XLOC_024980 (gene) - C. hemisphaerica

Overview
NameXLOC_024980
Unique NameXLOC_024980
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002626:2954..7789-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024980 ID=XLOC_024980|Name=XLOC_024980|organism=Clytia hemisphaerica|type=gene|length=4836bp|location=Sequence derived from alignment at sc0002626:2954..7789- (Clytia hemisphaerica)
GATGAACTCGTCGAAACACATAATGCGAAAACTACTACGCTTAACAGTGA GTTTGGGGGTGATCAACCTGTATATGACGGAGCAAGACTTACTGTATCCG TCAGTATAATGCTTATCCTAACGTTTATCATGAGGTAATTTGCCCTAAAT TCCTTGCTTATCAATTTCAAGTTATTATGGACTTGTTAACCGGTTTCTTT TTTAAAGCGGGCTACACAGCTTTTTGTGCAATGCAATTGGTTCTTTTCAC ATGACAACGGGCCTAAAACTTCCCAGAGTTGCCTGTTGTTAGGAAAATTT ATTGTGACGTCACTTTTTACAAGGAAAATGAACAGTGCGTTGACATCATA TTCTTTTAATTTTTATTTCTGACGTCAGGAATTATAAAAATGTTTTATCT ATCGCTTGTTTTTTTCGCTTTATTTCGCTATTTTTCCTAGATGAAGCGCT AAAAATTCAATCGGAAGCTAAAGGAAACGGTTAACAAATACAATAAACGA CCGGTTTTGTCGGGCTGTACTGAAAATAATGCAATACCATCAGCTAAAAC GGCAGTTTAGGGACTTTATCAGTTAGTCACACTAGGAAATTAAGCTTTCA GAAAAAACAACATCAGTCATCTACAGGATACATTTCAACAACAAGGATGA GAGTTACCTGAATCAAGTTCGCAAGACAATATTAATTAAAACTTGAAAGT TGAAAACAAAATAAAACGTGCAGCAGCCAAAATCAACCAACCAAAATTTG TCATTCAATTCCCGAGACAGCGCTTTGATTTTTAAGGCCTTGTTTATATG CTAAAGTAAAAACAATTCCGCACATGTAAATGGGTCATTGTTTGAGGTCC GGCAAAATTTCCGGGAGATAGCTTATCTGGCGAAGCGCGGATCTAGGTGG GTTCCGTCTCCCCCGTAGGACTTTTTCTTGGGAAGTTGATCTTCAAATTA GTTTTCAAGGTTGGCTTGGCTTAATTTTTTTTATCTATGGCTCAAATTTT AGGCAATTTCTCAAAGTTTTTGAAAATGTTAATTTCATTAAAAAGCGCCG GGTTATTTTTTTATGAATCCCTTTAGAAGTTTTGCGGCGCATTTTTGCTT GAGAATCAAGTAAACGATATAGCACTTTTCGCAGCGTTAATCTTTGATAT GCATTTTGGCGGGACGCTAGTGTGACTAACTGTTTATTGATCACATTATT GTTTTTTTACACGACTAATGTCAAATTGCTGTGAAGGATTTGGATTATAA ACATTATAAGATCAACTTTATCCTACCGGGAGTAATCCTGGTTGGATACT GGATGATATGATATTTTATAAAAGATATTGTTTTGCTTTTTGCTTAGACA TCACCTCACTGGAGTAGCTGTTGAAGATTTGATTGCACTTATTGAAGCTC ATATGATTATACCAAATTTAAGTAAAACCACCATGAAGTTAATTCGCAGA TTTTTTGCAAAAATAAGAGAAAATGTTATTTTTCATTATTTTTGTGTCAA TTGCCTTGCCTACATTGGACTACAAGACAAAGATTGTGAAGTTTGTAAGA AGAAATATAATGGAAATCCATACTTTGTTGTTATCCCTTTGCTGGATAAT TTGCAATCCTTATTCAAATGTAAGATTTTTTTAAAACTAATATAGCAAAT TTTTAGTAAGTATTGTATTTCGNTTCAAATGTAAGATTTTTTTAAAACTA ATATAGCCAATTTTTAGTAAGTATTATTTCACAGAACTATTGTTGTGGTA TACATACCTGAAAACACGAAAGTTAGTTTCCATGAAAATTAGTTTGTTAA AGTAGACATATTTGTTGAGAGAATTCTTCTTTGAATTTCTTCTATCTAAA GATGGAAAGCTATAATCATGATATAGAGTTGTTGTTTGTTATTTTAGGAC ATTAAAACATCAATTTAGAAATTTTTAAGATTCAAATTCTTGCTAATATT TTTAATCTTAGATAAAGAATTTTTGAAAGATTTGAGCTACCCAATTTCAA GAAAGAAGAAGAATCCTAAAAATATCGAAGACATCATTGATGGAGAGATT TACAAAAAGCATTTTGGTTTTGATGGCTTTTTACATGGTACACCCCAAGC TTNTTTTTAATTTTAGATAAAGAATTTTTGAAAGATTTGAGCTACCCAAT TTCAAGAAAGAAGAAGAATCCTAAAAATATCGAAGACATCATTGATGGAG AGATTTACAAAAAGCATTTTGGTTTTGATGGCTTTTTACATGGTACACCC CAAGCTTCCAAGAAGAAAGAAATTCATATTTCGCTTCAATGTAACACCGA TGGTGTATCTCTTTTCAAATCGTCCAAAATGGAAATATGGCCCATCTATT ACACAATTAACGAACTTCACCCAACATTACGGTAATGATCAAATTTTAGG GGTAAAACTCCTAATATTCAATTGAAATGAAGGGCAAGTTTGTAACAAGA CACACCTTCAAATTAAATCTATTCATTGAAAATGAAGGTTTTCTCAATGA CTAATGATCAAATTTTTATGACATACTCTTTGTAAAGGTGCTTAGCCTTA AAGATAATTTTCTTTATGATATACAGACAAGGCAGATACTTGTGCTGATA CAGCAGATTCAAGAAAATAATGTTTTCGAGTCCCACAAGAACAAGGGAAG AAAATTTTTGTTTTTTTTGTTTCAAAAGGCTGAGTAAGCAAATGATAGAA GATACATACAAACATTATCTTAAAAGCTTTCAGAACCTATTGAATCGTAA GAACCTGTTTGTTAGCAGTTTTTATTTCAAGTTATTATGAGACAATAAAA GCCTGTCTAAAATCTAAATAAGAAACTTTTAATTTACTCCTTAATAATAG GTTTTAAATTGTTTTTTGTATATGGTTCTGTTTTTAGATATCGAAGAAAG TATCGATTATTTGCTGGGCTTTGGTTTTCAGACAAAAAAACAAACTTCAA AACTTTTCTTAAGCCATTTGTTGAAGAACTAAAGGAATTTAGTACATCAG GTAAGTTTGTCACTATTTTTCTTTGCTATTTTTAAATTTCAATAGGTCTA CATGTTTTTTTTTTTATAAGCAAGTGTATGCCCCTTGGTCAGGCTCGTGT ATGCTTAAGTTCTCAAAGCATCCAGGCATAGATTATGCTTATTATATGCT TATGAATCATGCTTATAATTCACCCCGAGTCAAGGTTTAGTGAAATCTTA GAAATTTTGTAAAAATTGTAAAAATTTGTTCTGATTTGGGAGCAGTGGTA GCCGTGGAATGTCTTTTTTTACTTGACCTCAACCAAACCATTTTAAACTG ATAAAAAATGACAACTTGAAAAATATTTCAGGCTGACACATATGCTTATG TTATGCTTAGGAATTATACAAATCTGAGCCTTCATATGCTTATAAAAAAA AAACATTTATCCGCAAAATTCAAAAATTTCATGGGGACTTAATTCGCGGG TGGAACTATTGGGTGGCAATATTTTCACGATTTTGTGACTTTTACTGTCA AATCTTGCATGTTGGTTGTTGTAATACACATTATTTGCACCTCTTTGATG CAAGTAATCATTATTCAAAAAGTATTTATTTGACATATTTGGAGTTTTGT TTATAAATATTTCGCGGATGAGGCCCTCCCTTCTAAATTTTCATTGAGAC TTAATTTTGCTTAAAATTATACGTGGAAATAATAACTTTTCATCAGGAAT TTATGTTTTATTCACCCAGTCAAATATTCTGTTATATACATTTTTAGTAC TAAACCCATTTTTAAAATCATGGGGCTAAGCAATTACTCTTAACACTACA TACAGTACAGAGAGTAATTTGCTCAACAAATTAAATATATCCACAGCACA GAGAAAACTGCCAAATTTGTTGGATTTCAAAGGTTTCCCACAGTTTGAAA AATCCTTAGCTGAAAAGGCTGAAAAGCATTCATCACTTTGCTACAGTATT TGTTGAAAAGTGGTGTTGCAAAGCAGGTGTTGCACATGATGATGACACGC TTAGAGCTGCCTGTGGAAATTTAATGTTCTAATTATACCTCTCCCATCTC TTTTCACAGGAAAACTGATAATGACAGAAAAAGGTGAGAAACTGTTAAAA GTTCTTCTTTTTTCTGGTATCTTTGATGCACCTGCGAAAAGCATGTTCCA GAATGTTGTACAATTCAATGGGTTATACGGCTGCTCTTACTGCTTGGAAC CTGGAGAAACCTGTAAAGCTGGTAAAGGCCACGTTCATGCTTTTCCTTTT AATTTTGACGAAAAATCAGGACATACTAAACTAAGCTCTCATAACGATAC CATTAGTCATGCAAAGAAAGCCCAGAAAAGTATTATTGAGACCGGAAACA TAGTTCCAGAAAAAGGTATGAAAGGATTATCTTGGTCAATGAGCCTTCCA TGCTACAATGTTGGCAATGGTCTAGGTTTGGATTATCTCCATAATACGCT TCTGGGTGTGGTGAAAATGATGATGCAATTGTGGTTCAACAATAAGTACA AAAATATGCCTTGGTTCATCGGTAACCATGTTAATGAAGTCGATAAATGC ATTGTACAACTGAGACTTCCTAACCTAATCAGCAGAATACCAAGAAACAT TGAAAAGGATTTCAAACATTTTAAAGGTTCAGAATTTCGGACATTTTTGT TATTCTATTCCGCTCCAATTTTATACAATTTTCTTCCAGATGAGTATTTC CAGCACTATATTCTTTTGGTAGAATCAATTTATTTGTTGCTGAAAGATTC TATCTCCCCAATTGATCTTGAAAATGCAGATAAGATGTTGCGTCATTTCT GCTGCAAAATTCCTAGATTGTATGGATACCGATATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00040929TCONS_00040929Clytia hemisphaericatranscript
TCONS_00040928TCONS_00040928Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00040929-proteinTCONS_00040929-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002626supercontigsc0002626:2954..7789 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.39 0.59 0.16 0.15 1.75 1.17 1.35 1.69 0.53 1.14 1.01 0.56 0.54 0.47 1.06 1.25 1.36 0.83 0.89 0.9 0.76 0.59 0.75 1.15 0 0.08 2.12 1.09 0.59 0.89