaaaacaatgatacagccatgcataattactgtatcatgcatat
tttaaaaattatgctgttttagagctttaatGATAACATGAAAGTCAGAA
TATGATCCTTCAATTTGAATCAAAACTATAaggtgcacttacaaacatca
atcaGCTTGGTAAAATCTGTGTGCttccatttcaagaaattttgcgCAAT
TCATCAATGACGCAAGAagatcaacaaaagaaaccaataaaagatcaaag
agaaaagCTGTAACTAGACGGTGTCAATCGTACAACTTCACATTTTGGTA
TTCTCAGTACCAAGCCATTATGTTAAGCTTTGTGTCAATATTCTCAGCCT
TTAAATCTCAACTTTACTACTTATCCTCGGTTTGATATGAGCTTTTTCTT
TAggaattttatattataaattatttttggataaagaaccaaacatttta
ttttaactcattttcatttatatttttttgttaaatgtttttatatgtag
GGAGAACGAACATGTATGTTTTGTTACTACTtgaatatatagatagatag
atagattcaAACGAAAATCGTAATTGAACCAATCTAACGTAATCGAACga
gataaaaaaatattgaataattgcgattcgactgtcgaacgcaattgaat
agCAATCGGCCAATTCTTGGGTAATATTCTATtgtattcgattgcgttcg
agtaacaTTTGATTTGTTCGATTGATTATAAATTACCTTTGATTGATctt
cgattatgtttgattacgattatgtttgattacgattatgtttgaTAAGT
TTAATTGCGATTAGATTAAATTTGATCACTCTTTTAGAGTCTTTTTAGCG
CGGACAAGAGTCAACCCCCCTGACATTTGTCTGTGGGGGAGGTGGTTACA
TCCTAAAAATTGCAAATGAAAATAGGGAGCTAAAATACAgccaaatattt
ggggggacctgaTATGTTTTTTGGGGGGCTGGAATTTCAATGGCAAGGCT
GGGGCTGACTATTTCtgctattatttttctttatatcaccacatttttat
aaaaacctttcattttacagattgattctgtttgttttcacttttctACC
ATCTTGAATTAACCATTATAGTCAATAGAATAGAAAtgtgattttcctaa
aaatgatattataaatcaacaaatattttatactAGGTATAGGACTGGGA
TGCTTAAAATAACTTTTCAAATGTTTGGGGGACCtatttttttgcctggg
acctagacCTGGGCTGACCTTATGTCACAAAAATAGATATGTCTAGAAAA
CTGCATCTGACAAAAGTAATTAACCATTCACAGTGCATCACAAAGAACAC
AAAGAGCGATAttccagggatatgttatagcgtagctggataacgcacat
ttaaaaaagccttgttctatctctgtccccgacattaaaatttgatatga
aatttatcttatttaattacaaactcgtgaaatctggatttcctcttagc
caatgattctgctgctgcatttatcgttcacgattaaaaacttttaatta
tcaagagggtaaTTAATTTACCaatgtaaaacattggtgaatgacaattt
aaaaaaatgaaaaacattgttttcattagtaaagttataagaagtttctt
ctctaagattataattagtaataccgcgctacaccacggggtgcctcact
ttctaactgatattttcagatagcaagtcggtatatctgattatggaaaa
aatttcaagtcaattgaaacaaNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NGAAAGCAAAAACAAGATGGCCGCCAAAGAACAAGAACAAAAAATGAAAC
CTACCAGGTAGCCAATATAAAAATACTGTGAATGAATTGACTCTGATGAG
TGACTTGAGGTTGAAGTTGATTATTGACACAAAATTGATTTACTTTTAAA
GTTAGAGCCTTATGAGTTATGATGCCATTATGGTCAGTCAGCATGACATG
ACAAAAAATGGTAGCTCTGAGATGTGACTGAAGTGAGGCCTTAAATAGAC
TGAGTTCACACTGTGACATGATACTGAAAATGAGGCCATGGAAACCAGGT
GTGCCTAACATACTatggcgaatagaatatctcacAAATTactatatgca
taaaactgacaaattcctttctttcttattcttcggtgacgtcaccatca
atcctgacttgacagtaagaacaatggagaaccaaatttgacaatgcata
attattaagAACGACCAAGAAAGTTTGTTTGATGCTTTGTGAAGATTCAC
TCGTTCACCAGCTCTTGCGGTGAGCCGTCACAGGTATACAGGGCTTCAAA
ACTGCACGTTTTATACTTTCACAAAACGCATCTTTTTACAATCTTTTATC
TCTGATGGGGTCTAATTAAATCTGCTTGGCCTACCTGCACAACAATAGGG
TAACTAGTTACTATTTCCGTCATCATATAGGAGTATATTTTCGTAAATGG
ctgaaatcctgtgtaggttgaAAACTGAAGAACATATCATGTGTTTCGTG
AAAATACCTATTTATACTCATATTGAGTCGCTACTTCTTTCTATCTTGAC
TCATTATTGAGTTACCATTCTTCCAGAGGTTGTTTTAGATCTTTAGTTTA
TTTAACTTTGATAAATATTGATTTCATCGTATTTTTTCCATTTCTTAACA
AACCTGATAGCTTTCTTGTGGATATTCATTCTAGATATTTGCTATGATTT
GTCTTGTCCTTCTGTTTCGTGGGTTTTGTTCTCCATGTTTCTATTTGAAT
AGTTAAAGGTTTCATACTTCTAGACTAAATATAATCCTATTATTCCTATG
ATCATTCTGAAGTAGGGTGTCGGAATTAGCAGAGGGATGTCGACATTTAA
CCTACTTACATTAATGTCAAAACGCCCATAATGATCATCCAACAGAAGGC
AAGTTAGTTGCAAGTTCTTTTTATTGAAATTTAGCCTTCTTTTATTTAGA
CAGTGGTTAATTAATTATCATTTTTAATGACTGAAACGAAAATATTGATA
TATCATGTAATAATTATGCATTGCTTCTGTTTAATTTGATAGGTAGATTT
TTATCTTTTTCAAGCACTTTCGGAAAGCAACTTTTTTATTCCATTGAGCA
TATCTTTTGATCTAATGAATCGAATTTAATAGATGACCCATCAAAATTTA
AGTTTATCTTTCTTCTTTCCAATGAAATAAGAATGGTTCTTTTAAGATTT
TCCTTGTGTAACTAACCCATACTTAAAAACAAATATTAAGCACCTTGAAG
TAGAGAGTCACAGCTGTATTCCTTAAGAACATACCAGGCTATTTCTTTAC
ATTTGTGGTTGGGTTCCAGGACTTAAGGAATATGGAGGATTTCAAAAATT
GAGGTTTTTGGTCGGAAAGTGAAAAAAAGGTTCCAAATTTAGCTACCAAC
CGACCAACCGACCAACCAACCCATTTTTTAAAGCTTCTTCTTCTTCTTGG
TTCCTACCAAGCAATCAATTAGGCCTGGCCTAGGCTAGAGGGAGAAATAC
TTCTTTAATAGACCGATTCAACATAATCCAGTTAAATACAATCTTCAAGC
AAACCTCAAGTAAGCAAGCAAGCTGTCTTTTCTTAACTGAGCTTTtgtga
gcataaactttcgtaAATGTCCCTCTCAAGACTTTCCGACAAAGGTATTT
AATTTGGGAAATGAATATTTCTCAcgattggcttggtatttttttttgat
ttttgcacaagtaaaaggaaaaaatctggagcccaattttcaaataaata
atCTTTTGGGctaaaagtgcctaaaaatttgtaaaaatgggaTTATTTgg
agttttttcagattttttttcataatgacAGGAGGCAATGTTCTTTCAAA
AATGGCTGAAGCCgttttttccagaaaattttttttggctgtagaaatca
gattttcttatttggggaaattcccttttgtcatttttagggaaaatgag
catttctcgcaAATGCCTTGATTATTATTTTCTCATGTTTTAGTTTGCAT
TTTCTTACTAATGCTGCCATTTTTTCTATTCTCTTATTACATTTACCTTC
CAGGTAGACGTCCATTCAGCATTTAGCTTGTTATCCTATAGATTAGACAT
TATATTATTAAAGCCAAAGATGGAAGTAAGCTTTCTTGGAAAGGAACTCA
AGCTTGACAACGAAGAAGATGGTAAGTTTATTGTTTATGTTATGTTTTCC
AGAATTATTTTCAAGCAGGGAAATTTGttactttgtaaaaaaaataagga
TTGGAATTATAGCTTCACTGATGTCAGGTTTaggcaaaaaaatgtatttt
gaaataaaaaaatgcaacttATGGATATCTAGTAAATCTACCCAGAAATT
CAAGTCAGTAAAGGACCTCTCAAAGAGGTTGCAATTAGACGGGCAGGCTA
CCAACCTGCAGACCTGATTTGGCCGACTTATTATTCTGGATTATCTTTGC
GCATTGGGTTTACACTTAGTAAACATTAAAATTTACTAAACATTCGTGAC
TTCTCAAGCGGTTTAAAGTACCTGAAAATCAGACCGGTCTTGGTCCGGTA
TTACGATTGGTCTAGTAGTGGTCAAACTTTTTGTTTTGTACGGCCTTCAG
ACCTTCTCAAAATATGATCTCTAACAGTCCTGGCCGCTTCTAGACGCTCA
TGGCTGCTTGTTAGACCAGTCCTGACCGCTCGTTAGACCGGTCCGCTCGT
TAGACCAGTCCAGGCCGCTCGTTAGACCGGTCCAGGCCGCTAGTTAGTGA
TTTTTAGGAACGattacatcaaaaaattcatGTAAAAGGATGTCGACCAG
ACGATCAGGGCCAGTCTGGGACCGGACGCTTCGCAGCGGCAGCTAAATTA
ACTAGACTCGTAGTGgccttttggtaaatttttaccGTTCATTTACCGGC
CCTAAAAAGACCGTCTAAAGACCGGTcccattttcaggtactttaaatcg
cttggggGGGGGGTCACATTTGTTAATAAGTgattatcaaaaaataaaaa
aataaattttatgctGGCGCAATCTTGAGGCCATGCAGTGTATTGCAGAT
TTTATTTAAATACACATTCTagaaaaactttgtttttatatcTAGTTGTT
AGTAATAAGTATAATTATCTTTTGGGTAAATTAGAATTGTGAAAATGTGT
TAATTGTTGGAAATTGGTCGGTATTAATTTTGTTTCTAATTGTGTGAATT
TTTAAGTCAGATTTTCTAAACTGAATTCGTGTTCGTGTCTACATTTCGAA
ATTATTTCTGACCTCTTGTTTAATTAATCCCCTtagtttttgtaaaatat
aatttCGAACTTTTCCTGTAACCAAAGTAGACATCGCTTTGTGATGTTGC
TGTGGGCAAGTACCCTTTTCTAAGTAAACcattttttctttggaattcca
gatataatgttgaaattgttgtcttgtttttgtattttttctaaGCCAAT
GTAAACTTTGTCAGGTACAGAGGGGATGCATTTGCAAATAATGCTTTTTT
CTCTGTATTTTTCTTCTAAAagacaattttgtttttgtctgAAACAGACA
AACATGACGTTTTTAATTCAAAACCTGAAATAGAGCTTCTTTTATCTAGG
AGCTGTGTaggcattttttgaaaagtcaaTATCGCTGAATAATATAAAAG
CCCCACAGCCACACCAAATGCTAATATTACTATATACTAGCCTATAACGA
TAAGAAGAATATGAATGTTAACATTTTTACGACAGGGAACTAAACACTGC
CAATCAAAGTGTTGTGAGCTccatgttttattttcaaatagtGCTAAGGT
TTCTTTATTAGATATTGGTATTTTTTGGGTTTTGCGATGTAATTTGCGAT
TAAGCGGGATCAAATTTACATATACTTACCTTACATAAATGGTTTAGTAG
AATAAAATACAACataaaatgtttagaaaaattTAAGTGCTTACTGAGAG
AGTGGCAAACAAAAGGGGAAGCTTTTAATAGACAAAaaagattttagttt
tttttatttactagaAAGAGATTGGACTTTTTGAtaatagtgaggtctgt
tagcacatacaaacgtaagaatactacagatggtgataaaagcatgaaat
ttggcacagatgatccctTGATTTTAAACAACACCAAAGTAACACCAATT
TTGCCACATgaccacctgccagatgacgttatcaggtggctgggcaaaga
attatttttttgaaaatattcaaaatctgatggttccagcggaaagagca
tgaaaatgCTGATGAAAACTGAGGTATAAagcatgccttgaaaatcttct
tatcaaaagttatggaggttgaaagtttNACTGAGGTATAAagcatgcct
tgaaaatcttcttatcaaaagttatggaggttgaaagttttgtgatgcAG
CCTACTTTTTTCAAGAAAGAAGGAAAGGATAAAAGAGGAAACAAAGAGTT
TTATTAAAATTCCTTGCTTTTTCTCTCTGCCTTTCAATTCTTTTaacttt
gcttaaaaaattccCTCcacatttttaatttcaaaatacatttttcatCG
CCAAAACCTGAATTTGCTTCCCAGTACAAAGCTATAATTCAAACCCTGGA
ATTATTCCAATCGATGGTTAGGAATCAAGTATGGTGATAGAGGTTATTTT
GCATCAAGGGAGACCAGGGGTGTGCCAATCATTTTATAACCAGATTTGAT
ATATCtcaatttgaaaagatttttttaatgataGTCGTGAAAGATATCAA
TGTCTGTAAAAGTAGGAGGTGAATTTGTAAGTTTAAAAGCcagttttaaa
tgttttctgcAATTACTAAGATATCTTTGCCAGCAGGGATCAGAAAAGGC
CAATTAACAGGAACATTCATTTGCTTAATCATTATATGTATTCACTTTTT
CCTCTCTTTATATGAAGAGTAGGCTAAATAAGAGGTAACTTAGCGGTTAA
CCATCTCTAATTTAGGGCCCATAGTAAACGCCTATTCACCTTCAGTCATT
TGCAAGGGCCACTGTACCTTTAGATTAAAAAACTTGAATCTATTTTACTT
CTGTGCTTTTAATGCAATGCGCAAGACTCAAAATAACTCTATTTCATTAT
GGTTTTAAAGGTGAAGAAATTGCAAACGCTATCAAAAATTGTAGAGACAT
GGAAACTCTAAAACTTCAAGGGAACACGCTTGGAGTTGGTGCTAGTAAGG
TTATATCAGAAGCCTTGAAACAGCAGAGTGCATTCAAGGTGAGTgagtaa
tttttttgtaaatttgttgtAAATTTTTAGTGATAGAATCCAGTACTACA
CTGTCAGTAACCTAAAAAATCAACTAATTCAGCTTCCTTTGTTGAAATAT
AAAGTATATTCAAGCGCAGACAATTCACTTTCCCATCGAATTCAGGCTCG
ACTTTATATCTCAtgcaatttgaagaaaaaaagttaaaaagccAACTTTA
TTAAAATTCATCTTGTAAACCTTTAATTTCATGCTCGCCTGAATGCTTAT
GTTGtgcttttatcaaaaatggTAAATCTGTACATGGGGCGCCAAAAGGG
tttttaataccaacttttttttagatACCAACATTTTTAACGcaaaaatc
attttataatatTACTAAAGTTgttcaataatttcttttacCATTCAAGT
GTAAAGGGGCCCTTAAAATATTTCTGCGGAAGAAATGGGAAGACAGTTAT
CAGGAAGTAGGCCTGGAATTTCGAATTATGAGACTTTGATTCATACTTTT
CAGTTAGGAATTTTNCTGCGGAAGAAATGGGAAGACAGTTATCAGGAAGT
AGGCCTGGAATTTCGAATTATGAGACTTTGATTCATACTTTTCAGTTAGG
AATTTTAGGATTACGAGGATTGTGACATCATAAATATAGAAAATATGTCA
TTTCCTATCACAAATtcgattttgaaaataaaagatttccagattttttc
tttaaaaaaagtttcccAGTTACGTAACTCTGATTTCTattccaaatttt
tcaaaaggtttttgAGTTACGTTACGTTAGTTATAGTAAGCTGATTGAAC
AGGCGATTGCATGAGTGTTttagaggttttgtttttaaagaatgatatcg
tttgcttactcatcaattttaattcacaagctttttcacattggattgac
acggatgtggagcaagattgatcagaacgagaaaaagaaaaacatttttt
tgcttattatcAGCATATTATAACattagcaagacactgtcctgatatga
aatatNCTTTTTTGCTTATTATCAGCAtattataacaatagcaagacact
gtcctgatatgaaatatgtgtctgatatgaaacggaaacacttatgtaaa
aagaaaacctttaagattATGTCTACATTGCACTGGTATTGGAAAAAAGA
AGTTGGTGTcggaaaaaaaaagttgatatcgAAAAAAAGTTTGGCGCGCC
ATAAATTTGAGCCTGTTTAAAATTACAGTACCGTAGCAACNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TTaaacaaaccccccccccccccccgccaatatgaaaatgcttcctacgg
cactgaattAGAAGATAAGGAGGGGAAAAGACAAAccttttcctttattt
tttaattaaagtaAAGGGTGTCTGGTTAATTAAAAAACTTTAACTTTTTT
AGAAAGCATTATGGAGTGATATGTATACTGGAAGGCTTCGTTCTGAAATT
CCCAAGTCTTTGGTGAGTATCACctaggtttttttattttaatagaagTT
GCTCACTCTGTCAAGATCAAAAGGCTACAATATGCTTCTTAAATCTTTAA
ATCTATACCTGATATGGCTGTCTGTAtgtctgggggtgttttttgatttt
tgaagcctggGCATagtttttctccaaaatgaGGCTAAGACTTTGGGGCA
AGCCTGAAACTTggttgttccttgggtgaatatctgggagtgttttttca
tttttcaaatgattTCATTTTGCAGAGCCTGGGCACTAATCTTTTGGTTT
ATTTTGCTACAGTTGGACCAATGAATAATTTGGAGCTACTGAAGTTTAGC
CCATTATGTTGCGCAGGTTCGATCTCGATATGTAAATTACAGAAAAGATT
TAACACATTTGCAGAATACTGTAATTGGGTTTTCCCTTTGCTCACAGTTG
CTCAcaaattttaattgaaattaCCAGTCAAGTTATATTTTCAACAATAG
GAATTGCTTAGTGAGGGCATTATAACAGCTGGTGCTAAACTGACAGTCTT
GGATTTGAGTGACAATGCATTTGGTCCAGATGGAGTGGACGGAATCAAGA
AGCTTTTACGCAGCGAATCATCTTATTTATTACACACTTTAAAACTGAAT
AACAATGGTTTGGGAATTGGGGGTGGAAAGGTAAAAAAACTAATCCATCA
AATTTTTGTATGACATAACCTAATTTTTACAACCCAACTTTTACGacttt
cttttatcattttattatcTGGCatccgatgtagaaattttcttccgaca
cgctaaagctctaaaggtcgggaaaattttcaacatctggaagaaataca
ttacgNtaccatcggagagaaatagtagtCATCCATTGATGTGCCGACAT
AAGTTTAGCCCTCATTTTCGGGGCCGTGCTGAACGCTCAAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025367XLOC_025367Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041390-exon-sc0002843-1491911889:129..437TCONS_00041390-exon-sc0002843-1491911889:129..437Clytia hemisphaericaexon
TCONS_00041390-exon-sc0002843-1510915933:129..437TCONS_00041390-exon-sc0002843-1510915933:129..437Clytia hemisphaericaexon
TCONS_00041390-exon-sc0002843-1575043694:129..437TCONS_00041390-exon-sc0002843-1575043694:129..437Clytia hemisphaericaexon
TCONS_00041390-exon-sc0002843-1491911889:6282..6399TCONS_00041390-exon-sc0002843-1491911889:6282..6399Clytia hemisphaericaexon
TCONS_00041390-exon-sc0002843-1510915933:6282..6399TCONS_00041390-exon-sc0002843-1510915933:6282..6399Clytia hemisphaericaexon
TCONS_00041390-exon-sc0002843-1575043694:6282..6399TCONS_00041390-exon-sc0002843-1575043694:6282..6399Clytia hemisphaericaexon
TCONS_00041390-exon-sc0002843-1491911889:9339..9466TCONS_00041390-exon-sc0002843-1491911889:9339..9466Clytia hemisphaericaexon
TCONS_00041390-exon-sc0002843-1510915933:9339..9466TCONS_00041390-exon-sc0002843-1510915933:9339..9466Clytia hemisphaericaexon
TCONS_00041390-exon-sc0002843-1575043694:9339..9466TCONS_00041390-exon-sc0002843-1575043694:9339..9466Clytia hemisphaericaexon
TCONS_00041390-exon-sc0002843-1491911889:11031..11090TCONS_00041390-exon-sc0002843-1491911889:11031..11090Clytia hemisphaericaexon
TCONS_00041390-exon-sc0002843-1510915933:11031..11090TCONS_00041390-exon-sc0002843-1510915933:11031..11090Clytia hemisphaericaexon
TCONS_00041390-exon-sc0002843-1575043694:11031..11090TCONS_00041390-exon-sc0002843-1575043694:11031..11090Clytia hemisphaericaexon
TCONS_00041390-exon-sc0002843-1491911889:11579..12021TCONS_00041390-exon-sc0002843-1491911889:11579..12021Clytia hemisphaericaexon
TCONS_00041390-exon-sc0002843-1510915933:11579..12021TCONS_00041390-exon-sc0002843-1510915933:11579..12021Clytia hemisphaericaexon
TCONS_00041390-exon-sc0002843-1575043694:11579..12021TCONS_00041390-exon-sc0002843-1575043694:11579..12021Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002843supercontigsc0002843:129..12021 +
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.39606	2.67982	2.89476	3.00693	9.83005	5.02731	3.27289	3.0476	2.89862	4.02659	3.48999	3.69757	2.50694	2.79448	2.36499	2.28855	2.60828	1.42713	2.67577	4.25352	3.62328	4.46308	0.691748	0.822173	1.86943	2.46141	5.41021	5.94198	3.84881	4.06954
Blast
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BLAST of TCONS_00041390 vs. Swiss-Prot (Human)
Match: RAGP1 (Ran GTPase-activating protein 1 OS=Homo sapiens GN=RANGAP1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.432e-36
Identity = 65/124 (52.42%), Postives = 94/124 (75.81%), Query Frame = 1 
Query:  379 EVSFLGKELKLDNEEDGEEIANAIKNCRDMETLKLQGNTLGVGASKVISEALKQQSAFKKALWSDMYTGRLRSEIPKSLELLSEGIITAGAKLTVLDLSDNAFGPDGVDGIKKLLRSESSYLLH 750
            ++SF GK LKL+  ED +++   I++   +E L+L+GNT+GV A++VI++AL+++S  K+  WSDM+TGRLR+EIP +L  L EG+ITAGA+L  LDLSDNAFGPDGV G + LL+S + + L 
Sbjct:   22 QLSFKGKSLKLNTAEDAKDVIKEIEDFDSLEALRLEGNTVGVEAARVIAKALEKKSELKRCHWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLQ 145
The following BLAST results are available for this feature:
BLAST of TCONS_00041390 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RAGP13.432e-3652.42Ran GTPase-activating protein 1 OS=Homo sapiens GN... [more]
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