TCONS_00041092 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041092
Unique NameTCONS_00041092
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1670

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041092 ID=TCONS_00041092|Name=TCONS_00041092|organism=Clytia hemisphaerica|type=transcript|length=1670bp
ACCAACTTTGAAAGAAGATTTGAGGAACCTATTGGATTCAGAAGAAGGCA
AAAAATGGAGTGATTTCAAACTTGTTCTAAACGGGGAAGCTTTTGAGACA
CACAAGaTTGTATTGGCTGCTCGGAGTAGcTATTTTGAAGCTATGTTTCG
CTCTTTCTCGCCACCTGACAACCAAGCTAATgTGACTATTGGAGAAACTA
TTCCTTCACCGCAGTCCTTCTCATCGCTTTTGCGGTACATTTACTACGGC
GATGTTACAATGCCACCTGAAGACTCATTGTATCTGTTCTCTGCACCCTT
CTATTATGGCTTCACTAATAGCAGACTCCAGgcattttgtaaacaaaact
tagAAATGAATGTCACAAACCAAAATGTCATCCATATACTCGAGGCATCG
CATGGTATCGGTGCCGTAGACATGAAGCGGCATGCGCTAAGTATTATCGT
TCAACAGTTTCATAAGGTCGCTCGTCTGTCGGACATTAGGCGCTTAAAGA
AAGAACTTTTACTTGATATATTAGATGCTGTAGCTGAGTTCATGACTCCA
CCTCCCAGTACCACGGAAGAAGTTGTACCGGCATTTTCTTCTGAAAGTTG
AGAACTATAGATTGTTGCCCTTTTGAACTTATGCTGAGGATTGTGGTGCT
GTGATTTATCATGGACTCTTATTTGGGCTCCAAGTTTTACTTGTGTTTTG
CAAGctaattgggctattccagaaaacaCTTTTACCCCAGAGGAGGTTTT
TTTAGGGAAAGGtgacccctggattttttttcaggacccccttggatttt
tttctgattttttttaaccaccctggattttcgacctcgttttactgacc
accctggattttccaaCTTATTTCACttaccaccctggatttttgcaCTC
GAAAAATCACACCCTCTGGATTATTTTATTTTCGAGGCCAcactggacgt
cacacctcctcaacatagggggcacagactatttctggaatagccagATT
CTTCCCAGCTTTTCCCTGGAAATGAATTCTTTcagtttaaaatgttctta
aaaacttCGCCACTGACAAAACCAATTGTGAAATTGTACAGAAACAAGAA
GAAAAGCAACAAAATTGCTGAAAAATCTGGTAAAAGCTTGATATATGGAA
AGACTCTTATTTTGGGCTTTGAGACAATGAGAGCTTAGCTGGGTTTTGTT
TCAAAGAAACTGATCAAACCCAGAGACAGGCTTACCCAGAAACAAACCAA
TGGTTATATTTAAAGGAAAATGGTAAAGTTATCATTGTATCAGGAGTTGG
GTTTGCCGAGCAGTggaataaatgtattttattctGAAGTGGTAGAACAT
ATTTCAATACAGTTTGTCCGGTTCAGCAGAACAGAATTTCTATAAAGTAA
AAAGTTCTCATACTTTGCATTGCTTTTTATGACCTAAATATTCGATAATT
TTATTACGTTTGGGAATCGGATAATCTATTGAATGAGAAAAGACATTCAG
TCCTTTTGCAAATTccagttttaaaattttaataccTGCTTCGCTTTTTT
TCCGAACATACTGTAGATTTGTAAGAGTTTATGATACACGCCCTTTttac
agacccggtgggactccaaaaattggccaaaatattgtctcAGTTGAAAA
TTATTCTCAAGCTTTTGTCC
Run BLAST on NCBI

protein sequence of TCONS_00041092-protein

>TCONS_00041092-protein ID=TCONS_00041092-protein|Name=TCONS_00041092-protein|organism=Clytia hemisphaerica|type=polypeptide|length=199bp
PTLKEDLRNLLDSEEGKKWSDFKLVLNGEAFETHKIVLAARSSYFEAMFR
SFSPPDNQANVTIGETIPSPQSFSSLLRYIYYGDVTMPPEDSLYLFSAPF
YYGFTNSRLQAFCKQNLEMNVTNQNVIHILEASHGIGAVDMKRHALSIIV
QQFHKVARLSDIRRLKKELLLDILDAVAEFMTPPPSTTEEVVPAFSSES
Run BLAST on NCBI

transcript from alignment at sc0002700:9214..14305-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041092 ID=TCONS_00041092|Name=TCONS_00041092|organism=Clytia hemisphaerica|type=transcript|length=5092bp|location=Sequence derived from alignment at sc0002700:9214..14305- (Clytia hemisphaerica)
ACCAACTTTGAAAGAAGATTTGAGGAACCTATTGGATTCAGAAGAAGGCA
AAAAATGGAGTGATTTCAAACTTGTTCTAAACGGGGAAGCTTTTGAGACA
CACAAGGTATTTTATGACTGTTCTCGCCCTACATTTAGAGGGGTCTTGGA
TACACACAAGGGGTGTGTTGAAAGCTTGAATTTCCTAAGGGGGGTTCGCC
AGTTAGGGGGGGAGGGGTTCTTCATAAAATTATGTACAAACGTTTCCTGA
GGGGGTCTGAATTTTCAAATGTATTTCCGATGGGGGTTACCACTTAAAGG
TGGTGTCTTCCTACCTAGGGGGTGGTCTTGACCCCTCTAGAAACTATGCT
AATTTCTTCTTCCTGTACTTATCTCAGTAGCGAAATTATGTATTCGAAGT
AAATCGAAGGAGAAGGTGTAAAGTAAAGTTGATATACCTCCAAAATCCCC
GTCCACTTTGCCCGACGACGGTAAAAAAAAATAAAAAATGCCGTCGTCTC
TTTAGGTGAGCAAAAGCGATACAGAGCCGTACATCAACTATCGACTTTGT
TTTGCGTCGACTTACCACTTACCGTCGCCCTCAATATCCTCTGATACACA
AACTCGCTAATTTTGTGATTTTTACAGATAGAGATTTAGGAATGATGGTC
TTAACACTGGGACTTTTTTTGAGGAGATCCTGAAAATTTGACGTTTTGAA
ATCTTATATATCTAATAAGGATCAAACCTAAATGTTTCTATCTTGCTATT
TTTTTATGTTTAAGATTGTATTGGCTGCTCGGAGTAGGTGAGAAACTCAT
TTTATTACACACCACAAGAAGACTGGGTTCGAGTCTAACTTATGGTTCGA
AAATAACGTTAAAGTATCTATCTGATAATATAGCGGTAGTACAACGGCTT
CGTTTTTGACGTCGTTAAAAACCCTTGTAAACTCTGACTAAACCTTCTTT
TATAAGTAAGTTTGCGACCGCATTCAGAGGCGACCCGAAGGCTCGTCTTT
CGATAGCTATCTACCCAAAGGTAGGAGAGGGTGCCACTTTTTCTCCCTGG
ATTGCTCCACTTACCTTCGACCCTTCTCTTAGTTGCTGAGCATCAAGCAG
AGAGGCATCAAGTACCATTTTGGAAATCTTTGGTATGACCCGGCTGGGGG
TTGAGCCCAAAACTTTGCGCACCGTAGCCGGATGCTCTACCACTGTACTA
CAGTCGCTTCTTTTACGTAGTGAATGTGCAAATAATGAAATGAGTTGAAT
ATCAGCATGAAATATTTGACTTATCATACACTACCAACACGGAGTATGAT
TCATATTGGCCAATTGCATCGCTAGTACACTGAGCTATCAAGTCCAAACT
CGATCAGGAGTAGCTTCGTTGTTTTATCATTTTAGCAACCTGACATTGGT
TCATTACTTAAAGGTTTTATGTTTAAATAAGAGGATATCGTTCGCACTTA
CTCATCAATTTTAATTTACAAGCTTTCTCGCATTAGATTGACACGGATGT
GGAGAAAGGTTGGTCAGAAAGAGGAAAAGAAAAGCAATATTTTGTTTATA
TCGGCAGAATATAACAATAGGCAGACACTGTCCTGATATGAAATATGTGT
CTGATATGAAACGGAAACACTCATGTAAAAATAAAACCTTTAAAAACTAC
TTTGTTTGGAAACTATACCTGTTCTTCTTCTACGACATTTTTGGTATCAT
AATTTATCTATTCTTTTTCTGTTGTTTTTTTCAGCTATTTTGAAGCTATG
TTTCGCTCTTTCTCGCCACCTGACAACCAAGCTAATGTAAGTATATTATA
CGTATTATAAGTTTTAAACGAACAAAAAATTAAGATCAACGGTTTTTTTT
TGGTTTTTTTTTGTTTTGTTTTTTACGATCTTTCGTCTTTTTTCAAAACC
TCATCAAGTATCATATCAGACTAGGTTATATTCGCTGTCTTTGGTCGAAG
CTTTTTTGAAAGTGGTACCCGCAATGAAGCCATTGCTGTGTTTAAACGAC
GCTACATCATCACAAGTGTTTAAGGAAAATTAGACCTAAGCGGTCTCGAT
GTTTTGACGAATGCTACCATTAGGGTACCATTTCCAAAAAAACTCCGATG
AAAGGTTTCGGTTGGCCGAGATTGGAAACTCTCGTCTCCAGGCTCTACAC
AATCGACTCTTGTTTGTTTGAATTCAAAAGGGGAATCTCATTTGTTCGAA
TTACAAAGAGATTTGAATTATAGAAAGTAGTTTGGGAAGGTTTCCCTTGA
CGGGGTCTGGGAACAAGTTCAAATTATAGAGAGATTTAAATAATAGAAGT
TCGAATAAGCGAAAGTCTGCTGTAGATCAGTGTTTTTACACTGCTTGTTT
AAAAGCCGTCTAGTATGATAAATTACTATTACTACGAAGATAATTTTTTT
ACATTAGGTGACTATTGGAGAAACTATTCCTTCACCGCAGTCCTTCTCAT
CGCTTTTGCGGTACATTTACTACGGCGATGTTACANTTCGTTGTCTATTT
TCTGTTTGGATTTCTAGTTTTCTACTTAAGTTCTTAATATTTCGACCAGT
CATTAATAAAACCTTTTCACAGCCACAAGCATGATAAATTACTATTACTA
CGGAGATAATTTTTTTATATTAGGTGACTATTGGAGAAACTATTCCTTCG
CCGCAGTCCTTCTCATCGCTTTTGCGGTACATTTACTACGGCGATGTTAC
AATGCCACCTGAAGACTCATTGTATCTGTTCTCTGCACCCTTCTATTATG
GCTTCACTAATAGCAGACTCCAGGTATGTGTTAGAAAAAACGAGCAATTT
CTGACAAAGAGGTTTTTGAAGAAGGATTACGTTATTTTCAGGTGATTCGC
TCACTTTTTCTGTGGAAATTGCACAAAAATACTCAAAAAATGTAGCGAAC
ATCGGTAAGCTCCAACAATCTTGGACGCTCTTATAAAAAAACGCACAAAT
TGAGTATGGGTGCCTTAAATAAACTACACGTTTTTTTGTTTTTTTTTTAA
TAGACACACTTTTTAGAAACATGAGGCTCAGAATGCCTAAAAACTAAGAA
ACATCTAGTAACATGCGTAGTCGTGTTTTATAATAACAATTTTACAAGGA
CATAGGCACAGTTTCGGCAAACTCGAGAGTGCAAATTAAAAACAATCACA
CTCTCAAATTTCAGAAACAGCTAAAAGAAAGCAGATTTTTAGACCAATAA
GTAAACAAAGTAAGCATAATTAAGCAAAAAATCACAAAAAACAGCCGGGC
ATCAACCAAAATTTAATAGTTTCTTATAAAAAAGTTTGTTTTGAATTAAT
TTTGACTTTATTTCTAAATTTTTCATTTTTAGGCATTTTGTAAACAAAAC
TTAGAAATGAATGTCACAAACCAAAATGTCATCCATGTAAGTCATCCAAA
GCTCTTCTTAATTCACCCCTGTATCAGTGACCCGGTCAGATCCGCCCCTG
TGCATAATATGGTGAAAAAAGGCCAGAAAATCGCCTAATTTTTAACTCTG
GTAGGATATTTTGTAACCCCGGTCAAAATCGAAAAATAGTAAAGTCTAGG
AAAAACAGACTCCGCTAATACTTGAAAGTGAACTTTTTCCCTACCCCGGT
GGAAATTAGTTAAAGGTTTCCAAAGCAGTAGAGATTGTGAGATCCGGTGA
AATCATAGCCACCCCGGTGGATTTCAAAAAAACTTCACTGAGAAAGGGGT
GGTCCTTATACCAACTCGTAGTTACTCATTACAATTTTCTTTTTACCTTC
AGATACTCGAGGCATCGCATGGTATCGGTGCCGTAGACATGAAGCGGCAT
GCGCTAAGTATTATCGTTCAACAGTTTCATAAGGTCGCTCGTCTGTCGGA
CATTAGACGCTTAAAGAAAGAACTTTTACNTTCATAAGGTCGCTCGACTG
TCGGACATTAGGCGCTTAAAGAAAGAACTTTTACTTGATATATTAGATGC
TGTAGCTGAGTTCATGACTCCACCTCCCAGTACCACGGAAGAAGTTGTAC
CGGCATTTTCTTCTGAAAGTTGAGAACTATAGATTGTTGCCCTTTTGAAC
TTATGCTGAGGATTGTGGTGCTGTGATTTATCATGGACTCTTATTTGGGC
TCCAAGTTTTACTTGTGTTTTGCAAGCTAATTGGGCTATTCCAGAAAACA
CTTTTACCCCAGAGGAGGTTTTTTTAGGGAAAGGTGACCCCTGGATTTTT
TTTCAGGACCCCCTTGGATTTTTTTCTGATTTTTTTTAACCACCCTGGAT
TTTCGACCTCGTTTTACTGACCACCCTGGATTTTCCAACTTATTTCACTT
ACCACCCTGGATTTTTGCACTCGAAAAATCACACCCTCTGGATTATTTTA
TTTTCGAGGCCACACTGGACGTCACACCTCCTCAACATAGGGGGCACAGA
CTATTTCTGGAATAGCCAGATTCTTCCCAGCTTTTCCCTGGAAATGAATT
CTTTCAGTTTAAAATGTTCTTAAAAACTTCGCCACTGACAAAACCAATTG
TGAAATTGTACAGAAACAAGAAGAAAAGCAACAAAATTGCTGAAAAATCT
GGTAAAAGCTTGATATATGGAAAGACTCTTATTTTGGGCTTTGAGACAAT
GAGAGCTTAGCTGGGTTTTGTTTCAAAGAAACTGATCAAACCCAGAGACA
GGCTTACCCAGAAACAAACCAATGGTTATATTTAAAGGAAAATGGTAAAG
TTATCATTGTATCAGGAGTTGGGTTTGCCGAGCAGTGGAATAAATGTATT
TTATTCTGAAGTGGTAGAACATATTTCAATACAGTTTGTCCGGTTCAGCA
GAACAGAATTTCTATAAAGTAAAAAGTTCTCATACTTTGCATTGCTTTTT
ATGACCTAAATATTCGATAATTTTATTACGTTTGGGAATCGGATAATCTA
TTGAATGAGAAAAGACATTCAGTCCTTTTGCAAATTCCAGTTTTAAAATT
TTAATACCTGCTTCGCTTTTTTTCCGAACATACTGTAGATTTGTAAGAGT
TTATGATACACGCCCTTTTTACAGACCCGGTGGGACTCCAAAAATTGGCC
AAAATATTGTCTCAGTTGAAAATTATTCTCAAGCTTTTGTCC

Coding sequence (CDS) from alignment at sc0002700:9214..14305-

>TCONS_00041092 ID=TCONS_00041092|Name=TCONS_00041092|organism=Clytia hemisphaerica|type=CDS|length=4800bp|location=Sequence derived from alignment at sc0002700:9214..14305- (Clytia hemisphaerica)
ATTAGGCGCTTAAAGAAAGAACTTTTACTTGATATATTAGATGCTGTAGC
TGAGTTCATGACTCCACCTCCCAGTACCACGGAAGAAGTTGTACCGGCAT
TTTCTTCTGAAAGTTGAATACTCGAGGCATCGCATGGTATCGGTGCCGTA
GACATGAAGCGGCATGCGCTAAGTATTATCGTTCAACAGTTTCATAAGGT
CGCTCGTCTGTCGGACGCATTTTGTAAACAAAACTTAGAAATGAATGTCA
CAAACCAAAATGTCATCCATAATGCCACCTGAAGACTCATTGTATCTGTT
CTCTGCACCCTTCTATTATGGCTTCACTAATAGCAGACTCCAGGTGACTA
TTGGAGAAACTATTCCTTCACCGCAGTCCTTCTCATCGCTTTTGCGGTAC
ATTTACTACGGCGATGTTACCTATTTTGAAGCTATGTTTCGCTCTTTCTC
GCCACCTGACAACCAAGCTAATATTGTATTGGCTGCTCGGAGTAGCCAAC
TTTGAAAGAAGATTTGAGGAACCTATTGGATTCAGAAGAAGGCAAAAAAT
GGAGTGATTTCAAACTTGTTCTAAACGGGGAAGCTTTTGAGACACACAAG
ATTAGGCGCTTAAAGAAAGAACTTTTACTTGATATATTAGATGCTGTAGC
TGAGTTCATGACTCCACCTCCCAGTACCACGGAAGAAGTTGTACCGGCAT
TTTCTTCTGAAAGTTGAATACTCGAGGCATCGCATGGTATCGGTGCCGTA
GACATGAAGCGGCATGCGCTAAGTATTATCGTTCAACAGTTTCATAAGGT
CGCTCGTCTGTCGGACGCATTTTGTAAACAAAACTTAGAAATGAATGTCA
CAAACCAAAATGTCATCCATAATGCCACCTGAAGACTCATTGTATCTGTT
CTCTGCACCCTTCTATTATGGCTTCACTAATAGCAGACTCCAGGTGACTA
TTGGAGAAACTATTCCTTCACCGCAGTCCTTCTCATCGCTTTTGCGGTAC
ATTTACTACGGCGATGTTACCTATTTTGAAGCTATGTTTCGCTCTTTCTC
GCCACCTGACAACCAAGCTAATATTGTATTGGCTGCTCGGAGTAGCCAAC
TTTGAAAGAAGATTTGAGGAACCTATTGGATTCAGAAGAAGGCAAAAAAT
GGAGTGATTTCAAACTTGTTCTAAACGGGGAAGCTTTTGAGACACACAAG
ATTAGGCGCTTAAAGAAAGAACTTTTACTTGATATATTAGATGCTGTAGC
TGAGTTCATGACTCCACCTCCCAGTACCACGGAAGAAGTTGTACCGGCAT
TTTCTTCTGAAAGTTGAATACTCGAGGCATCGCATGGTATCGGTGCCGTA
GACATGAAGCGGCATGCGCTAAGTATTATCGTTCAACAGTTTCATAAGGT
CGCTCGTCTGTCGGACGCATTTTGTAAACAAAACTTAGAAATGAATGTCA
CAAACCAAAATGTCATCCATAATGCCACCTGAAGACTCATTGTATCTGTT
CTCTGCACCCTTCTATTATGGCTTCACTAATAGCAGACTCCAGGTGACTA
TTGGAGAAACTATTCCTTCACCGCAGTCCTTCTCATCGCTTTTGCGGTAC
ATTTACTACGGCGATGTTACCTATTTTGAAGCTATGTTTCGCTCTTTCTC
GCCACCTGACAACCAAGCTAATATTGTATTGGCTGCTCGGAGTAGCCAAC
TTTGAAAGAAGATTTGAGGAACCTATTGGATTCAGAAGAAGGCAAAAAAT
GGAGTGATTTCAAACTTGTTCTAAACGGGGAAGCTTTTGAGACACACAAG
ATTAGGCGCTTAAAGAAAGAACTTTTACTTGATATATTAGATGCTGTAGC
TGAGTTCATGACTCCACCTCCCAGTACCACGGAAGAAGTTGTACCGGCAT
TTTCTTCTGAAAGTTGAATACTCGAGGCATCGCATGGTATCGGTGCCGTA
GACATGAAGCGGCATGCGCTAAGTATTATCGTTCAACAGTTTCATAAGGT
CGCTCGTCTGTCGGACGCATTTTGTAAACAAAACTTAGAAATGAATGTCA
CAAACCAAAATGTCATCCATAATGCCACCTGAAGACTCATTGTATCTGTT
CTCTGCACCCTTCTATTATGGCTTCACTAATAGCAGACTCCAGGTGACTA
TTGGAGAAACTATTCCTTCACCGCAGTCCTTCTCATCGCTTTTGCGGTAC
ATTTACTACGGCGATGTTACCTATTTTGAAGCTATGTTTCGCTCTTTCTC
GCCACCTGACAACCAAGCTAATATTGTATTGGCTGCTCGGAGTAGCCAAC
TTTGAAAGAAGATTTGAGGAACCTATTGGATTCAGAAGAAGGCAAAAAAT
GGAGTGATTTCAAACTTGTTCTAAACGGGGAAGCTTTTGAGACACACAAG
ATTAGGCGCTTAAAGAAAGAACTTTTACTTGATATATTAGATGCTGTAGC
TGAGTTCATGACTCCACCTCCCAGTACCACGGAAGAAGTTGTACCGGCAT
TTTCTTCTGAAAGTTGAATACTCGAGGCATCGCATGGTATCGGTGCCGTA
GACATGAAGCGGCATGCGCTAAGTATTATCGTTCAACAGTTTCATAAGGT
CGCTCGTCTGTCGGACGCATTTTGTAAACAAAACTTAGAAATGAATGTCA
CAAACCAAAATGTCATCCATAATGCCACCTGAAGACTCATTGTATCTGTT
CTCTGCACCCTTCTATTATGGCTTCACTAATAGCAGACTCCAGGTGACTA
TTGGAGAAACTATTCCTTCACCGCAGTCCTTCTCATCGCTTTTGCGGTAC
ATTTACTACGGCGATGTTACCTATTTTGAAGCTATGTTTCGCTCTTTCTC
GCCACCTGACAACCAAGCTAATATTGTATTGGCTGCTCGGAGTAGCCAAC
TTTGAAAGAAGATTTGAGGAACCTATTGGATTCAGAAGAAGGCAAAAAAT
GGAGTGATTTCAAACTTGTTCTAAACGGGGAAGCTTTTGAGACACACAAG
ATTAGGCGCTTAAAGAAAGAACTTTTACTTGATATATTAGATGCTGTAGC
TGAGTTCATGACTCCACCTCCCAGTACCACGGAAGAAGTTGTACCGGCAT
TTTCTTCTGAAAGTTGAATACTCGAGGCATCGCATGGTATCGGTGCCGTA
GACATGAAGCGGCATGCGCTAAGTATTATCGTTCAACAGTTTCATAAGGT
CGCTCGTCTGTCGGACGCATTTTGTAAACAAAACTTAGAAATGAATGTCA
CAAACCAAAATGTCATCCATAATGCCACCTGAAGACTCATTGTATCTGTT
CTCTGCACCCTTCTATTATGGCTTCACTAATAGCAGACTCCAGGTGACTA
TTGGAGAAACTATTCCTTCACCGCAGTCCTTCTCATCGCTTTTGCGGTAC
ATTTACTACGGCGATGTTACCTATTTTGAAGCTATGTTTCGCTCTTTCTC
GCCACCTGACAACCAAGCTAATATTGTATTGGCTGCTCGGAGTAGCCAAC
TTTGAAAGAAGATTTGAGGAACCTATTGGATTCAGAAGAAGGCAAAAAAT
GGAGTGATTTCAAACTTGTTCTAAACGGGGAAGCTTTTGAGACACACAAG
ATTAGGCGCTTAAAGAAAGAACTTTTACTTGATATATTAGATGCTGTAGC
TGAGTTCATGACTCCACCTCCCAGTACCACGGAAGAAGTTGTACCGGCAT
TTTCTTCTGAAAGTTGAATACTCGAGGCATCGCATGGTATCGGTGCCGTA
GACATGAAGCGGCATGCGCTAAGTATTATCGTTCAACAGTTTCATAAGGT
CGCTCGTCTGTCGGACGCATTTTGTAAACAAAACTTAGAAATGAATGTCA
CAAACCAAAATGTCATCCATAATGCCACCTGAAGACTCATTGTATCTGTT
CTCTGCACCCTTCTATTATGGCTTCACTAATAGCAGACTCCAGGTGACTA
TTGGAGAAACTATTCCTTCACCGCAGTCCTTCTCATCGCTTTTGCGGTAC
ATTTACTACGGCGATGTTACCTATTTTGAAGCTATGTTTCGCTCTTTCTC
GCCACCTGACAACCAAGCTAATATTGTATTGGCTGCTCGGAGTAGCCAAC
TTTGAAAGAAGATTTGAGGAACCTATTGGATTCAGAAGAAGGCAAAAAAT
GGAGTGATTTCAAACTTGTTCTAAACGGGGAAGCTTTTGAGACACACAAG
ATTAGGCGCTTAAAGAAAGAACTTTTACTTGATATATTAGATGCTGTAGC
TGAGTTCATGACTCCACCTCCCAGTACCACGGAAGAAGTTGTACCGGCAT
TTTCTTCTGAAAGTTGAATACTCGAGGCATCGCATGGTATCGGTGCCGTA
GACATGAAGCGGCATGCGCTAAGTATTATCGTTCAACAGTTTCATAAGGT
CGCTCGTCTGTCGGACGCATTTTGTAAACAAAACTTAGAAATGAATGTCA
CAAACCAAAATGTCATCCATAATGCCACCTGAAGACTCATTGTATCTGTT
CTCTGCACCCTTCTATTATGGCTTCACTAATAGCAGACTCCAGGTGACTA
TTGGAGAAACTATTCCTTCACCGCAGTCCTTCTCATCGCTTTTGCGGTAC
ATTTACTACGGCGATGTTACCTATTTTGAAGCTATGTTTCGCTCTTTCTC
GCCACCTGACAACCAAGCTAATATTGTATTGGCTGCTCGGAGTAGCCAAC
TTTGAAAGAAGATTTGAGGAACCTATTGGATTCAGAAGAAGGCAAAAAAT
GGAGTGATTTCAAACTTGTTCTAAACGGGGAAGCTTTTGAGACACACAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025104XLOC_025104Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041092-exon-sc0002700-1575043694:14200..14305TCONS_00041092-exon-sc0002700-1575043694:14200..14305Clytia hemisphaericaexon
TCONS_00041092-exon-sc0002700-1575043694:13519..13541TCONS_00041092-exon-sc0002700-1575043694:13519..13541Clytia hemisphaericaexon
TCONS_00041092-exon-sc0002700-1575043694:12520..12571TCONS_00041092-exon-sc0002700-1575043694:12520..12571Clytia hemisphaericaexon
TCONS_00041092-exon-sc0002700-1575043694:11822..11898TCONS_00041092-exon-sc0002700-1575043694:11822..11898Clytia hemisphaericaexon
TCONS_00041092-exon-sc0002700-1575043694:11533..11605TCONS_00041092-exon-sc0002700-1575043694:11533..11605Clytia hemisphaericaexon
TCONS_00041092-exon-sc0002700-1575043694:10920..10973TCONS_00041092-exon-sc0002700-1575043694:10920..10973Clytia hemisphaericaexon
TCONS_00041092-exon-sc0002700-1575043694:10455..10553TCONS_00041092-exon-sc0002700-1575043694:10455..10553Clytia hemisphaericaexon
TCONS_00041092-exon-sc0002700-1575043694:9214..10399TCONS_00041092-exon-sc0002700-1575043694:9214..10399Clytia hemisphaericaexon
TCONS_00041092-exon-sc0002700-1510915933:14200..14305TCONS_00041092-exon-sc0002700-1510915933:14200..14305Clytia hemisphaericaexon
TCONS_00041092-exon-sc0002700-1510915933:13519..13541TCONS_00041092-exon-sc0002700-1510915933:13519..13541Clytia hemisphaericaexon
TCONS_00041092-exon-sc0002700-1510915933:12520..12571TCONS_00041092-exon-sc0002700-1510915933:12520..12571Clytia hemisphaericaexon
TCONS_00041092-exon-sc0002700-1510915933:11822..11898TCONS_00041092-exon-sc0002700-1510915933:11822..11898Clytia hemisphaericaexon
TCONS_00041092-exon-sc0002700-1510915933:11533..11605TCONS_00041092-exon-sc0002700-1510915933:11533..11605Clytia hemisphaericaexon
TCONS_00041092-exon-sc0002700-1510915933:10920..10973TCONS_00041092-exon-sc0002700-1510915933:10920..10973Clytia hemisphaericaexon
TCONS_00041092-exon-sc0002700-1510915933:10455..10553TCONS_00041092-exon-sc0002700-1510915933:10455..10553Clytia hemisphaericaexon
TCONS_00041092-exon-sc0002700-1510915933:9214..10399TCONS_00041092-exon-sc0002700-1510915933:9214..10399Clytia hemisphaericaexon
TCONS_00041092-exon-sc0002700-1491911889:14200..14305TCONS_00041092-exon-sc0002700-1491911889:14200..14305Clytia hemisphaericaexon
TCONS_00041092-exon-sc0002700-1491911889:13519..13541TCONS_00041092-exon-sc0002700-1491911889:13519..13541Clytia hemisphaericaexon
TCONS_00041092-exon-sc0002700-1491911889:12520..12571TCONS_00041092-exon-sc0002700-1491911889:12520..12571Clytia hemisphaericaexon
TCONS_00041092-exon-sc0002700-1491911889:11822..11898TCONS_00041092-exon-sc0002700-1491911889:11822..11898Clytia hemisphaericaexon
TCONS_00041092-exon-sc0002700-1491911889:11533..11605TCONS_00041092-exon-sc0002700-1491911889:11533..11605Clytia hemisphaericaexon
TCONS_00041092-exon-sc0002700-1491911889:10920..10973TCONS_00041092-exon-sc0002700-1491911889:10920..10973Clytia hemisphaericaexon
TCONS_00041092-exon-sc0002700-1491911889:10455..10553TCONS_00041092-exon-sc0002700-1491911889:10455..10553Clytia hemisphaericaexon
TCONS_00041092-exon-sc0002700-1491911889:9214..10399TCONS_00041092-exon-sc0002700-1491911889:9214..10399Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041092-proteinTCONS_00041092-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002700supercontigsc0002700:9214..14305 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.09896	2.10265	2.38922e-06	1.45703	5.83991	6.83283	3.25879	3.05033	3.64854e-06	8.2454	5.13938	8.91398	1.68548	1.7503	5.49863	6.27631	6.26486	5.83539	2.61772	3.90549	4.9503	4.51095	5.8062	3.20507	15.377	7.29451	5.94386e-06	3.20464	1.93817	3.49222
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000210BTB/POZ_dom
IPR011333SKP1/BTB/POZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
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BLAST of TCONS_00041092 vs. Swiss-Prot (Human)
Match: LZTR1 (Leucine-zipper-like transcriptional regulator 1 OS=Homo sapiens GN=LZTR1 PE=1 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 1.206e-59
Identity = 107/177 (60.45%), Postives = 138/177 (77.97%), Query Frame = 2 
Query:    5 TLKEDLRNLLDSEEGKKWSDFKLVLNGEAFETHKIVLAARSSYFEAMFRSFSPPDNQANVTIGETIPSPQSFSSLLRYIYYGDVTMPPEDSLYLFSAPFYYGFTNSRLQAFCKQNLEMNVTNQNVIHILEASHGIGAVDMKRHALSIIVQQFHKVARLSDIRRLKKELLLDILDAVA 535
            +L +D++  L+   G ++ D  L+L+G     HK +LAARSSYFEAMFRSF P D Q N++IGE +PS Q+F S+LRYIYYG+V MPPEDSLYLF+AP+YYGF N+RLQA+CKQNLEMNVT QNV+ ILEA+    A+DMKRH L IIV QF KV++L  +R L ++LLLDI+D++A
Sbjct:  650 SLIQDMKAYLEGA-GAEFCDITLLLDGHPRPAHKAILAARSSYFEAMFRSFMPEDGQVNISIGEMVPSRQAFESMLRYIYYGEVNMPPEDSLYLFAAPYYYGFYNNRLQAYCKQNLEMNVTVQNVLQILEAADKTQALDMKRHCLHIIVHQFTKVSKLPTLRSLSQQLLLDIIDSLA 825
The following BLAST results are available for this feature:
BLAST of TCONS_00041092 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LZTR11.206e-5960.45Leucine-zipper-like transcriptional regulator 1 OS... [more]
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