TCONS_00040929 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040929
Unique NameTCONS_00040929
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1561

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040929 ID=TCONS_00040929|Name=TCONS_00040929|organism=Clytia hemisphaerica|type=transcript|length=1561bp
GATGAACTCGTCGAAACACATAATGCGAAAACTACTACGCTTAACAGTGA
GTTTGGGGGTGATCAACCTGTATATGACGGAGCAAGACTTACTGTATCCG
TCAGTATAATGCTTATCCTAACGTTTATCATGAGACATCACCTCACTGGA
GTAGCTGTTGAAGATTTGATTGCACTTATTGAAGCTCATATGATTATACC
AAATTTAAGTAAAACCACCATGAAGTTAATTCgcagattttttgcaaaaa
taagagaaaatgttatttttcattatttttgtgtCAATTGCCTTGCCTAC
ATTGGACTACAAGACAAAGATTGTGAAGTTTGTAAGAAGAAATATAATGG
AAATCCATACTTTGTTGTTATCCCTTTGCTGGATAATTTGCAATCCTTAT
TCAAatAtaaagaatttttgaaagatttgagctacccaatttcaagaaag
aagaagaatccTAAAAATATCGAAGACATCATTGATGGAGAGATTTACAA
AAAGCATTTTGGTTTTGATGGCTTTTTACATGGTACACCCCAAGCTTCca
agaagaaagaaattcatATTTCGCTTCAATGTAACACCGATGGTGTATCT
CTTTTCAAATCGTCCAAAATGGAAATATGGCCCATCTATTACACAATTAA
CGAACTTCACCCAACATTACGATATCGAAGAAAGTATCGATTATTTGCTG
GGCTTTggttttcagacaaaaaaacaaacttcaaaacttttcttAAGCCA
TTTGTTGAAGAACTAAAGGAATTTAGTACATCAGGAAAACTGATAATGAC
AGAAAAAGGTGAGAAACTgttaaaagttcttcttttttctgGTATCTTTG
ATGCACCTGCGAAAAGCATGTTCCAGAATGTTGTACAATTCAATGGGTTA
TACGGCTGCTCTTACTGCTTGGAACCTGGAGAAACCTGTAAAGCTGGTAA
AGGCCACGTTCATGCTTTTCCTTTTAATTTTGACGAAAAATCAGGACATA
CTAAACTAAGCTCTCATAACGATACCATTAGTCATGCAAAGAAAGCCCAG
AAAAGTATTATTGAGACCGGAAACATAGTTCCAGAAAAAGGTATGAAAGG
ATTATCTTGGTCAATGAGCCTTCCATGCTACAATGTTGGCAATGGTCTAG
GTTTGGATTATCTCCATAATACGCTTCTGGGTGTGGTGAAAATGATGATG
CAATTGTGGTTCAACAATAAGTACAAAAATATGCCTTGGTTCATCGGTAA
CCATGTTAATGAAGTCGATAAATGCATTGTACAACTGAGACTTCCTAACC
TAATCAGCAGAATACCAAGAAACATTGAAAAGgatttcaaacattttaaa
gGTTCAGAATTTCGGACATTTTTGTTATTCTATTCCGCTCCAATTTTATA
CAATTTTCTTCCAGATGAGTATTTCCAGCACTATATTCTTTTGGTAGAAT
CAATTTATTTGTTGCTGAAAGATTCTATCTCCCCAATTGATCTTGAAAAT
GCAGATAAGATGTTGCGTCATTTCTGCTGCAAAATTCCTAGATTGTATGG
ATACCGATATC
Run BLAST on NCBI

protein sequence of TCONS_00040929-protein

>TCONS_00040929-protein ID=TCONS_00040929-protein|Name=TCONS_00040929-protein|organism=Clytia hemisphaerica|type=polypeptide|length=520bp
DELVETHNAKTTTLNSEFGGDQPVYDGARLTVSVSIMLILTFIMRHHLTG
VAVEDLIALIEAHMIIPNLSKTTMKLIRRFFAKIRENVIFHYFCVNCLAY
IGLQDKDCEVCKKKYNGNPYFVVIPLLDNLQSLFKYKEFLKDLSYPISRK
KKNPKNIEDIIDGEIYKKHFGFDGFLHGTPQASKKKEIHISLQCNTDGVS
LFKSSKMEIWPIYYTINELHPTLRYRRKYRLFAGLWFSDKKTNFKTFLKP
FVEELKEFSTSGKLIMTEKGEKLLKVLLFSGIFDAPAKSMFQNVVQFNGL
YGCSYCLEPGETCKAGKGHVHAFPFNFDEKSGHTKLSSHNDTISHAKKAQ
KSIIETGNIVPEKGMKGLSWSMSLPCYNVGNGLGLDYLHNTLLGVVKMMM
QLWFNNKYKNMPWFIGNHVNEVDKCIVQLRLPNLISRIPRNIEKDFKHFK
GSEFRTFLLFYSAPILYNFLPDEYFQHYILLVESIYLLLKDSISPIDLEN
ADKMLRHFCCKIPRLYGYRY
Run BLAST on NCBI

transcript from alignment at sc0002626:2954..7789-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040929 ID=TCONS_00040929|Name=TCONS_00040929|organism=Clytia hemisphaerica|type=transcript|length=4836bp|location=Sequence derived from alignment at sc0002626:2954..7789- (Clytia hemisphaerica)
GATGAACTCGTCGAAACACATAATGCGAAAACTACTACGCTTAACAGTGA GTTTGGGGGTGATCAACCTGTATATGACGGAGCAAGACTTACTGTATCCG TCAGTATAATGCTTATCCTAACGTTTATCATGAGGTAATTTGCCCTAAAT TCCTTGCTTATCAATTTCAAGTTATTATGGACTTGTTAACCGGTTTCTTT TTTAAAGCGGGCTACACAGCTTTTTGTGCAATGCAATTGGTTCTTTTCAC ATGACAACGGGCCTAAAACTTCCCAGAGTTGCCTGTTGTTAGGAAAATTT ATTGTGACGTCACTTTTTACAAGGAAAATGAACAGTGCGTTGACATCATA TTCTTTTAATTTTTATTTCTGACGTCAGGAATTATAAAAATGTTTTATCT ATCGCTTGTTTTTTTCGCTTTATTTCGCTATTTTTCCTAGATGAAGCGCT AAAAATTCAATCGGAAGCTAAAGGAAACGGTTAACAAATACAATAAACGA CCGGTTTTGTCGGGCTGTACTGAAAATAATGCAATACCATCAGCTAAAAC GGCAGTTTAGGGACTTTATCAGTTAGTCACACTAGGAAATTAAGCTTTCA GAAAAAACAACATCAGTCATCTACAGGATACATTTCAACAACAAGGATGA GAGTTACCTGAATCAAGTTCGCAAGACAATATTAATTAAAACTTGAAAGT TGAAAACAAAATAAAACGTGCAGCAGCCAAAATCAACCAACCAAAATTTG TCATTCAATTCCCGAGACAGCGCTTTGATTTTTAAGGCCTTGTTTATATG CTAAAGTAAAAACAATTCCGCACATGTAAATGGGTCATTGTTTGAGGTCC GGCAAAATTTCCGGGAGATAGCTTATCTGGCGAAGCGCGGATCTAGGTGG GTTCCGTCTCCCCCGTAGGACTTTTTCTTGGGAAGTTGATCTTCAAATTA GTTTTCAAGGTTGGCTTGGCTTAATTTTTTTTATCTATGGCTCAAATTTT AGGCAATTTCTCAAAGTTTTTGAAAATGTTAATTTCATTAAAAAGCGCCG GGTTATTTTTTTATGAATCCCTTTAGAAGTTTTGCGGCGCATTTTTGCTT GAGAATCAAGTAAACGATATAGCACTTTTCGCAGCGTTAATCTTTGATAT GCATTTTGGCGGGACGCTAGTGTGACTAACTGTTTATTGATCACATTATT GTTTTTTTACACGACTAATGTCAAATTGCTGTGAAGGATTTGGATTATAA ACATTATAAGATCAACTTTATCCTACCGGGAGTAATCCTGGTTGGATACT GGATGATATGATATTTTATAAAAGATATTGTTTTGCTTTTTGCTTAGACA TCACCTCACTGGAGTAGCTGTTGAAGATTTGATTGCACTTATTGAAGCTC ATATGATTATACCAAATTTAAGTAAAACCACCATGAAGTTAATTCGCAGA TTTTTTGCAAAAATAAGAGAAAATGTTATTTTTCATTATTTTTGTGTCAA TTGCCTTGCCTACATTGGACTACAAGACAAAGATTGTGAAGTTTGTAAGA AGAAATATAATGGAAATCCATACTTTGTTGTTATCCCTTTGCTGGATAAT TTGCAATCCTTATTCAAATGTAAGATTTTTTTAAAACTAATATAGCAAAT TTTTAGTAAGTATTGTATTTCGNTTCAAATGTAAGATTTTTTTAAAACTA ATATAGCCAATTTTTAGTAAGTATTATTTCACAGAACTATTGTTGTGGTA TACATACCTGAAAACACGAAAGTTAGTTTCCATGAAAATTAGTTTGTTAA AGTAGACATATTTGTTGAGAGAATTCTTCTTTGAATTTCTTCTATCTAAA GATGGAAAGCTATAATCATGATATAGAGTTGTTGTTTGTTATTTTAGGAC ATTAAAACATCAATTTAGAAATTTTTAAGATTCAAATTCTTGCTAATATT TTTAATCTTAGATAAAGAATTTTTGAAAGATTTGAGCTACCCAATTTCAA GAAAGAAGAAGAATCCTAAAAATATCGAAGACATCATTGATGGAGAGATT TACAAAAAGCATTTTGGTTTTGATGGCTTTTTACATGGTACACCCCAAGC TTNTTTTTAATTTTAGATAAAGAATTTTTGAAAGATTTGAGCTACCCAAT TTCAAGAAAGAAGAAGAATCCTAAAAATATCGAAGACATCATTGATGGAG AGATTTACAAAAAGCATTTTGGTTTTGATGGCTTTTTACATGGTACACCC CAAGCTTCCAAGAAGAAAGAAATTCATATTTCGCTTCAATGTAACACCGA TGGTGTATCTCTTTTCAAATCGTCCAAAATGGAAATATGGCCCATCTATT ACACAATTAACGAACTTCACCCAACATTACGGTAATGATCAAATTTTAGG GGTAAAACTCCTAATATTCAATTGAAATGAAGGGCAAGTTTGTAACAAGA CACACCTTCAAATTAAATCTATTCATTGAAAATGAAGGTTTTCTCAATGA CTAATGATCAAATTTTTATGACATACTCTTTGTAAAGGTGCTTAGCCTTA AAGATAATTTTCTTTATGATATACAGACAAGGCAGATACTTGTGCTGATA CAGCAGATTCAAGAAAATAATGTTTTCGAGTCCCACAAGAACAAGGGAAG AAAATTTTTGTTTTTTTTGTTTCAAAAGGCTGAGTAAGCAAATGATAGAA GATACATACAAACATTATCTTAAAAGCTTTCAGAACCTATTGAATCGTAA GAACCTGTTTGTTAGCAGTTTTTATTTCAAGTTATTATGAGACAATAAAA GCCTGTCTAAAATCTAAATAAGAAACTTTTAATTTACTCCTTAATAATAG GTTTTAAATTGTTTTTTGTATATGGTTCTGTTTTTAGATATCGAAGAAAG TATCGATTATTTGCTGGGCTTTGGTTTTCAGACAAAAAAACAAACTTCAA AACTTTTCTTAAGCCATTTGTTGAAGAACTAAAGGAATTTAGTACATCAG GTAAGTTTGTCACTATTTTTCTTTGCTATTTTTAAATTTCAATAGGTCTA CATGTTTTTTTTTTTATAAGCAAGTGTATGCCCCTTGGTCAGGCTCGTGT ATGCTTAAGTTCTCAAAGCATCCAGGCATAGATTATGCTTATTATATGCT TATGAATCATGCTTATAATTCACCCCGAGTCAAGGTTTAGTGAAATCTTA GAAATTTTGTAAAAATTGTAAAAATTTGTTCTGATTTGGGAGCAGTGGTA GCCGTGGAATGTCTTTTTTTACTTGACCTCAACCAAACCATTTTAAACTG ATAAAAAATGACAACTTGAAAAATATTTCAGGCTGACACATATGCTTATG TTATGCTTAGGAATTATACAAATCTGAGCCTTCATATGCTTATAAAAAAA AAACATTTATCCGCAAAATTCAAAAATTTCATGGGGACTTAATTCGCGGG TGGAACTATTGGGTGGCAATATTTTCACGATTTTGTGACTTTTACTGTCA AATCTTGCATGTTGGTTGTTGTAATACACATTATTTGCACCTCTTTGATG CAAGTAATCATTATTCAAAAAGTATTTATTTGACATATTTGGAGTTTTGT TTATAAATATTTCGCGGATGAGGCCCTCCCTTCTAAATTTTCATTGAGAC TTAATTTTGCTTAAAATTATACGTGGAAATAATAACTTTTCATCAGGAAT TTATGTTTTATTCACCCAGTCAAATATTCTGTTATATACATTTTTAGTAC TAAACCCATTTTTAAAATCATGGGGCTAAGCAATTACTCTTAACACTACA TACAGTACAGAGAGTAATTTGCTCAACAAATTAAATATATCCACAGCACA GAGAAAACTGCCAAATTTGTTGGATTTCAAAGGTTTCCCACAGTTTGAAA AATCCTTAGCTGAAAAGGCTGAAAAGCATTCATCACTTTGCTACAGTATT TGTTGAAAAGTGGTGTTGCAAAGCAGGTGTTGCACATGATGATGACACGC TTAGAGCTGCCTGTGGAAATTTAATGTTCTAATTATACCTCTCCCATCTC TTTTCACAGGAAAACTGATAATGACAGAAAAAGGTGAGAAACTGTTAAAA GTTCTTCTTTTTTCTGGTATCTTTGATGCACCTGCGAAAAGCATGTTCCA GAATGTTGTACAATTCAATGGGTTATACGGCTGCTCTTACTGCTTGGAAC CTGGAGAAACCTGTAAAGCTGGTAAAGGCCACGTTCATGCTTTTCCTTTT AATTTTGACGAAAAATCAGGACATACTAAACTAAGCTCTCATAACGATAC CATTAGTCATGCAAAGAAAGCCCAGAAAAGTATTATTGAGACCGGAAACA TAGTTCCAGAAAAAGGTATGAAAGGATTATCTTGGTCAATGAGCCTTCCA TGCTACAATGTTGGCAATGGTCTAGGTTTGGATTATCTCCATAATACGCT TCTGGGTGTGGTGAAAATGATGATGCAATTGTGGTTCAACAATAAGTACA AAAATATGCCTTGGTTCATCGGTAACCATGTTAATGAAGTCGATAAATGC ATTGTACAACTGAGACTTCCTAACCTAATCAGCAGAATACCAAGAAACAT TGAAAAGGATTTCAAACATTTTAAAGGTTCAGAATTTCGGACATTTTTGT TATTCTATTCCGCTCCAATTTTATACAATTTTCTTCCAGATGAGTATTTC CAGCACTATATTCTTTTGGTAGAATCAATTTATTTGTTGCTGAAAGATTC TATCTCCCCAATTGATCTTGAAAATGCAGATAAGATGTTGCGTCATTTCT GCTGCAAAATTCCTAGATTGTATGGATACCGATATC

Coding sequence (CDS) from alignment at sc0002626:2954..7789-

>TCONS_00040929 ID=TCONS_00040929|Name=TCONS_00040929|organism=Clytia hemisphaerica|type=CDS|length=7800bp|location=Sequence derived from alignment at sc0002626:2954..7789- (Clytia hemisphaerica)
GAAAACTGATAATGACAGAAAAAGGTGAGAAACTGTTAAAAGTTCTTCTT
TTTTCTGGTATCTTTGATGCACCTGCGAAAAGCATGTTCCAGAATGTTGT
ACAATTCAATGGGTTATACGGCTGCTCTTACTGCTTGGAACCTGGAGAAA
CCTGTAAAGCTGGTAAAGGCCACGTTCATGCTTTTCCTTTTAATTTTGAC
GAAAAATCAGGACATACTAAACTAAGCTCTCATAACGATACCATTAGTCA
TGCAAAGAAAGCCCAGAAAAGTATTATTGAGACCGGAAACATAGTTCCAG
AAAAAGGTATGAAAGGATTATCTTGGTCAATGAGCCTTCCATGCTACAAT
GTTGGCAATGGTCTAGGTTTGGATTATCTCCATAATACGCTTCTGGGTGT
GGTGAAAATGATGATGCAATTGTGGTTCAACAATAAGTACAAAAATATGC
CTTGGTTCATCGGTAACCATGTTAATGAAGTCGATAAATGCATTGTACAA
CTGAGACTTCCTAACCTAATCAGCAGAATACCAAGAAACATTGAAAAGGA
TTTCAAACATTTTAAAGGTTCAGAATTTCGGACATTTTTGTTATTCTATT
CCGCTCCAATTTTATACAATTTTCTTCCAGATGAGTATTTCCAGCACTAT
ATTCTTTTGGTAGAATCAATTTATTTGTTGCTGAAAGATTCTATCTCCCC
AATTGATCTTGAAAATGCAGATAAGATGTTGCGTCATTTCTGCTGCAAAA
TTCCTAGATTGTATGGATACCGATATATATCGAAGAAAGTATCGATTATT
TGCTGGGCTTTGGTTTTCAGACAAAAAAACAAACTTCAAAACTTTTCTTA
AGCCATTTGTTGAAGAACTAAAGGAATTTAGTACATCAGATAAAGAATTT
TTGAAAGATTTGAGCTACCCAATTTCAAGAAAGAAGAAGAATCCTAAAAA
TATCGAAGACATCATTGATGGAGAGATTTACAAAAAGCATTTTGGTTTTG
ATGGCTTTTTACATGGTACACCCCAAGCTTCCAAGAAGAAAGAAATTCAT
ATTTCGCTTCAATGTAACACCGATGGTGTATCTCTTTTCAAATCGTCCAA
AATGGAAATATGGCCCATCTATTACACAATTAACGAACTTCACCCAACAT
TACGACATCACCTCACTGGAGTAGCTGTTGAAGATTTGATTGCACTTATT
GAAGCTCATATGATTATACCAAATTTAAGTAAAACCACCATGAAGTTAAT
TCGCAGATTTTTTGCAAAAATAAGAGAAAATGTTATTTTTCATTATTTTT
GTGTCAATTGCCTTGCCTACATTGGACTACAAGACAAAGATTGTGAAGTT
TGTAAGAAGAAATATAATGGAAATCCATACTTTGTTGTTATCCCTTTGCT
GGATAATTTGCAATCCTTATTCAAATGATGAACTCGTCGAAACACATAAT
GCGAAAACTACTACGCTTAACAGTGAGTTTGGGGGTGATCAACCTGTATA
TGACGGAGCAAGACTTACTGTATCCGTCAGTATAATGCTTATCCTAACGT
TTATCATGAGGAAAACTGATAATGACAGAAAAAGGTGAGAAACTGTTAAA
AGTTCTTCTTTTTTCTGGTATCTTTGATGCACCTGCGAAAAGCATGTTCC
AGAATGTTGTACAATTCAATGGGTTATACGGCTGCTCTTACTGCTTGGAA
CCTGGAGAAACCTGTAAAGCTGGTAAAGGCCACGTTCATGCTTTTCCTTT
TAATTTTGACGAAAAATCAGGACATACTAAACTAAGCTCTCATAACGATA
CCATTAGTCATGCAAAGAAAGCCCAGAAAAGTATTATTGAGACCGGAAAC
ATAGTTCCAGAAAAAGGTATGAAAGGATTATCTTGGTCAATGAGCCTTCC
ATGCTACAATGTTGGCAATGGTCTAGGTTTGGATTATCTCCATAATACGC
TTCTGGGTGTGGTGAAAATGATGATGCAATTGTGGTTCAACAATAAGTAC
AAAAATATGCCTTGGTTCATCGGTAACCATGTTAATGAAGTCGATAAATG
CATTGTACAACTGAGACTTCCTAACCTAATCAGCAGAATACCAAGAAACA
TTGAAAAGGATTTCAAACATTTTAAAGGTTCAGAATTTCGGACATTTTTG
TTATTCTATTCCGCTCCAATTTTATACAATTTTCTTCCAGATGAGTATTT
CCAGCACTATATTCTTTTGGTAGAATCAATTTATTTGTTGCTGAAAGATT
CTATCTCCCCAATTGATCTTGAAAATGCAGATAAGATGTTGCGTCATTTC
TGCTGCAAAATTCCTAGATTGTATGGATACCGATATATATCGAAGAAAGT
ATCGATTATTTGCTGGGCTTTGGTTTTCAGACAAAAAAACAAACTTCAAA
ACTTTTCTTAAGCCATTTGTTGAAGAACTAAAGGAATTTAGTACATCAGA
TAAAGAATTTTTGAAAGATTTGAGCTACCCAATTTCAAGAAAGAAGAAGA
ATCCTAAAAATATCGAAGACATCATTGATGGAGAGATTTACAAAAAGCAT
TTTGGTTTTGATGGCTTTTTACATGGTACACCCCAAGCTTCCAAGAAGAA
AGAAATTCATATTTCGCTTCAATGTAACACCGATGGTGTATCTCTTTTCA
AATCGTCCAAAATGGAAATATGGCCCATCTATTACACAATTAACGAACTT
CACCCAACATTACGACATCACCTCACTGGAGTAGCTGTTGAAGATTTGAT
TGCACTTATTGAAGCTCATATGATTATACCAAATTTAAGTAAAACCACCA
TGAAGTTAATTCGCAGATTTTTTGCAAAAATAAGAGAAAATGTTATTTTT
CATTATTTTTGTGTCAATTGCCTTGCCTACATTGGACTACAAGACAAAGA
TTGTGAAGTTTGTAAGAAGAAATATAATGGAAATCCATACTTTGTTGTTA
TCCCTTTGCTGGATAATTTGCAATCCTTATTCAAATGATGAACTCGTCGA
AACACATAATGCGAAAACTACTACGCTTAACAGTGAGTTTGGGGGTGATC
AACCTGTATATGACGGAGCAAGACTTACTGTATCCGTCAGTATAATGCTT
ATCCTAACGTTTATCATGAGGAAAACTGATAATGACAGAAAAAGGTGAGA
AACTGTTAAAAGTTCTTCTTTTTTCTGGTATCTTTGATGCACCTGCGAAA
AGCATGTTCCAGAATGTTGTACAATTCAATGGGTTATACGGCTGCTCTTA
CTGCTTGGAACCTGGAGAAACCTGTAAAGCTGGTAAAGGCCACGTTCATG
CTTTTCCTTTTAATTTTGACGAAAAATCAGGACATACTAAACTAAGCTCT
CATAACGATACCATTAGTCATGCAAAGAAAGCCCAGAAAAGTATTATTGA
GACCGGAAACATAGTTCCAGAAAAAGGTATGAAAGGATTATCTTGGTCAA
TGAGCCTTCCATGCTACAATGTTGGCAATGGTCTAGGTTTGGATTATCTC
CATAATACGCTTCTGGGTGTGGTGAAAATGATGATGCAATTGTGGTTCAA
CAATAAGTACAAAAATATGCCTTGGTTCATCGGTAACCATGTTAATGAAG
TCGATAAATGCATTGTACAACTGAGACTTCCTAACCTAATCAGCAGAATA
CCAAGAAACATTGAAAAGGATTTCAAACATTTTAAAGGTTCAGAATTTCG
GACATTTTTGTTATTCTATTCCGCTCCAATTTTATACAATTTTCTTCCAG
ATGAGTATTTCCAGCACTATATTCTTTTGGTAGAATCAATTTATTTGTTG
CTGAAAGATTCTATCTCCCCAATTGATCTTGAAAATGCAGATAAGATGTT
GCGTCATTTCTGCTGCAAAATTCCTAGATTGTATGGATACCGATATATAT
CGAAGAAAGTATCGATTATTTGCTGGGCTTTGGTTTTCAGACAAAAAAAC
AAACTTCAAAACTTTTCTTAAGCCATTTGTTGAAGAACTAAAGGAATTTA
GTACATCAGATAAAGAATTTTTGAAAGATTTGAGCTACCCAATTTCAAGA
AAGAAGAAGAATCCTAAAAATATCGAAGACATCATTGATGGAGAGATTTA
CAAAAAGCATTTTGGTTTTGATGGCTTTTTACATGGTACACCCCAAGCTT
CCAAGAAGAAAGAAATTCATATTTCGCTTCAATGTAACACCGATGGTGTA
TCTCTTTTCAAATCGTCCAAAATGGAAATATGGCCCATCTATTACACAAT
TAACGAACTTCACCCAACATTACGACATCACCTCACTGGAGTAGCTGTTG
AAGATTTGATTGCACTTATTGAAGCTCATATGATTATACCAAATTTAAGT
AAAACCACCATGAAGTTAATTCGCAGATTTTTTGCAAAAATAAGAGAAAA
TGTTATTTTTCATTATTTTTGTGTCAATTGCCTTGCCTACATTGGACTAC
AAGACAAAGATTGTGAAGTTTGTAAGAAGAAATATAATGGAAATCCATAC
TTTGTTGTTATCCCTTTGCTGGATAATTTGCAATCCTTATTCAAATGATG
AACTCGTCGAAACACATAATGCGAAAACTACTACGCTTAACAGTGAGTTT
GGGGGTGATCAACCTGTATATGACGGAGCAAGACTTACTGTATCCGTCAG
TATAATGCTTATCCTAACGTTTATCATGAGGAAAACTGATAATGACAGAA
AAAGGTGAGAAACTGTTAAAAGTTCTTCTTTTTTCTGGTATCTTTGATGC
ACCTGCGAAAAGCATGTTCCAGAATGTTGTACAATTCAATGGGTTATACG
GCTGCTCTTACTGCTTGGAACCTGGAGAAACCTGTAAAGCTGGTAAAGGC
CACGTTCATGCTTTTCCTTTTAATTTTGACGAAAAATCAGGACATACTAA
ACTAAGCTCTCATAACGATACCATTAGTCATGCAAAGAAAGCCCAGAAAA
GTATTATTGAGACCGGAAACATAGTTCCAGAAAAAGGTATGAAAGGATTA
TCTTGGTCAATGAGCCTTCCATGCTACAATGTTGGCAATGGTCTAGGTTT
GGATTATCTCCATAATACGCTTCTGGGTGTGGTGAAAATGATGATGCAAT
TGTGGTTCAACAATAAGTACAAAAATATGCCTTGGTTCATCGGTAACCAT
GTTAATGAAGTCGATAAATGCATTGTACAACTGAGACTTCCTAACCTAAT
CAGCAGAATACCAAGAAACATTGAAAAGGATTTCAAACATTTTAAAGGTT
CAGAATTTCGGACATTTTTGTTATTCTATTCCGCTCCAATTTTATACAAT
TTTCTTCCAGATGAGTATTTCCAGCACTATATTCTTTTGGTAGAATCAAT
TTATTTGTTGCTGAAAGATTCTATCTCCCCAATTGATCTTGAAAATGCAG
ATAAGATGTTGCGTCATTTCTGCTGCAAAATTCCTAGATTGTATGGATAC
CGATATATATCGAAGAAAGTATCGATTATTTGCTGGGCTTTGGTTTTCAG
ACAAAAAAACAAACTTCAAAACTTTTCTTAAGCCATTTGTTGAAGAACTA
AAGGAATTTAGTACATCAGATAAAGAATTTTTGAAAGATTTGAGCTACCC
AATTTCAAGAAAGAAGAAGAATCCTAAAAATATCGAAGACATCATTGATG
GAGAGATTTACAAAAAGCATTTTGGTTTTGATGGCTTTTTACATGGTACA
CCCCAAGCTTCCAAGAAGAAAGAAATTCATATTTCGCTTCAATGTAACAC
CGATGGTGTATCTCTTTTCAAATCGTCCAAAATGGAAATATGGCCCATCT
ATTACACAATTAACGAACTTCACCCAACATTACGACATCACCTCACTGGA
GTAGCTGTTGAAGATTTGATTGCACTTATTGAAGCTCATATGATTATACC
AAATTTAAGTAAAACCACCATGAAGTTAATTCGCAGATTTTTTGCAAAAA
TAAGAGAAAATGTTATTTTTCATTATTTTTGTGTCAATTGCCTTGCCTAC
ATTGGACTACAAGACAAAGATTGTGAAGTTTGTAAGAAGAAATATAATGG
AAATCCATACTTTGTTGTTATCCCTTTGCTGGATAATTTGCAATCCTTAT
TCAAATGATGAACTCGTCGAAACACATAATGCGAAAACTACTACGCTTAA
CAGTGAGTTTGGGGGTGATCAACCTGTATATGACGGAGCAAGACTTACTG
TATCCGTCAGTATAATGCTTATCCTAACGTTTATCATGAGGAAAACTGAT
AATGACAGAAAAAGGTGAGAAACTGTTAAAAGTTCTTCTTTTTTCTGGTA
TCTTTGATGCACCTGCGAAAAGCATGTTCCAGAATGTTGTACAATTCAAT
GGGTTATACGGCTGCTCTTACTGCTTGGAACCTGGAGAAACCTGTAAAGC
TGGTAAAGGCCACGTTCATGCTTTTCCTTTTAATTTTGACGAAAAATCAG
GACATACTAAACTAAGCTCTCATAACGATACCATTAGTCATGCAAAGAAA
GCCCAGAAAAGTATTATTGAGACCGGAAACATAGTTCCAGAAAAAGGTAT
GAAAGGATTATCTTGGTCAATGAGCCTTCCATGCTACAATGTTGGCAATG
GTCTAGGTTTGGATTATCTCCATAATACGCTTCTGGGTGTGGTGAAAATG
ATGATGCAATTGTGGTTCAACAATAAGTACAAAAATATGCCTTGGTTCAT
CGGTAACCATGTTAATGAAGTCGATAAATGCATTGTACAACTGAGACTTC
CTAACCTAATCAGCAGAATACCAAGAAACATTGAAAAGGATTTCAAACAT
TTTAAAGGTTCAGAATTTCGGACATTTTTGTTATTCTATTCCGCTCCAAT
TTTATACAATTTTCTTCCAGATGAGTATTTCCAGCACTATATTCTTTTGG
TAGAATCAATTTATTTGTTGCTGAAAGATTCTATCTCCCCAATTGATCTT
GAAAATGCAGATAAGATGTTGCGTCATTTCTGCTGCAAAATTCCTAGATT
GTATGGATACCGATATATATCGAAGAAAGTATCGATTATTTGCTGGGCTT
TGGTTTTCAGACAAAAAAACAAACTTCAAAACTTTTCTTAAGCCATTTGT
TGAAGAACTAAAGGAATTTAGTACATCAGATAAAGAATTTTTGAAAGATT
TGAGCTACCCAATTTCAAGAAAGAAGAAGAATCCTAAAAATATCGAAGAC
ATCATTGATGGAGAGATTTACAAAAAGCATTTTGGTTTTGATGGCTTTTT
ACATGGTACACCCCAAGCTTCCAAGAAGAAAGAAATTCATATTTCGCTTC
AATGTAACACCGATGGTGTATCTCTTTTCAAATCGTCCAAAATGGAAATA
TGGCCCATCTATTACACAATTAACGAACTTCACCCAACATTACGACATCA
CCTCACTGGAGTAGCTGTTGAAGATTTGATTGCACTTATTGAAGCTCATA
TGATTATACCAAATTTAAGTAAAACCACCATGAAGTTAATTCGCAGATTT
TTTGCAAAAATAAGAGAAAATGTTATTTTTCATTATTTTTGTGTCAATTG
CCTTGCCTACATTGGACTACAAGACAAAGATTGTGAAGTTTGTAAGAAGA
AATATAATGGAAATCCATACTTTGTTGTTATCCCTTTGCTGGATAATTTG
CAATCCTTATTCAAATGATGAACTCGTCGAAACACATAATGCGAAAACTA
CTACGCTTAACAGTGAGTTTGGGGGTGATCAACCTGTATATGACGGAGCA
AGACTTACTGTATCCGTCAGTATAATGCTTATCCTAACGTTTATCATGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024980XLOC_024980Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040929-proteinTCONS_00040929-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040929-exon-sc0002626-1575043694:7656..7789TCONS_00040929-exon-sc0002626-1575043694:7656..7789Clytia hemisphaericaexon
TCONS_00040929-exon-sc0002626-1575043694:6171..6442TCONS_00040929-exon-sc0002626-1575043694:6171..6442Clytia hemisphaericaexon
TCONS_00040929-exon-sc0002626-1575043694:5409..5673TCONS_00040929-exon-sc0002626-1575043694:5409..5673Clytia hemisphaericaexon
TCONS_00040929-exon-sc0002626-1575043694:4790..4902TCONS_00040929-exon-sc0002626-1575043694:4790..4902Clytia hemisphaericaexon
TCONS_00040929-exon-sc0002626-1575043694:2954..3730TCONS_00040929-exon-sc0002626-1575043694:2954..3730Clytia hemisphaericaexon
TCONS_00040929-exon-sc0002626-1510915933:7656..7789TCONS_00040929-exon-sc0002626-1510915933:7656..7789Clytia hemisphaericaexon
TCONS_00040929-exon-sc0002626-1510915933:6171..6442TCONS_00040929-exon-sc0002626-1510915933:6171..6442Clytia hemisphaericaexon
TCONS_00040929-exon-sc0002626-1510915933:5409..5673TCONS_00040929-exon-sc0002626-1510915933:5409..5673Clytia hemisphaericaexon
TCONS_00040929-exon-sc0002626-1510915933:4790..4902TCONS_00040929-exon-sc0002626-1510915933:4790..4902Clytia hemisphaericaexon
TCONS_00040929-exon-sc0002626-1510915933:2954..3730TCONS_00040929-exon-sc0002626-1510915933:2954..3730Clytia hemisphaericaexon
TCONS_00040929-exon-sc0002626-1491911889:7656..7789TCONS_00040929-exon-sc0002626-1491911889:7656..7789Clytia hemisphaericaexon
TCONS_00040929-exon-sc0002626-1491911889:6171..6442TCONS_00040929-exon-sc0002626-1491911889:6171..6442Clytia hemisphaericaexon
TCONS_00040929-exon-sc0002626-1491911889:5409..5673TCONS_00040929-exon-sc0002626-1491911889:5409..5673Clytia hemisphaericaexon
TCONS_00040929-exon-sc0002626-1491911889:4790..4902TCONS_00040929-exon-sc0002626-1491911889:4790..4902Clytia hemisphaericaexon
TCONS_00040929-exon-sc0002626-1491911889:2954..3730TCONS_00040929-exon-sc0002626-1491911889:2954..3730Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002626supercontigsc0002626:2954..7789 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.393614 0.588548 0.159532 0.145339 1.7502 1.17447 1.34947 1.68961 0.530706 0.914359 1.01025 0.291703 0.541013 0.471226 1.05711 1.24726 1.35923 0.827823 0.89263 0.904883 0.761137 0.594009 0.752183 1.14664 0 0 2.12291 1.09374 0.590254 0.890225
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004242Transposase_21
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040929 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top