TCONS_00040968 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040968
Unique NameTCONS_00040968
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1490

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040968 ID=TCONS_00040968|Name=TCONS_00040968|organism=Clytia hemisphaerica|type=transcript|length=1490bp
gtgtggaggagagcagacttctgttgaacttttaaatattggaatacggt
taggaATATTATAAGTTCTCATTTCAACCAAAATAACCTGGTGAAAGgtg
acgttgtttcaacattcatgcGTACGGTCGCCAAACAAGATGATAAAGTT
AAAGTGTCAAGTTCGAAGCTTTTCACTGCTATTAAGAACGGTGATCACAC
TGTTGAGtatcaaattttcgaaaaattggatCCCTCAGCATACAACTTAA
TACTCATACCGATTCATCTTACTGGAAAGATTGGGCATTGGTCAGTTATT
GCCATATATCCAGAGGTGAAATCGATATTCCATCTTGACTCCATCCTGGC
TGATAGAACTGATGTTTTTGATCCGGTAGTTCACCTTTTGAAGAGAATTT
ACCTTAACAGTGGAAAGTCTTTCAAACAATCAAGCTGGAAATTTTATCAG
CCCTGGGACATGCCAAAGCAGTCCGATTCGCACAGTTGTGGGGTGCTTGC
TTGCCTAACTGCCTACAACCTGACAAAAAACACGTCCTTTCTTCCCTATG
ACAACGAAATAACAATGATGCGTTACTGGATAGTAAAAACTTGTCTGGAT
GAAGTTATCACTCTGCCTGAAAGGACTGGCttacagaaaaaaaaagttgc
tcTCCCGGAACCATGTGAACCATTACAACCTATACGTCTTTTGACCAACT
TGATTGCTCTAAACGTGtatggcaaaatttttgaaatagtgTCCGAGAAA
GCTTTCGTGAGTGATGACTCAATTTTATCAGACGCAGACACGGAGGATGT
AAAGGATGACAACGAAGAAGGTGGTAAATGGTCAATAGATGGACCGAAGG
AAGTTGTTTTGGAGGAATTATTGGATAattatttgaagtcaaaatcACAT
ATTAATGAATTAAAATCAATCATTCGGACGCCAGATGACAAAAGTAAGCA
TGACATAGTCCATTATTACACAAAGTATTCCAAGAAAGATGTTGTTACGG
CATGCAATCAGTCGGCATCAAGTTACTGTATTTCGTTTGATGAAAGGTGT
GAAATTGGTTTCCGGCTTCGAGAGATGATGAATTTTTCCAGCATTGGTAT
ATGTATAAAGACTACGGTAGCTGATTTCTACGCCGACGTTGTTTGCCCTG
TATTCCTCTGTTTGTTCTTTCAACATAAACATGGCTGTACCCAATTGGAA
GCGGAAAAACGTGTAACTCAAGGGGAGCTTCCGTGGCATGACAGAATCTT
GCTAGAGAAATCCGAGCACAACATGTATTTAGGAATGACTACTTTCAACC
AAATGACAATACAAgcTATTTCTGGAAAAAATGCCTTACAACAAAGGACG
CATGCTGTCATCAGTCTTCACAACGGGGAAAAGTCAAAACGAATCGGGAA
ACATAGAGGAGATGACCAAAATGAGAATGTTCTTTACATAACGGATCCTC
CTAATTATGCATGCAGAGTCTTGATCCAACTGAAAAACGG
Run BLAST on NCBI

protein sequence of TCONS_00040968-protein

>TCONS_00040968-protein ID=TCONS_00040968-protein|Name=TCONS_00040968-protein|organism=Clytia hemisphaerica|type=polypeptide|length=457bp
MRTVAKQDDKVKVSSSKLFTAIKNGDHTVEYQIFEKLDPSAYNLILIPIH
LTGKIGHWSVIAIYPEVKSIFHLDSILADRTDVFDPVVHLLKRIYLNSGK
SFKQSSWKFYQPWDMPKQSDSHSCGVLACLTAYNLTKNTSFLPYDNEITM
MRYWIVKTCLDEVITLPERTGLQKKKVALPEPCEPLQPIRLLTNLIALNV
YGKIFEIVSEKAFVSDDSILSDADTEDVKDDNEEGGKWSIDGPKEVVLEE
LLDNYLKSKSHINELKSIIRTPDDKSKHDIVHYYTKYSKKDVVTACNQSA
SSYCISFDERCEIGFRLREMMNFSSIGICIKTTVADFYADVVCPVFLCLF
FQHKHGCTQLEAEKRVTQGELPWHDRILLEKSEHNMYLGMTTFNQMTIQA
ISGKNALQQRTHAVISLHNGEKSKRIGKHRGDDQNENVLYITDPPNYACR
VLIQLKN
Run BLAST on NCBI

transcript from alignment at sc0002646:13863..16844-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040968 ID=TCONS_00040968|Name=TCONS_00040968|organism=Clytia hemisphaerica|type=transcript|length=2982bp|location=Sequence derived from alignment at sc0002646:13863..16844- (Clytia hemisphaerica)
GTGTGGAGGAGAGCAGACTTCTGTTGAACTTTTAAATATTGGAATACGGT TAGGAATATTATAAGTTCTCATTTCAACCAAAATAACCTGGTGAAAGGTG ACGTTGTTTCAACATTCATGCGTACGGTCGCCAAACAAGATGATAAAGTT AAAGTGTCAAGTTCGAAGCTTTTCACTGCTATTAAGAACGGTGATCACAC TGTTGAGTATCAAATTTTCGAAAAATTGGATCCCTCAGCATACAACTTAA TACTCATACCGATTCATCTTACTGGAAAGATTGGGCATTGGTCAGTTATT GCCATATATCCAGAGGTGAAATCGATATTCCATCTTGACTCCATCCTGGC TGATAGAACTGATGTTTTTGATCCGGTAGTTCACCTTTTGAAGAGAATTT ACCTTAACAGTGGAAAGTCTTTCAAACAATCAAGCTGGAAATTTTATCAG CCCTGGGACATGCCAAAGCAGTCCGATTCGCACAGTTGTGGGGTGCTTGC TTGCCTAACTGCCTACAACCTGACAAAAAACACGTCCTTTCTTCCCTATG ACAACGAAATAACAATGATGCGTTACTGGATAGTAAAAACTTGTCTGGAT GAAGTTATCACTCTGCCTGAAAGGACTGGCTTACAGAAAAAAAAAGTTGC TCTCCCGGAACCATGTGAACCATTACAACCTATACGTCTTTTGACCAACT TGATTGCTCTAAACGTGTATGGCAAAATTTTTGAAATAGTGTCCGAGAAA GCTTTCGTGAGTGATGACTCAATTTTATCAGACGCAGACACGGAGGATGT AAAGGATGACAACGAAGAAGGTGGTAAATGGTCAATAGATGGACCGAAGG AAGTTGTTTTGGAGGAATTATTGGATAATTATTTGAAGTCAAAATCACAT ATTAATGAATTAAAATCAATCATTCGGACGCCAGATGACAAAAGTAAGCA TGACATAGTCCATTATTACACAAAGTATTCCAAGAAAGATGTTGTTACGG CATGCAATCAGTCGGCATCAAGTTACTGTATTTCGTTTGATGAAAGGTGT GAAATTGGTTTCCGGCTTCGAGAGATGATGAATTTTTCCAGCATTGGTAT ATGTATAAAGACTACGGTAGCTGATTTCTACGCCGACGTTGTTTGCCCTG TATTCCTCTGTTTGTTCTTTCAACATAAACATGGCTGTACCCAATTGGAA GCGGAAAAACGTGTAACTCAAGGGGAGCTTCCGTGGCATGACAGAATCTT GCTAGAGGTAATTTTTCTATTTACAACGTGACAGTATATTTTTTTTCCAG AATCCACCCATTTTAGAGAAAGAAAACAGGCAACCCTCTTAAGTCCCTCA AGCATTTTGCAACAGGATTTTGTGGATCTTGTGTTCGAACTTTAGTAGAA TACTCCCGTCGGTCAACAATGTTTGTATACCTCGTTGTAGCTAAAAAAAT TCAATTCAGGGCTTTTACATGGTGTTACCACTTCTTAACATTTAGAAAAA GATAACCAATAAAAATTATCCTTTTTTCTAACGATTCTTTTCCCACAGAA ATCCGAGCACAACATGTATTTAGGAATGACTACTTTCAACCAAATGACAA TACAAGGTAACAAAAAATTAAACTTTTTTGTGTTAGGAGCATTTGTCATT TTTATTATTATTATTGTTGTTGTTATTACTTATCATTTAAATTTGGACAA TGTGAGCAAAGTTTAAAGGTATCTTGAAATTTTGAGGCTCTGAGATAAAT GAGAAATGCTAGCGACAGGAAATCGTTGTTTTTGAAATTTTAAGAACACA TGGATTGCAAGCCAGTTCATTATTTCCTGTATAATATGTATATATATAAA GCCGAAAGTCGAATTCGGAATCCAGGAATAATTACCCTAAAAGAATATGT ATAACATGTCATTGTTTTGTTGGCTACTTCAGGCAGAAATTTATATTTTG TACGTGGTAAATATTAAAAATTTAAGATACGTAATAGTTAACGGACATTT GCGAGTACAATATGAGAAATATTTTACGAGTTCCGCGATTTTTCCGTACA TTATTTTCCGAGCCTTTAGGCGAGGAAAATATACGGAAAATCCGGAACGA GTGAAATATTTCCATATTGTACGAGCAAATATCTGATAACTGGTTTATCG GTGACCCAAAAAATGCACTTTTTGTGTTGAAAAAAAACGCAGGACACTTT TGTAGCAAAGTGACGTTAGATTGCTGCTACCGCTACAATGCAACAACATC TTTTTGTCAATTTATATTTTTACATGTAAAATATAAGATATATTGTACTC TTTTTAACCAATCAGATTGCAGATATTTTTTGGATCGCCGATAAATGAAT CTACTGTTAATTTAACTTTTTTTAATATATTTTTAGCTATTTCTGGAAAA AATGCCTTACAACAAAGGACGCATGCTGTCATCAGTCTTCACAACGGGGA AAAGTCAAAACGAGTATGTAGATATTCCGCCTTAACGTCGTTACAAAATT TAAAAATCCAAAAAAAAGGCGTTTGTACAGAAAAATAGTACAAGTCAATG ATTTATGATAGCCAGAAGGGTTAGATCCGTGTTCTTGGTAGAAAAATCGG GCAAGTTCTTGGTGGAATTTCCCACCAATGAGGTCGCGTGAAATCGATTA TATTTTTTATCGATTATCGATCTATTGTTCTTGATCTCCCACTTAAATGT GTGATGCAAAAACTGCAAAACAATGAAATGCTGCATCTAATCCATCGGCA CGACATCTAAAAAGTCAGATTTTGCTTCACTTCTTTTTGCTGGAAAAAGC TTATAGTGTTACCAAGCCCTTCTGGCTTTAAACATGTGGTACGTAGACTG ATTTAAACTAACATTTCATTTTGGGTCTTTTTAGATCGGGAAACATAGAG GAGATGACCAAAATGAGAATGTTCTTTACATAACGGATCCTCCTAATTAT GCATGCAGAGTCTTGATCCAACTGAAAAACGG

Coding sequence (CDS) from alignment at sc0002646:13863..16844-

>TCONS_00040968 ID=TCONS_00040968|Name=TCONS_00040968|organism=Clytia hemisphaerica|type=CDS|length=5484bp|location=Sequence derived from alignment at sc0002646:13863..16844- (Clytia hemisphaerica)
ATCGGGAAACATAGAGGAGATGACCAAAATGAGAATGTTCTTTACATAAC
GGATCCTCCTAATTATGCATGCAGAGTCTTGATCCAACTGAAAAACCTAT
TTCTGGAAAAAATGCCTTACAACAAAGGACGCATGCTGTCATCAGTCTTC
ACAACGGGGAAAAGTCAAAACGAAAATCCGAGCACAACATGTATTTAGGA
ATGACTACTTTCAACCAAATGACAATACAAGATGCGTACGGTCGCCAAAC
AAGATGATAAAGTTAAAGTGTCAAGTTCGAAGCTTTTCACTGCTATTAAG
AACGGTGATCACACTGTTGAGTATCAAATTTTCGAAAAATTGGATCCCTC
AGCATACAACTTAATACTCATACCGATTCATCTTACTGGAAAGATTGGGC
ATTGGTCAGTTATTGCCATATATCCAGAGGTGAAATCGATATTCCATCTT
GACTCCATCCTGGCTGATAGAACTGATGTTTTTGATCCGGTAGTTCACCT
TTTGAAGAGAATTTACCTTAACAGTGGAAAGTCTTTCAAACAATCAAGCT
GGAAATTTTATCAGCCCTGGGACATGCCAAAGCAGTCCGATTCGCACAGT
TGTGGGGTGCTTGCTTGCCTAACTGCCTACAACCTGACAAAAAACACGTC
CTTTCTTCCCTATGACAACGAAATAACAATGATGCGTTACTGGATAGTAA
AAACTTGTCTGGATGAAGTTATCACTCTGCCTGAAAGGACTGGCTTACAG
AAAAAAAAAGTTGCTCTCCCGGAACCATGTGAACCATTACAACCTATACG
TCTTTTGACCAACTTGATTGCTCTAAACGTGTATGGCAAAATTTTTGAAA
TAGTGTCCGAGAAAGCTTTCGTGAGTGATGACTCAATTTTATCAGACGCA
GACACGGAGGATGTAAAGGATGACAACGAAGAAGGTGGTAAATGGTCAAT
AGATGGACCGAAGGAAGTTGTTTTGGAGGAATTATTGGATAATTATTTGA
AGTCAAAATCACATATTAATGAATTAAAATCAATCATTCGGACGCCAGAT
GACAAAAGTAAGCATGACATAGTCCATTATTACACAAAGTATTCCAAGAA
AGATGTTGTTACGGCATGCAATCAGTCGGCATCAAGTTACTGTATTTCGT
TTGATGAAAGGTGTGAAATTGGTTTCCGGCTTCGAGAGATGATGAATTTT
TCCAGCATTGGTATATGTATAAAGACTACGGTAGCTGATTTCTACGCCGA
CGTTGTTTGCCCTGTATTCCTCTGTTTGTTCTTTCAACATAAACATGGCT
GTACCCAATTGGAAGCGGAAAAACGTGTAACTCAAGGGGAGCTTCCGTGG
CATGACAGAATCTTGCTAGAGATCGGGAAACATAGAGGAGATGACCAAAA
TGAGAATGTTCTTTACATAACGGATCCTCCTAATTATGCATGCAGAGTCT
TGATCCAACTGAAAAACCTATTTCTGGAAAAAATGCCTTACAACAAAGGA
CGCATGCTGTCATCAGTCTTCACAACGGGGAAAAGTCAAAACGAAAATCC
GAGCACAACATGTATTTAGGAATGACTACTTTCAACCAAATGACAATACA
AGATGCGTACGGTCGCCAAACAAGATGATAAAGTTAAAGTGTCAAGTTCG
AAGCTTTTCACTGCTATTAAGAACGGTGATCACACTGTTGAGTATCAAAT
TTTCGAAAAATTGGATCCCTCAGCATACAACTTAATACTCATACCGATTC
ATCTTACTGGAAAGATTGGGCATTGGTCAGTTATTGCCATATATCCAGAG
GTGAAATCGATATTCCATCTTGACTCCATCCTGGCTGATAGAACTGATGT
TTTTGATCCGGTAGTTCACCTTTTGAAGAGAATTTACCTTAACAGTGGAA
AGTCTTTCAAACAATCAAGCTGGAAATTTTATCAGCCCTGGGACATGCCA
AAGCAGTCCGATTCGCACAGTTGTGGGGTGCTTGCTTGCCTAACTGCCTA
CAACCTGACAAAAAACACGTCCTTTCTTCCCTATGACAACGAAATAACAA
TGATGCGTTACTGGATAGTAAAAACTTGTCTGGATGAAGTTATCACTCTG
CCTGAAAGGACTGGCTTACAGAAAAAAAAAGTTGCTCTCCCGGAACCATG
TGAACCATTACAACCTATACGTCTTTTGACCAACTTGATTGCTCTAAACG
TGTATGGCAAAATTTTTGAAATAGTGTCCGAGAAAGCTTTCGTGAGTGAT
GACTCAATTTTATCAGACGCAGACACGGAGGATGTAAAGGATGACAACGA
AGAAGGTGGTAAATGGTCAATAGATGGACCGAAGGAAGTTGTTTTGGAGG
AATTATTGGATAATTATTTGAAGTCAAAATCACATATTAATGAATTAAAA
TCAATCATTCGGACGCCAGATGACAAAAGTAAGCATGACATAGTCCATTA
TTACACAAAGTATTCCAAGAAAGATGTTGTTACGGCATGCAATCAGTCGG
CATCAAGTTACTGTATTTCGTTTGATGAAAGGTGTGAAATTGGTTTCCGG
CTTCGAGAGATGATGAATTTTTCCAGCATTGGTATATGTATAAAGACTAC
GGTAGCTGATTTCTACGCCGACGTTGTTTGCCCTGTATTCCTCTGTTTGT
TCTTTCAACATAAACATGGCTGTACCCAATTGGAAGCGGAAAAACGTGTA
ACTCAAGGGGAGCTTCCGTGGCATGACAGAATCTTGCTAGAGATCGGGAA
ACATAGAGGAGATGACCAAAATGAGAATGTTCTTTACATAACGGATCCTC
CTAATTATGCATGCAGAGTCTTGATCCAACTGAAAAACCTATTTCTGGAA
AAAATGCCTTACAACAAAGGACGCATGCTGTCATCAGTCTTCACAACGGG
GAAAAGTCAAAACGAAAATCCGAGCACAACATGTATTTAGGAATGACTAC
TTTCAACCAAATGACAATACAAGATGCGTACGGTCGCCAAACAAGATGAT
AAAGTTAAAGTGTCAAGTTCGAAGCTTTTCACTGCTATTAAGAACGGTGA
TCACACTGTTGAGTATCAAATTTTCGAAAAATTGGATCCCTCAGCATACA
ACTTAATACTCATACCGATTCATCTTACTGGAAAGATTGGGCATTGGTCA
GTTATTGCCATATATCCAGAGGTGAAATCGATATTCCATCTTGACTCCAT
CCTGGCTGATAGAACTGATGTTTTTGATCCGGTAGTTCACCTTTTGAAGA
GAATTTACCTTAACAGTGGAAAGTCTTTCAAACAATCAAGCTGGAAATTT
TATCAGCCCTGGGACATGCCAAAGCAGTCCGATTCGCACAGTTGTGGGGT
GCTTGCTTGCCTAACTGCCTACAACCTGACAAAAAACACGTCCTTTCTTC
CCTATGACAACGAAATAACAATGATGCGTTACTGGATAGTAAAAACTTGT
CTGGATGAAGTTATCACTCTGCCTGAAAGGACTGGCTTACAGAAAAAAAA
AGTTGCTCTCCCGGAACCATGTGAACCATTACAACCTATACGTCTTTTGA
CCAACTTGATTGCTCTAAACGTGTATGGCAAAATTTTTGAAATAGTGTCC
GAGAAAGCTTTCGTGAGTGATGACTCAATTTTATCAGACGCAGACACGGA
GGATGTAAAGGATGACAACGAAGAAGGTGGTAAATGGTCAATAGATGGAC
CGAAGGAAGTTGTTTTGGAGGAATTATTGGATAATTATTTGAAGTCAAAA
TCACATATTAATGAATTAAAATCAATCATTCGGACGCCAGATGACAAAAG
TAAGCATGACATAGTCCATTATTACACAAAGTATTCCAAGAAAGATGTTG
TTACGGCATGCAATCAGTCGGCATCAAGTTACTGTATTTCGTTTGATGAA
AGGTGTGAAATTGGTTTCCGGCTTCGAGAGATGATGAATTTTTCCAGCAT
TGGTATATGTATAAAGACTACGGTAGCTGATTTCTACGCCGACGTTGTTT
GCCCTGTATTCCTCTGTTTGTTCTTTCAACATAAACATGGCTGTACCCAA
TTGGAAGCGGAAAAACGTGTAACTCAAGGGGAGCTTCCGTGGCATGACAG
AATCTTGCTAGAGATCGGGAAACATAGAGGAGATGACCAAAATGAGAATG
TTCTTTACATAACGGATCCTCCTAATTATGCATGCAGAGTCTTGATCCAA
CTGAAAAACCTATTTCTGGAAAAAATGCCTTACAACAAAGGACGCATGCT
GTCATCAGTCTTCACAACGGGGAAAAGTCAAAACGAAAATCCGAGCACAA
CATGTATTTAGGAATGACTACTTTCAACCAAATGACAATACAAGATGCGT
ACGGTCGCCAAACAAGATGATAAAGTTAAAGTGTCAAGTTCGAAGCTTTT
CACTGCTATTAAGAACGGTGATCACACTGTTGAGTATCAAATTTTCGAAA
AATTGGATCCCTCAGCATACAACTTAATACTCATACCGATTCATCTTACT
GGAAAGATTGGGCATTGGTCAGTTATTGCCATATATCCAGAGGTGAAATC
GATATTCCATCTTGACTCCATCCTGGCTGATAGAACTGATGTTTTTGATC
CGGTAGTTCACCTTTTGAAGAGAATTTACCTTAACAGTGGAAAGTCTTTC
AAACAATCAAGCTGGAAATTTTATCAGCCCTGGGACATGCCAAAGCAGTC
CGATTCGCACAGTTGTGGGGTGCTTGCTTGCCTAACTGCCTACAACCTGA
CAAAAAACACGTCCTTTCTTCCCTATGACAACGAAATAACAATGATGCGT
TACTGGATAGTAAAAACTTGTCTGGATGAAGTTATCACTCTGCCTGAAAG
GACTGGCTTACAGAAAAAAAAAGTTGCTCTCCCGGAACCATGTGAACCAT
TACAACCTATACGTCTTTTGACCAACTTGATTGCTCTAAACGTGTATGGC
AAAATTTTTGAAATAGTGTCCGAGAAAGCTTTCGTGAGTGATGACTCAAT
TTTATCAGACGCAGACACGGAGGATGTAAAGGATGACAACGAAGAAGGTG
GTAAATGGTCAATAGATGGACCGAAGGAAGTTGTTTTGGAGGAATTATTG
GATAATTATTTGAAGTCAAAATCACATATTAATGAATTAAAATCAATCAT
TCGGACGCCAGATGACAAAAGTAAGCATGACATAGTCCATTATTACACAA
AGTATTCCAAGAAAGATGTTGTTACGGCATGCAATCAGTCGGCATCAAGT
TACTGTATTTCGTTTGATGAAAGGTGTGAAATTGGTTTCCGGCTTCGAGA
GATGATGAATTTTTCCAGCATTGGTATATGTATAAAGACTACGGTAGCTG
ATTTCTACGCCGACGTTGTTTGCCCTGTATTCCTCTGTTTGTTCTTTCAA
CATAAACATGGCTGTACCCAATTGGAAGCGGAAAAACGTGTAACTCAAGG
GGAGCTTCCGTGGCATGACAGAATCTTGCTAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025013XLOC_025013Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040968-exon-sc0002646-1575043694:15588..16844TCONS_00040968-exon-sc0002646-1575043694:15588..16844Clytia hemisphaericaexon
TCONS_00040968-exon-sc0002646-1575043694:15239..15296TCONS_00040968-exon-sc0002646-1575043694:15239..15296Clytia hemisphaericaexon
TCONS_00040968-exon-sc0002646-1575043694:14382..14458TCONS_00040968-exon-sc0002646-1575043694:14382..14458Clytia hemisphaericaexon
TCONS_00040968-exon-sc0002646-1575043694:13863..13960TCONS_00040968-exon-sc0002646-1575043694:13863..13960Clytia hemisphaericaexon
TCONS_00040968-exon-sc0002646-1510915933:15588..16844TCONS_00040968-exon-sc0002646-1510915933:15588..16844Clytia hemisphaericaexon
TCONS_00040968-exon-sc0002646-1510915933:15239..15296TCONS_00040968-exon-sc0002646-1510915933:15239..15296Clytia hemisphaericaexon
TCONS_00040968-exon-sc0002646-1510915933:14382..14458TCONS_00040968-exon-sc0002646-1510915933:14382..14458Clytia hemisphaericaexon
TCONS_00040968-exon-sc0002646-1510915933:13863..13960TCONS_00040968-exon-sc0002646-1510915933:13863..13960Clytia hemisphaericaexon
TCONS_00040968-exon-sc0002646-1491911889:15588..16844TCONS_00040968-exon-sc0002646-1491911889:15588..16844Clytia hemisphaericaexon
TCONS_00040968-exon-sc0002646-1491911889:15239..15296TCONS_00040968-exon-sc0002646-1491911889:15239..15296Clytia hemisphaericaexon
TCONS_00040968-exon-sc0002646-1491911889:14382..14458TCONS_00040968-exon-sc0002646-1491911889:14382..14458Clytia hemisphaericaexon
TCONS_00040968-exon-sc0002646-1491911889:13863..13960TCONS_00040968-exon-sc0002646-1491911889:13863..13960Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040968-proteinTCONS_00040968-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002646supercontigsc0002646:13863..16844 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.4095 2.64672 1.47383 1.01241 1.56865 1.26908 1.21063 0.700027 0.513443 0.520349 0.701478 0.202894 0.165774 0.0573859 0.125811 0.118137 0.228699 0.191789 0.0294408 0.0308076 0.294552 0.11755 0.0952648 0.230959 0.832588 1.00844 0.0759516 0 0.0614794 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003653Peptidase_C48_C
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0008234cysteine-type peptidase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0008234 cysteine-type peptidase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040968 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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