TCONS_00041092-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00041092-protein
Unique NameTCONS_00041092-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length199

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00041092-protein ID=TCONS_00041092-protein|Name=TCONS_00041092-protein|organism=Clytia hemisphaerica|type=polypeptide|length=199bp
PTLKEDLRNLLDSEEGKKWSDFKLVLNGEAFETHKIVLAARSSYFEAMFR
SFSPPDNQANVTIGETIPSPQSFSSLLRYIYYGDVTMPPEDSLYLFSAPF
YYGFTNSRLQAFCKQNLEMNVTNQNVIHILEASHGIGAVDMKRHALSIIV
QQFHKVARLSDIRRLKKELLLDILDAVAEFMTPPPSTTEEVVPAFSSES
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_025104XLOC_025104Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00041092TCONS_00041092Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000210BTB/POZ_dom
IPR011333SKP1/BTB/POZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000210BTB/POZ domainSMARTSM00225BTB_4coord: 20..121
e-value: 2.0E-13
score: 60.6
IPR000210BTB/POZ domainPFAMPF00651BTBcoord: 13..116
e-value: 3.5E-18
score: 65.8
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 20..89
score: 20.023
NoneNo IPR availableGENE3D3.30.710.10coord: 2..160
e-value: 3.5E-27
score: 94.6
NoneNo IPR availableCDDcd14821SPOP_C_likecoord: 121..178
e-value: 9.94707E-7
score: 42.5384
IPR011333SKP1/BTB/POZ domainSUPERFAMILY54695POZ domaincoord: 13..114

Blast
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BLAST of TCONS_00041092-protein vs. Swiss-Prot (Human)
Match: LZTR1 (Leucine-zipper-like transcriptional regulator 1 OS=Homo sapiens GN=LZTR1 PE=1 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 3.998e-65
Identity = 107/181 (59.12%), Postives = 140/181 (77.35%), Query Frame = 0 
Query:    2 TLKEDLRNLLDSEEGKKWSDFKLVLNGEAFETHKIVLAARSSYFEAMFRSFSPPDNQANVTIGETIPSPQSFSSLLRYIYYGDVTMPPEDSLYLFSAPFYYGFTNSRLQAFCKQNLEMNVTNQNVIHILEASHGIGAVDMKRHALSIIVQQFHKVARLSDIRRLKKELLLDILDAVAEFMT 182
            +L +D++  L+   G ++ D  L+L+G     HK +LAARSSYFEAMFRSF P D Q N++IGE +PS Q+F S+LRYIYYG+V MPPEDSLYLF+AP+YYGF N+RLQA+CKQNLEMNVT QNV+ ILEA+    A+DMKRH L IIV QF KV++L  +R L ++LLLDI+D++A  ++
Sbjct:  650 SLIQDMKAYLEGA-GAEFCDITLLLDGHPRPAHKAILAARSSYFEAMFRSFMPEDGQVNISIGEMVPSRQAFESMLRYIYYGEVNMPPEDSLYLFAAPYYYGFYNNRLQAYCKQNLEMNVTVQNVLQILEAADKTQALDMKRHCLHIIVHQFTKVSKLPTLRSLSQQLLLDIIDSLASHIS 829
The following BLAST results are available for this feature:
BLAST of TCONS_00041092-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LZTR13.998e-6559.12Leucine-zipper-like transcriptional regulator 1 OS... [more]
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