TCONS_00041009 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041009
Unique NameTCONS_00041009
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length263

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041009 ID=TCONS_00041009|Name=TCONS_00041009|organism=Clytia hemisphaerica|type=transcript|length=263bp
GTAATGACGAAACGTGACTTACCGCTTCTTCAGTTGTTTTATACATTTTG
AACATTTCGGCTGGTAAAGAATTTCAGTTGTTTCTGGTTCTTCACTTTTC
CGTTTCCgagaaaaattcccctaacagtgCTTGTGATATTGGAATTCCCG
CGCTACAATATCATCGGCATCGATTGCATAATAAACTATATTCCTTTTAA
ACTGTTACCTTCTGGAATTCGTCGAATTTAAGCCACTTCTAATTGCAAAT
ATTATATGACTTG
Run BLAST on NCBI

transcript from alignment at sc0002661:11312..11574

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041009 ID=TCONS_00041009|Name=TCONS_00041009|organism=Clytia hemisphaerica|type=transcript|length=263bp|location=Sequence derived from alignment at sc0002661:11312..11574 (Clytia hemisphaerica)
CAAGTCATATAATATTTGCAATTAGAAGTGGCTTAAATTCGACGAATTCC
AGAAGGTAACAGTTTAAAAGGAATATAGTTTATTATGCAATCGATGCCGA
TGATATTGTAGCGCGGGAATTCCAATATCACAAGcactgttaggggaatt
tttctcGGAAACGGAAAAGTGAAGAACCAGAAACAACTGAAATTCTTTAC
CAGCCGAAATGTTCAAAATGTATAAAACAACTGAAGAAGCGGTAAGTCAC
GTTTCGTCATTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025041XLOC_025041Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041009-exon-sc0002661-1491911889:11312..11574TCONS_00041009-exon-sc0002661-1491911889:11312..11574Clytia hemisphaericaexon
TCONS_00041009-exon-sc0002661-1510915933:11312..11574TCONS_00041009-exon-sc0002661-1510915933:11312..11574Clytia hemisphaericaexon
TCONS_00041009-exon-sc0002661-1575043694:11312..11574TCONS_00041009-exon-sc0002661-1575043694:11312..11574Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002661supercontigsc0002661:11312..11574 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.25508	0.611952	1.42107	1.39029	1.69255	1.33748	2.42041	2.26596	0	1.31005	0	0.417939	0	0	0	0	0	0	0	0.698062	0	0	0	0	1.34753	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041009 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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