TCONS_00041193 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041193
Unique NameTCONS_00041193
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1996

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041193 ID=TCONS_00041193|Name=TCONS_00041193|organism=Clytia hemisphaerica|type=transcript|length=1996bp
ATTCTAGTTTTCAGCtcgcttttttttcaaaatcaatccTCAATCGATCC
TCGAACGCAGAAAACTAAAAAGATCAATACTTTTTAAATTGAATGTGGAG
GCAGTTTATTTTATTTGCTAACTGCTCAAGTAGTTCAATctcaaacaaaa
caacaaacacaAAAATGGCAGAAGTGTCTTCAGTGATTGAATTCAATGTG
AATATGACTTGTGGTAATTGTGAAAATTCAATTCGTGACTCCCTTTCAAA
ATTACGAGGTATAACCTCGGTCACTATCAACATTCAACAACAGCAAGTTA
TCGTCACAACAACCTACCCTTCAGAAGTAGTTCAAAAAGCTATCGAATCC
ACTGGAATGCTTGCTATTGTCAAAGGACAAGGACTAGATATTTCTAATCA
CATGGGTGCTGCTATATCTATTTTGAAACGTAATCAAAGGACACTTGGAT
TAGTACGTTTTACACAGATCACAGAAGAGACTTGTGTTATTGATGGGTCA
TTCAACGGATTAAATGCTGGAAAGTATGGACTTCATATTCACGAGTTTGG
TGATTTGTCTGCGTTCTGTGAAAGCACTGGTGACGATTACAATCCAACAG
AAAGTTGCCATGGTGACCGAGAAAACACATCTAGAGTAAAGTTTCTTTTG
AATGTTGAAAATCCATAATATTAGAAGATCCAATTCCTTAGAATTCCTTA
GTTTGCTGTGAGCTGAATGAATGCAAGCTTTGATCACAGTGTGGTGAGAG
AACCACCTCATTCTCTGATATTTGCTAATGTTCCCTTACACAGTGTGGTG
AGAGAACCACCTCATTGTCCGATATTTGCTAATGTTCCCTTAAGAAAACC
TTAGTGTCTTTACGAAGACGAATTTTACATGATGATGGCCTAAATTTAAT
TCCAACTCTAATTTAATAGGATAAATTTTCACAAGATTTGATTTTATAAA
tcatttttgctaatttttaccatttttttcgaaaatagaaCTCACCAATT
TGCATGAGATCAGCGTAAATATGCTAATTTTGACGTTTACAGAAtcattt
tcaacaaatttttggCTGTTTCCcgctgaaattttttaaaatgcttaatg
caaaagaaaattttgcgaaattAAGAATTTCATAGGAGGTTCACACTTTG
AAATGAAATATATATGAtgtaatttgttgttttataaTAGCATGCAGGAG
ACATGGGAAATGTAGAAGTCGGTGAAAAAGGTTCGGCTGTTTTTCGTTAC
CAAGACAATATGATTAAGGTTTGGGACATCATTGGGCGCTCTGTTGTGCT
tcatgaaaaagaagatgacTTCTCGAATGACCCACATGGAAATGCTGGAA
AAGGattagcCTGTGGAATCATTGCTCGTTCAGCTggtttatttcaaaac
aaaaagatggtATGCTCGTGTTCTGGTAAAACCATTTGGCAAGAAAGAGA
AGATGCTAAGAATGAAATGGGATGATAATAAAAACATTGTTGTGTTTCAT
CAAATGACCGAACCACAAGCAACAATATTTGGCAAGGAATAGAAATTGCT
TGAGTTTAACGGAAGTTTAACAAAGCTAAGAACACCAACGTACCCTCGCG
TATTACGAATCCAATGTCTCGAAATTGAATATCGACTTATATGAAGATGG
ATTTTTGTTTCATCAGGTTTTATTATTATGACTTGAGAATATGGATAAGG
CGCTACATTTGATTTTTCGTGATGAATGGGTTTCCATTATAAAATCGGCA
AGATTTTCAGTCTGGAAATGAAATGAGGGAAATATTATGTACTGCTTTGA
AATTATGTCAATTGCAGTTATTCAAATTTATTCGATTTATTGTACCGGAA
TTCAATGCTAGAATTATTGACGTACAGTATTGTGTTATGGAAGAAATAGT
GTGGAGAGACATTTTCATAATTACAGCTATCATTTATTAATTTGCGTAAT
TTATTACTTTTTTGATATAAAGAAACATTATCACTGAAAATCTTTG
Run BLAST on NCBI

transcript from alignment at sc0002744:7621..16104-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041193 ID=TCONS_00041193|Name=TCONS_00041193|organism=Clytia hemisphaerica|type=transcript|length=8484bp|location=Sequence derived from alignment at sc0002744:7621..16104- (Clytia hemisphaerica)
ATTCTAGTTTTCAGCTCGCTTTTTTTTCAAAATCAATCCTCAATCGATCC
TCGAACGCAGAAAACTAAAAAGATCAATACTTTTTAAATTGAATGTGGAG
GCAGTTTATTTTATTTGCTAACTGCTCAAGTAGTTCAATCTCAAACAAAA
CAACAAACACAAAAATGGCAGAAGTGTCTTCAGTGGTAAGACCTTTTTTG
CGTCTCCCGCGCCCCCTCCCCTTTGTCATATTTTTTACCGTGAGATCGAG
TAACTTGCATCAGGGGAGGCTAACATGCATAGCCATCAAATGACTGACCA
ATAAAAACAGCAAAATTTCAAAACCATTAAACCTGCAGCTCTACTCTACC
ATTTTTGTTTTGATTTAACTTTGTATTTTAATTTAATGACCAGCTGGGTC
ATTCATTTGAGGGCTATGCATGTTAGCCTCCACTGATGCAAGTTACCCGA
TCTCACGGTACCAGTTAAAATCAATAAGATCAATAATCGAATCAAGAAAA
GATTGATATGTGATTGCTTCTCCAACCCTCTGCTGAACATATCTGCACAT
CACAATATGTTAGAGTGTCTTCGCGAGGCGAAGTTGACAGCTATGTCATA
CATTTCTAGTCATTCTAGTCTGAGCTTCCATAAGGCAGTTTGATGCGTTT
TTTTCGTATATACTTTTTCAGTTCCAAATTCTCATCCTCCTTGACCTTGC
ACATGCATCATTTTTTCGATTTCTATTTCTATTTGGTTGAGTCGCAGGAG
GCTTTGAGGCTCTTTCGCAGCTATAGGCGCTTTCAATTAATTAGCGCCCG
TCAGCACCTTGAACTGACTACCCAATTCCCCTCACACGTCATGGGTTGAT
CCAGGCTAGGGTTCATTCACTTGCTAAGTGAGCCGCTGCGAGTAGGAATA
GACCTTTTTTTAAAGAGGCAGCCATGTTGAATAATTATGTACTCCAGCAT
AAAAACAAATGATACAGCCATGCATAATTTTTAAAATATGCACGATGATA
CAGTAATTATACATGGCTGTATCATTGTTTTTATGCTGGAGTACATAATT
ATTCAACATGGCTGTCTCTTTAAAAAAAGGTCTATTGAACCTCAGTTGCC
TGCTGTGCAGCAACCAAACCAAGGTCAATGACCACTACCGTAAGTTGGTC
TAATATCGACATCCCTCGTCTAATTCAGACACCCTTCTTTAGAGAAAGGA
ATAGTATGAAAGCTTGAATCACTGATTGAAAAAGGATTATTCCTCTCTGA
CCACTAAACAAAGAAAAACAGTTTCAACCTTCCTATAAATTTCAGCTGAT
AAAAAGGGTGTCAGAATTAGAGGAGGGTTGTCGACATTAGACCAAGTTAC
GATATACTACAGCCCTTAAGCATAGGTTCAGCCCCCCTTACTTTTGGGGG
AGGGGCTAAGGAATATTTTGGCCTTTAAAGAGCCTGGGGGCTAAAAAAAT
TACCAAAATATTTGGGGGGACCTAGATTGTTGGGGAGAGCCTAGATGATC
TGACTGAGGGGCTGTTCAGCTAAATTCAAAAGATCTCTTATTTTACTATT
AAATCAAATATAGAAAGCAAAAGATTTGTAAACATAAATATTAAATCAAG
TAAAATTTAGTTTTCATTTATCAGTACTGTACTCGCATATGTTTTTATTG
ACTTCTCTCTACGGGGGCGGGAGATCAATGTTTTTGTTTTTGTTTATCTT
GGGACCTGAAGTGTTAGGGGACCTAGCACAAGGCAATTTTTTGGGGGGAG
CTAAATTGTTGGGGGGACCTTACTTTGCTTGGGGGGAGCTAGAAACCTGG
CTGAAGCTATGTTAAGATATTAATTGTTTCACACCATTGCCTCCATTCGT
TGCATGTTGCTAACCTGATCTTTCATTTGACATTTGATTTCTCTCTTCCA
TTCACTTTTCATTGTCTCCTCTTATTCTTTTAGTTGTCTCCTCTTATTCT
TTTCGTTGTCTTCCATTATTGCCCTCCTGGTTGATCAAGTTCCCAAAGAA
CTTCCCCTTTTGTTAGTTGAATAATTTGGTTCTTCTCCATTTCTTTTGTG
AAATACTTGGTTTTTGATTCACAACCACATTTAATGTATAGCCTTTCCGC
TGTTCCATTCCCTTGAGGTTCCTCCCTGCTGCTTTAACTGTCTCTTTGCT
TCTCCAGTCATAATATCATTAACGTACACCATACTTCTTACCTCTACTCT
ACTCCTGGTGCAACACTAGCACTGTGTTGGTCTCATCCACTTGGTTCCCT
TTCTCATAGGCCTGAACTGTTCAGTTGTTTCATTATTTCTGTTCTCCAGG
CCAAAAGCTCATGGAATGAAAAATATATAGCTGTGACTGTCAGAATAACC
TGAACATTGATCAATTTTTTAGTGCCTAATTTTCATCTTTCATTGTTTTT
GTTTTATGTCTGTACGTGTCAGGCTGGAAAATACAGATAAGTCAATAGGT
TATTTGATATTCTTGGACTTTGCAACCTAATTATTACGTATTTTCTGTTT
TTTTATATTGATTTTGATTTTGACCCAATAAACAATTCATTTCATTGACA
TCTATTAATCTTTATCTCTCGTCAGCTATTTTATATCAGGCAATTGGTGA
TTAGGCACCGTTTTTAATGAAATCAAAAAATTAAAAAGGGGTGCATTTAC
AGTAACAATTCAGTCTGATTATAATTGTCTAATTATGTCAATTATTTGTG
ACAGATAGGAATAAAATAATGGATTTCTTTAAATAGTATCTTAAACTAAA
AATTTTTGGCAGAAAGAAAATTTGGTGGATTTGACATATTTAATAAAATT
TTGCCAAATTAAGTTCCTTAAAACTCCTGCCTAATTACCTTTACCTGGGT
AAACCCATGCCACATTCGAGTGGGATTGGCTAGTCAGGCGATCATTGAAA
GTGTCCATAGTTGCGAGAATGGGTCCTCAGAGCCTCCTGCAACTCAACCA
AATAGAAGTTAGAAATAGAAATAATTCAAATCGCTTTGTTCATTCCCCGA
ATTCGTGCTAAAGGGGCCATTCAAAAAGTACTCTCGGGTACCTAATAGCA
GGGGGGTTTAGAATAAGCAGGGGGGTTGGAAAAAATCTCAAAAATTGATA
AGCAGGGGGGGAATAAAAATGTTAAGGGTGGAAAATTTTCAAAAAGGAGG
CTAATACAGCAGAATTAGGGCAAAAGAGGGAACTTTCAAAAAAAATTTCC
CAAAAACCAATAAGCAAGGGGGTTGGAATAAGAATGTCCTGGGTGGAAAA
TTTTCGAAAAATTAATTAGCGGGCCCCCCGGCTATTAGGTACCAGAGAGT
ACATACACTCTGAGGGGGGAGGGGAAGTCCTTCGAAAAGCGTACGAAGAC
GTACGTGGGGGAGGGGGTTCATCAAGAACTGTACGTTTGCTTTGCAATCT
TTTTCAAGCTATTTTTTCTAACTTTCTATTTGAAAAATCAAAATATAAGA
AACCTAACCCTTCTTATTTGTGTTATCTATATATCAACCTATGATAATCT
TTCAGTTTCTTTAACTTTGATCTTGTCTTGAAAAATTTATATCATTAAAA
TCAAGAGCAAACCTGCGCCAGTCAATTTCTTTTATAATTAATAATTTTAG
ATTTTTCTCCTAAAGAGTAAGCGGAAAAGCGTGATGTTTTAAACATCTAG
CACTGAAGATGGTTTTACCGAAAAACTTTTGCTAAGAATAAAATAAAACT
TGTTGTTTTTCTTACTATGTTAAAGATTGATTTTGTTAAAAAGATAGATA
ACATTATCATAATTTTCTTTCAGATTGAATTCAATGTGAATATGACTTGT
GGTAATTGTGAAAATTCAATTCGTGACTCCCTTTCAAAATTACGAGGTAA
AACCTAGTGTTGAGAAACAATGGACTATTTTAGAGACTATCTGTGCCTCT
TGATGTGTGTAGTGTAGTAATTCTTTATCATCTAGGACAGAGTTTTACAC
TTTTCAAAAAATAAGTTTTGACCTCAAAGATGATTAGGCACCAGGGCCCG
GTTGTTCAAAAGTTGATTAGATTGAATCCCAATTACTGCTAATCGCGATT
AGATTTCGATTACTTTAACCGGATTAAATTTTGCGAGCTAAAAAAATCGT
GAAATTTTCTGGATTTAATTTCGCGAGTCAGAGTTTTGAAATATTTCGCG
TGGATTTAATTTCGCGAATAAGCCAGAAAACAGCTGATAGCCATTTTTTG
CCATAAATGGAGACTTGGAACTAGTTTCTCTGCCAAAAATACAATTTTAA
AAGTTTTGTGGTGGATTTAATTTCGCGAATCAGGAATCTCACGCGTGTTC
GCGAGTTCTAATTTCGCGAAAATGGCAAAAATTTGCGAAATCGCGAAATT
TAATCTCGCGAAAATTAATCCGATTAAAGTAATTAATCCTGACAATTAAC
GGCAATTGACTTCCGTTGCTCAAACAACAGATTAAGTAACCGTGGACATT
TTTCCTGTGTTTTCAAAAATCTTGACATCACTTTTCGAATGTTTCCAAAA
CATTCGAAAATCTTTATTTGCTTGAATTTCTCACTTCGATGCAGCGACTT
CACTTGTTTTGTAAGAAAAAGCTTCTTAATCCTTGCTAATCCTGGGTCAG
AGCAGGATTAAAATTTGGCTGATTTAATCGGAATTTAATCTAGATTAAAG
CCTAATTTTTTTCAAACAACCAATTTTTTGTGCTAATTGGCGCTAATCGA
GATTTAATCAAAAATTAAGCTAATCGGCCGCTAATCCACTTTTGAGCTAC
TGGGCCCAGTGGTTCAAATTTAGAAATGGATACCTAAAAATTCTAAGTAA
ATATATATCTTCTTCTGAAATATTGAAAATCGAAATACTTCAAGATGTTT
AAAGTTTTGGCCCTAAAAATTCTTCCATAGGTAACCATAGTTTTTTCCTA
ATTCTAGGTATAACCTCGGTCACTATCAACATTCAACAACAGCAAGTTAT
CGTCACAACAACCTACCCTTCAGAAGTAGTTCAAAAAGCTATCGAATCCA
CTGGAATGCTTGCTATTGTCAAAGGACAAGGACTAGGTACAAGAACAAAA
TATCGTAAACAATTCTTTTTACAAATACTCATGTATCAGTTTTTGGGTGT
TATTTAAAAATGTCTAGGGCATAAGGCAATTAAGTAAGATTCATTATATT
GAAAAAGTTTTCCAATTGCTCTTTTAAAGTTGGTCATAAATGTCCTTCTG
GCTTGAAAGGATTTCCTGAATTTGGAATATTTTCCTAACAGCTTGGGTCA
AGAGGCTCCTTTCAATGAAAAAAAAAACAAATTACACATTTTTTTCCCAT
TTCAGATATTTCTAATCACATGGGTGCTGCTATATCTATTTTGAAACGTA
ATCAAAGGACACTTGGATTAGTACGTTTTACACAGGTAATATTTCCCAGC
TCATATTTCTGAAAAATTAATGTTAGTAGTCTTCAATCTTTTGGTTGTTT
TACAAAACCTTTTTTTAATTCAACTTATAAACATCACTTCTCGTTTCATA
TACACGCTTTTTTTATAAGAATAGTGTACTTTGGATGAGGGTCAAGTATT
CTTAAGAAAGTACCAAAATTGAGGGTGAAATATTCTTAACGTATTTTTAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTTTTATAAACATGAGAA
ATGATCAATTTGAGAGTTTTGGACTTTTGAGTGAACATTTGGGTTAAAAT
TACATTTCTTCCTCAAAGCTTTAATTTATCTCTAACAAAGGAAGCATGAA
GCAGCAATTTTCACCCTGATATTCTTATATAAGATATTCTTATAAAAAAA
AGCGTGTAATTCAAGCTCACCTCACCTCACCTCACGAAGTCTTCATGTAT
CAAAACAGGAGGGATTTCTACCCATTCGCAAAAAATCTTTTCCCGATAGG
AAAACAACACCATGAAATTTCATCCTCATCGGAAAACAATGCAACTCTAA
CCTCACTTGAATAAACTATGAGAATACCCATTTTTGCGTTTAGTTCCTTT
ATCTTATTTCTAACGGAGTCTACTGCGCAAATCCTTTATTTATTTCAAAT
ATTAGGTTAGATTGATTTATTTTGTGTATATTAAGTTTTATGTTTAATTG
ATTGTAGATCACAGAAGAGACTTGTGTTATTGATGGGTCATTCAACGGAT
TAAATGCTGGAAAGTATGGACTTCATATTCACGAGTTTGGTGATTTGTCT
GCGTTCTGTGAAAGGTAAATTATAGCCCGGATTTACGAATTTAAAAACAT
CTGATGATGAATACTTGTTCTTATGCGAAGCGTCAAGACAGGAGAAATGT
TAGATCTTTTTCTTGTACACAATAATATGGTACGTTTTTAACGGCTGTTT
ACCTGGGATGTCATTTATTATAATGTCTAAAAAACTCTTTAACCTTAAGA
TGATATTTATTGAGCATAGTATTTATTTTATAGCACTGGTGACGATTACA
ATCCAACAGAAAGTTGCCATGGTGACCGAGAAAACACATCTAGAGTAAAG
TTTCTTTTGAATGTTGAAAATCCATAATATTAGAAGATCCAATTCCTTAG
AATTCCTTAGTTTGCTGTGAGCTGAATGAATGCAAGCTTTGATCACAGTG
TGGTGAGAGAACCACCTCATTCTCTGATATTTGCTAATGTTCCCTTACAC
AGTGTGGTGAGAGAACCACCTCATTGTCCGATATTTGCTAATGTTCCCTT
AAGAAAACCTTAGTGTCTTTACGAAGACGAATTTTACATGATGATGGCCT
AAATTTAATTCCAACTCTAATTTAATAGGATAAATTTTCACAAGATTTGA
TTTTATAAATCATTTTTGCTAATTTTTACCATTTTTTTCGAAAATAGAAC
TCACCAATTTGCATGAGATCAGCGTAAATATGCTAATTTTGACGTTTACA
GAATCATTTTCAACAAATTTTTGGCTGTTTCCCGCTGAAATTTTTTAAAA
TGCTTAATGCAAAAGAAAATTTTGCGAAATTAAGAATTTCATAGGAGGTT
CACACTTTGAAATGAAATATATATGATGTAATTTGTTGTTTTATAATAGC
ATGCAGGAGACATGGGAAATGTAGAAGTCGGTGAAAAAGGTTCGGCTGTT
TTTCGTTACCAAGACAATATGATTAAGGTATTTACACTAAAAATAGTCAC
TTTCCTAGAACTTAATGTGTAAATTAAGTTTATACTCATTTCAATACCTA
CCCATATTTTGAAGAATCTGAAAAAGTGCCGGTATTTTTTGAGTCCCTAA
CTCTTGTTTTAAAGTCTCGAAATATTGCAAGCAACGTTCAATTCTGTTAT
AATTAAGAGAGATCAAGTTCAATTTCCTCTTTCAAAATTCATGTTTGTTT
AAAGGTTTGGGACATCATTGGGCGCTCTGTTGTGCTTCATGAAAAAGAAG
ATGACTTCTCGAATGACCCACATGGAAATGCTGGAAAAGGGTGAGCTATT
GTATTTTGTGTATTAACCAAGGAGACAATGTAAACATTTTCTAAGAACGA
GAAACGGCGTCTGATGTGCTTTTAAAGGAAGAAAACTCATTTTGTGTATT
TTTGAAGGAAAAAATCAAAAGATCTTTCGTAGATTTTAAAGTAATATTTC
CGATATCTTGAAATTTGATAACTTTTCACGGATACCAATCCCATTTTCAA
AAGAAAAAGGTTGAAAATTTTGTGTATCTTTCAAAAAAACTTTGACTTCT
ACTTGAAGAAAATGATAGACAATGTTCATAGTACCAGTGTTTCTAACAGT
TAGGTTTTGTTAATAAATATTTTGACTTTATTTTTTTTTCAGATTAGCCT
GTGGAATCATTGCTCGTTCAGCTGGTTTATTTCAAAACAAAAAGATGGTA
TGCTCGTGTTCTGGTAAAACCATTTGGCAAGAAAGAGAAGATGCTAAGAA
TGAAATGGGATGATAATAAAAACATTGTTGTGTTTCATCAAATGACCGAA
CCACAAGCAACAATATTTGGCAAGGAATAGAAATTGCTTGAGTTTAACGG
AAGTTTAACAAAGCTAAGAACACCAACGTACCCTCGCGTATTACGAATCC
AATGTCTCGAAATTGAATATCGACTTATATGAAGATGGATTTTTGTTTCA
TCAGGTTTTATTATTATGACTTGAGAATATGGATAAGGCGCTACATTTGA
TTTTTCGTGATGAATGGGTTTCCATTATAAAATCGGCAAGATTTTCAGTC
TGGAAATGAAATGAGGGAAATATTATGTACTGCTTTGAAATTATGTCAAT
TGCAGTTATTCAAATTTATTCGATTTATTGTACCGGAATTCAATGCTAGA
ATTATTGACGTACAGTATTGTGTTATGGAAGAAATAGTGTGGAGAGACAT
TTTCATAATTACAGCTATCATTTATTAATTTGCGTAATTTATTACTTTTT
TGATATAAAGAAACATTATCACTGAAAATCTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025197XLOC_025197Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041193-exon-sc0002744-1575043694:15920..16104TCONS_00041193-exon-sc0002744-1575043694:15920..16104Clytia hemisphaericaexon
TCONS_00041193-exon-sc0002744-1575043694:12259..12331TCONS_00041193-exon-sc0002744-1575043694:12259..12331Clytia hemisphaericaexon
TCONS_00041193-exon-sc0002744-1575043694:11069..11197TCONS_00041193-exon-sc0002744-1575043694:11069..11197Clytia hemisphaericaexon
TCONS_00041193-exon-sc0002744-1575043694:10720..10799TCONS_00041193-exon-sc0002744-1575043694:10720..10799Clytia hemisphaericaexon
TCONS_00041193-exon-sc0002744-1575043694:9841..9947TCONS_00041193-exon-sc0002744-1575043694:9841..9947Clytia hemisphaericaexon
TCONS_00041193-exon-sc0002744-1575043694:8928..9621TCONS_00041193-exon-sc0002744-1575043694:8928..9621Clytia hemisphaericaexon
TCONS_00041193-exon-sc0002744-1575043694:8615..8700TCONS_00041193-exon-sc0002744-1575043694:8615..8700Clytia hemisphaericaexon
TCONS_00041193-exon-sc0002744-1575043694:7621..8262TCONS_00041193-exon-sc0002744-1575043694:7621..8262Clytia hemisphaericaexon
TCONS_00041193-exon-sc0002744-1510915933:15920..16104TCONS_00041193-exon-sc0002744-1510915933:15920..16104Clytia hemisphaericaexon
TCONS_00041193-exon-sc0002744-1510915933:12259..12331TCONS_00041193-exon-sc0002744-1510915933:12259..12331Clytia hemisphaericaexon
TCONS_00041193-exon-sc0002744-1510915933:11069..11197TCONS_00041193-exon-sc0002744-1510915933:11069..11197Clytia hemisphaericaexon
TCONS_00041193-exon-sc0002744-1510915933:10720..10799TCONS_00041193-exon-sc0002744-1510915933:10720..10799Clytia hemisphaericaexon
TCONS_00041193-exon-sc0002744-1510915933:9841..9947TCONS_00041193-exon-sc0002744-1510915933:9841..9947Clytia hemisphaericaexon
TCONS_00041193-exon-sc0002744-1510915933:8928..9621TCONS_00041193-exon-sc0002744-1510915933:8928..9621Clytia hemisphaericaexon
TCONS_00041193-exon-sc0002744-1510915933:8615..8700TCONS_00041193-exon-sc0002744-1510915933:8615..8700Clytia hemisphaericaexon
TCONS_00041193-exon-sc0002744-1510915933:7621..8262TCONS_00041193-exon-sc0002744-1510915933:7621..8262Clytia hemisphaericaexon
TCONS_00041193-exon-sc0002744-1491911889:15920..16104TCONS_00041193-exon-sc0002744-1491911889:15920..16104Clytia hemisphaericaexon
TCONS_00041193-exon-sc0002744-1491911889:12259..12331TCONS_00041193-exon-sc0002744-1491911889:12259..12331Clytia hemisphaericaexon
TCONS_00041193-exon-sc0002744-1491911889:11069..11197TCONS_00041193-exon-sc0002744-1491911889:11069..11197Clytia hemisphaericaexon
TCONS_00041193-exon-sc0002744-1491911889:10720..10799TCONS_00041193-exon-sc0002744-1491911889:10720..10799Clytia hemisphaericaexon
TCONS_00041193-exon-sc0002744-1491911889:9841..9947TCONS_00041193-exon-sc0002744-1491911889:9841..9947Clytia hemisphaericaexon
TCONS_00041193-exon-sc0002744-1491911889:8928..9621TCONS_00041193-exon-sc0002744-1491911889:8928..9621Clytia hemisphaericaexon
TCONS_00041193-exon-sc0002744-1491911889:8615..8700TCONS_00041193-exon-sc0002744-1491911889:8615..8700Clytia hemisphaericaexon
TCONS_00041193-exon-sc0002744-1491911889:7621..8262TCONS_00041193-exon-sc0002744-1491911889:7621..8262Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002744supercontigsc0002744:7621..16104 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.313786	0.749642	0.830844	1.11485	0.597842	1.06465	0.543103	0.523862	0.937416	0.647474	0.867299	1.24038	0.367027	0.242426	0.550744	0.597048	0.439484	0.419131	0.47946	0.329212	1.38233	0.906816	0.299729	0.400179	0.525522	0.179244	1.05167	0.698721	0.288128	0.151791
Blast
[Close]
BLAST of TCONS_00041193 vs. Swiss-Prot (Human)
Match: CCS (Copper chaperone for superoxide dismutase OS=Homo sapiens GN=CCS PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.532e-27
Identity = 61/151 (40.40%), Postives = 98/151 (64.90%), Query Frame = 3 
Query:  183 VIEFNVNMTCGNCENSIRDSLSKLRGXXXXXXXXXXXXXXXXXXYPSEVVQKAIESTGMLAIVKGQGLDISNHMGAAISILKRNQRTLGLVRFTQITEETCVIDGSFNGLNAGKYGLHIHEFGDLSAFCESTGDDYNPTESCHGDRENTSR 635
             +EF V MTC +C +++R SL  + G+  V ++++ Q V+V TT PS+ VQ  +E TG  A++KG G     ++GAA++IL       G+VRF Q+T E C+I+G+ +GL  G +GLH+H++GDL+  C S G+ +NP  + HG  +++ R
Sbjct:   13 TLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGSGQLQNLGAAVAILGGPGTVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNPDGASHGGPQDSDR 163

HSP 2 Score: 111.309 bits (277), Expect = 8.461e-27
Identity = 52/92 (56.52%), Postives = 64/92 (69.57%), Query Frame = 3 
Query: 1191 HAGDMGNVEVGEKGSAVFRYQDNMIKVWDIIGRSVVLHEKEDDFSNDPH------GNAGKGLACGIIARSAGLFQNKKMVCSCSGKTIWQER 1448
            H GD+GNV     G A+FR +D  +KVWD+IGRS+++ E EDD     H      GN+G+ LACGIIARSAGLFQN K +CSC G TIW+ER
Sbjct:  164 HRGDLGNVRADADGRAIFRMEDEQLKVWDVIGRSLIIDEGEDDLGRGGHPLSKITGNSGERLACGIIARSAGLFQNPKQICSCDGLTIWEER 255
The following BLAST results are available for this feature:
BLAST of TCONS_00041193 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CCS1.532e-2740.40Copper chaperone for superoxide dismutase OS=Homo ... [more]
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