TCONS_00040780 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040780
Unique NameTCONS_00040780
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4083

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040780 ID=TCONS_00040780|Name=TCONS_00040780|organism=Clytia hemisphaerica|type=transcript|length=4083bp
AATTTTGAAGCAATGTGTCTACGTGATCGCTCTCTGGAAACATATTCCCT
AGGAATAAGAATTTTCAACGCCTGTTTCAAATGAACACTGCTCAATTTCC
CTCTAATTAACCTCGTTAAATACCACCTTTGATCCAAACGCTCTTCTTCT
TTGACTTCGAGCTCTCCATCTGAAAGTTCAAGTTCTACATCTTGAGCCTT
AACTTCAGTTTTCTCAAGATCACAATTCTTTTGTGAAGTCTCCTTGCTTC
TAACAGAGACCACCCTTGCTTCTTCACTGGATGATTTCTCACCTGCTTTA
CAACTCAATGCTGGGGCCTTCTTGCTCTCAACATAGACTTTCTTTGTTTC
CTCTTCTGACAATTTCTCATCTGCAAAAATCTCACAACCAGAGCATGATG
GCTCAATACTTTTTGCGGAGGCTCTCTCAATAATTGATTCATCTGCAGAA
GGTTCATTGGGTTCCATTTCAAGCTTATCATCCTGGTCAGCTTTCTTTTG
CTCATCCACATCTTCAGGGTTTAAATAGTCAGTtattttcttctccttct
tttcTGCTTTGGAAGTTAGTAATTCACttggatttaaattctttagcTTG
TCTATCGCATAACCGTGATTTAAAGCCCCATCAAATTCACTCTCACAGGG
TACGCCATTGTCAAAAGATtgtaaaaatccaaaatctccATTTTCCTTGA
CAAAGTTAGCACCTTCAGGACATTGATTTTTGAACAATTCAATTCCCTTT
CTTACTCCTGATCGAAAGGCTTTCCGTTGAGCATCTCTAAACAGTTCATA
TGAATCAGGAAATTTGTAGTTTGAATTTGAATCGACATTTTTCCATTTAT
GTGACAATCGTCTTCTGTTAGTAGACTGATGTTTTTTACCACCCCTAGCA
AGAATACTATCCTCTGAAAATTGATTTGCCTGAACTTTAGATAATCTACT
TGAAATGTCAGATAAAGTGGGCTGAGCATCCAAAGATTGGAGTTTATTAG
TTTTCCCCTGAAGTTCACTGATAATCCTTTCTGTGGTTTTGGTACCACAT
TTAAATGGAGAAAGAGCAGAGGGGCCAAGATGAttaaaatgagcaaaaat
tgCTAGCATGTGGCAAGTGGCAGCAGTAAATAAGATTTCAGCTGTCTTAT
AACACCCATATGTAAGAAACATTCCtctttttgatggattttttgcaGCA
CCACTTGTGGCATTCaacctttttttctttaattcaagAATCCTTCGCCA
AATTCGAAAAATTGTTATTCCTTTGGAAATATTTTCCTGCATCAAGATTG
GGTTTGAACATGGGTTTAAAAACGGGTCAAAAAGTGCAACAACACCTCTG
ATGTATAAGACAGTACCAGCAGATCCAGGTACATTTTCTTGGAGCAAATC
AGCAACCGATGAGGTGAATACCTTCAAAGCAGCATCACTATTCTGGTCTA
AATAGCGAGCAAACAAAAGATCATTGTTGCTGAAGTCACAAGAAACACCG
CTATCGTCAGCTATTTGCTTTAACTCTTTCAAATGATTGATTGTGACAAC
ATAGGAGCCTGCCTTTGATGGAAAGATGTTTAAGTCCAATGTTGTGTATT
TCAGACACTTGAGGAACAAACGTAGATTATGATCGAAGTCTAAATAAGCA
ATGAATGGAAGGGGTCCGAAATAAGGTGCTGCAAACTTACTCTCTCCTAC
ACCAAGTGTTAAATACTTTACACCAACATCAATGATTTTAGACTGCGGTG
TCATTAGTGCAACAGCAGCCGCAAGCTGAAAGCCCGCGCTGTCTGTACTG
TGGCCTAATAGATTAACCGGATTCTCTCTCAAAATCCCATCGTTATCAAG
GAAACAATGTTTTCTGACAACATCCCAAATTTTAAGAAGGTTAGGGGCAC
AGTAGCCTGAATTTGCAGTTGGCCAAAACATGAACACTAATGGTTTTGAT
AAGGCACCTGATGCAGCCACAAAGTTATGAATAGCTGTGTCTTTGGCAAA
AGTATTGGAAGACCTCATTTCCTTTATAAAACCCTTCAACGCAGAGAACT
CATCCacagaattttcttttgttataacaTTTTTCAAGAATATACGCGAA
TCTTCCCATTTGCTAATATCAACATCCCAACATTTTCCAATCAGCTCAAT
TTCATTGTTCTTTCCAACTACAGGAGATAAAAAACGCAGTGTCCTTGCCT
CATCGGACGCTTCTACAACTGGGCCACCACCATAAAGCTCTATAGCTTTA
TCAAAAACCTCCTCGTTCAAGCCAACATGCAATTTGTTTTCTTTGGAATG
TTGCACCACACAAGTTTTGCTGGGTAAACAAAATAACTCCTTAAGGTCAC
TGTAGCTAGTCACTCCTAGTTTATTCTTGTACAGGACGGCAATATCTTTA
AGNCAAGTATTGCAAGAAAATTTAAGACTATTGGTATAGCTGAGCAAAGA
AAACTGCGGAAAATGAATATTAGGAGCAAGGTCAACTATTGTCTTGTGCG
CTGTGTTTCCCGTTAAAATAGGAGGAAAGGAACccaataaaaaagatttt
attttcaattctgTGGAATTTTTGTTTGACTTAGCAGATTGTATAAACTC
TTCAGCTTTTTGTGGTACATTATCTGCCTTTGGTAATTCTGAgtccaaaa
atttttcaaagcttttaaaTTGAATAGGCATATTAGCCGGCGtaatgttt
ttaaagtttttgtaaTGTCTTGAAAAAATCAagttgttaaaatatctttc
cttTGTAGGTTGTCTAAAATGGAAATCTTTCTCTTGAAAAACAGGTTTAT
CAAATTTTGGTGTGTTAATGTtatttgttttcttgaaatatgcATTAATA
GTGTTGGGACCAGCTTTAGACAAAATGTTGACTGTAATTTCTTCTGATTC
TTCATCAAGGGTAGAAGAGCCACTTTCTTGTATGGCAAGTGGTGAATAGC
ACGTCTCAGTCAAAACATCTTCATTGAAATCATCATCAGAGTAACCAGAA
CTATTCATAGCATGCAAAGAATTGTTTAAAAGCGTACTTTCCACAGCACA
TTGATGCAAATCTTCGATAGAATCTGAGAAAGAAACTGAACTGCTGATAT
CCCATGGGTCACTTTTTGGTAAAGCACAATTCATACCTAAAATTTCTAAG
TTAGGAGCACCAGCCTCAATTTGAACCTGTTTCAAAACACCTTCCTTGGT
CTTCATACTACCAATATCGGACAAATTAGTAAAACAAGAATTAGCTTCGA
TGCAACTTTCAGGATGATTCAGGATGTCCGGATTGGGTGAATCAATAATA
GAAGTATCATTTTCAGCAGAAACAGAGTCATAGAAAGAAACAGTAGCCCT
GATATTTGGGATACCACTTGTTGAGGAACTATTCTCAGATGGAATTTTAG
ATGCAGAGGGAGCAACAGCATCACTTTGAACCTGTTTCAAAACACCTTCC
CTGGTCTTCATACTACAAATATCAGACGCATTAGCAAAACTGAAATCAGC
TTCGATGCAACTTGATTCAGGAGAATTGGAAGAATCAATAGAATGTGATG
CCAGTGCAGAATTCAAGTGAAAAGTAGGGtgagttaaaatcaaattcaca
GCATTAGAAGAATCAGGAGTTTGAGACTTGAGTTTAGTAGTTAAAATTTC
CTTAAGACATATTCCAGatattttcattactttttcttttccccGACGTC
TAAATCTTTGATTTGTATAGGTTACTTCAATACCTTTCTTGGACAAAAGT
GATTTAAATTTTTCGAGAAAGACATCTGCACtgtttaaaacttttttctg
cAGAGAACAATGTTCATTGTAACTTTTcagtaatgaatttaaaaaagaaa
acttccCTTGTTGGACTTTGATGGATTCAACAAACCAGTCTTCCAAGCTT
GTATCGGATGCCATTTTAGctgaagatgaaaaaagatAGTTTAATATGAA
TATGGTTACCATTTCTAAAATTCAATATTATCTTTAAAAACCAACCATCT
ACATAGTtcggggatgacaccttccaaaaaagtgactaagggggaggggg
tcagaaatgttcattaaaaaggggggatagcaa
Run BLAST on NCBI

protein sequence of TCONS_00040780-protein

>TCONS_00040780-protein ID=TCONS_00040780-protein|Name=TCONS_00040780-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1320bp
MVTIFILNYLFSSSAKMASDTSLEDWFVESIKVQQGKFSFLNSLLKSYNE
HCSLQKKVLNSADVFLEKFKSLLSKKGIEVTYTNQRFRRRGKEKVMKISG
ICLKEILTTKLKSQTPDSSNAVNLILTHPTFHLNSALASHSIDSSNSPES
SCIEADFSFANASDICSMKTREGVLKQVQSDAVAPSASKIPSENSSSTSG
IPNIRATVSFYDSVSAENDTSIIDSPNPDILNHPESCIEANSCFTNLSDI
GSMKTKEGVLKQVQIEAGAPNLEILGMNCALPKSDPWDISSSVSFSDSIE
DLHQCAVESTLLNNSLHAMNSSGYSDDDFNEDVLTETCYSPLAIQESGSS
TLDEESEEITVNILSKAGPNTINAYFKKTNNINTPKFDKPVFQEKDFHFR
QPTKERYFNNLIFSRHYKNFKNITPANMPIQFKSFEKFLDSELPKADNVP
QKAEEFIQSAKSNKNSTELKIKSFLLGSFPPILTGNTAHKTIVDLAPNIH
FPQFSLLSYTNSLKFSCNTXLKDIAVLYKNKLGVTSYSDLKELFCLPSKT
CVVQHSKENKLHVGLNEEVFDKAIELYGGGPVVEASDEARTLRFLSPVVG
KNNEIELIGKCWDVDISKWEDSRIFLKNVITKENSVDEFSALKGFIKEMR
SSNTFAKDTAIHNFVAASGALSKPLVFMFWPTANSGYCAPNLLKIWDVVR
KHCFLDNDGILRENPVNLLGHSTDSAGFQLAAAVALMTPQSKIIDVGVKY
LTLGVGESKFAAPYFGPLPFIAYLDFDHNLRLFLKCLKYTTLDLNIFPSK
AGSYVVTINHLKELKQIADDSGVSCDFSNNDLLFARYLDQNSDAALKVFT
SSVADLLQENVPGSAGTVLYIRGVVALFDPFLNPCSNPILMQENISKGIT
IFRIWRRILELKKKRLNATSGAAKNPSKRGMFLTYGCYKTAEILFTAATC
HMLAIFAHFNHLGPSALSPFKCGTKTTERIISELQGKTNKLQSLDAQPTL
SDISSRLSKVQANQFSEDSILARGGKKHQSTNRRRLSHKWKNVDSNSNYK
FPDSYELFRDAQRKAFRSGVRKGIELFKNQCPEGANFVKENGDFGFLQSF
DNGVPCESEFDGALNHGYAIDKLKNLNPSELLTSKAEKKEKKITDYLNPE
DVDEQKKADQDDKLEMEPNEPSADESIIERASAKSIEPSCSGCEIFADEK
LSEEETKKVYVESKKAPALSCKAGEKSSSEEARVVSVRSKETSQKNCDLE
KTEVKAQDVELELSDGELEVKEEERLDQRWYLTRLIRGKLSSVHLKQALK
ILIPREYVSRERSRRHIASK
Run BLAST on NCBI

transcript from alignment at sc0002557:6879..10961

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040780 ID=TCONS_00040780|Name=TCONS_00040780|organism=Clytia hemisphaerica|type=transcript|length=4083bp|location=Sequence derived from alignment at sc0002557:6879..10961 (Clytia hemisphaerica)
ttgctatcccccctttttaatgaacatttctgaccccctcccccttagtc acttttttggaaggtgtcatccccgaACTATGTAGATGGTTGGTTTTTAA AGATAATATTGAATTTTAGAAATGGTAACCATATTCATATTAAACTatct tttttcatcttcagCTAAAATGGCATCCGATACAAGCTTGGAAGACTGGT TTGTTGAATCCATCAAAGTCCAACAAGggaagttttcttttttaaattca ttactgAAAAGTTACAATGAACATTGTTCTCTgcagaaaaaagttttaaa caGTGCAGATGTCTTTCTCGAAAAATTTAAATCACTTTTGTCCAAGAAAG GTATTGAAGTAACCTATACAAATCAAAGATTTAGACGTCggggaaaagaa aaagtaatgaaaatatCTGGAATATGTCTTAAGGAAATTTTAACTACTAA ACTCAAGTCTCAAACTCCTGATTCTTCTAATGCtgtgaatttgattttaa ctcaCCCTACTTTTCACTTGAATTCTGCACTGGCATCACATTCTATTGAT TCTTCCAATTCTCCTGAATCAAGTTGCATCGAAGCTGATTTCAGTTTTGC TAATGCGTCTGATATTTGTAGTATGAAGACCAGGGAAGGTGTTTTGAAAC AGGTTCAAAGTGATGCTGTTGCTCCCTCTGCATCTAAAATTCCATCTGAG AATAGTTCCTCAACAAGTGGTATCCCAAATATCAGGGCTACTGTTTCTTT CTATGACTCTGTTTCTGCTGAAAATGATACTTCTATTATTGATTCACCCA ATCCGGACATCCTGAATCATCCTGAAAGTTGCATCGAAGCTAATTCTTGT TTTACTAATTTGTCCGATATTGGTAGTATGAAGACCAAGGAAGGTGTTTT GAAACAGGTTCAAATTGAGGCTGGTGCTCCTAACTTAGAAATTTTAGGTA TGAATTGTGCTTTACCAAAAAGTGACCCATGGGATATCAGCAGTTCAGTT TCTTTCTCAGATTCTATCGAAGATTTGCATCAATGTGCTGTGGAAAGTAC GCTTTTAAACAATTCTTTGCATGCTATGAATAGTTCTGGTTACTCTGATG ATGATTTCAATGAAGATGTTTTGACTGAGACGTGCTATTCACCACTTGCC ATACAAGAAAGTGGCTCTTCTACCCTTGATGAAGAATCAGAAGAAATTAC AGTCAACATTTTGTCTAAAGCTGGTCCCAACACTATTAATgcatatttca agaaaacaaataACATTAACACACCAAAATTTGATAAACCTGTTTTTCAA GAGAAAGATTTCCATTTTAGACAACCTACAaaggaaagatattttaacaa ctTGATTTTTTCAAGACAttacaaaaactttaaaaacattaCGCCGGCTA ATATGCCTATTCAAtttaaaagctttgaaaaatttttggacTCAGAATTA CCAAAGGCAGATAATGTACCACAAAAAGCTGAAGAGTTTATACAATCTGC TAAGTCAAACAAAAATTCCAcagaattgaaaataaaatcttttttattgg GTTCCTTTCCTCCTATTTTAACGGGAAACACAGCGCACAAGACAATAGTT GACCTTGCTCCTAATATTCATTTTCCGCAGTTTTCTTTGCTCAGCTATAC CAATAGTCTTAAATTTTCTTGCAATACTTGNCTTAAAGATATTGCCGTCC TGTACAAGAATAAACTAGGAGTGACTAGCTACAGTGACCTTAAGGAGTTA TTTTGTTTACCCAGCAAAACTTGTGTGGTGCAACATTCCAAAGAAAACAA ATTGCATGTTGGCTTGAACGAGGAGGTTTTTGATAAAGCTATAGAGCTTT ATGGTGGTGGCCCAGTTGTAGAAGCGTCCGATGAGGCAAGGACACTGCGT TTTTTATCTCCTGTAGTTGGAAAGAACAATGAAATTGAGCTGATTGGAAA ATGTTGGGATGTTGATATTAGCAAATGGGAAGATTCGCGTATATTCTTGA AAAAtgttataacaaaagaaaattctgtGGATGAGTTCTCTGCGTTGAAG GGTTTTATAAAGGAAATGAGGTCTTCCAATACTTTTGCCAAAGACACAGC TATTCATAACTTTGTGGCTGCATCAGGTGCCTTATCAAAACCATTAGTGT TCATGTTTTGGCCAACTGCAAATTCAGGCTACTGTGCCCCTAACCTTCTT AAAATTTGGGATGTTGTCAGAAAACATTGTTTCCTTGATAACGATGGGAT TTTGAGAGAGAATCCGGTTAATCTATTAGGCCACAGTACAGACAGCGCGG GCTTTCAGCTTGCGGCTGCTGTTGCACTAATGACACCGCAGTCTAAAATC ATTGATGTTGGTGTAAAGTATTTAACACTTGGTGTAGGAGAGAGTAAGTT TGCAGCACCTTATTTCGGACCCCTTCCATTCATTGCTTATTTAGACTTCG ATCATAATCTACGTTTGTTCCTCAAGTGTCTGAAATACACAACATTGGAC TTAAACATCTTTCCATCAAAGGCAGGCTCCTATGTTGTCACAATCAATCA TTTGAAAGAGTTAAAGCAAATAGCTGACGATAGCGGTGTTTCTTGTGACT TCAGCAACAATGATCTTTTGTTTGCTCGCTATTTAGACCAGAATAGTGAT GCTGCTTTGAAGGTATTCACCTCATCGGTTGCTGATTTGCTCCAAGAAAA TGTACCTGGATCTGCTGGTACTGTCTTATACATCAGAGGTGTTGTTGCAC TTTTTGACCCGTTTTTAAACCCATGTTCAAACCCAATCTTGATGCAGGAA AATATTTCCAAAGGAATAACAATTTTTCGAATTTGGCGAAGGATTcttga attaaagaaaaaaaggttGAATGCCACAAGTGGTGCtgcaaaaaatccat caaaaagaGGAATGTTTCTTACATATGGGTGTTATAAGACAGCTGAAATC TTATTTACTGCTGCCACTTGCCACATGCTAGcaatttttgctcattttaa TCATCTTGGCCCCTCTGCTCTTTCTCCATTTAAATGTGGTACCAAAACCA CAGAAAGGATTATCAGTGAACTTCAGGGGAAAACTAATAAACTCCAATCT TTGGATGCTCAGCCCACTTTATCTGACATTTCAAGTAGATTATCTAAAGT TCAGGCAAATCAATTTTCAGAGGATAGTATTCTTGCTAGGGGTGGTAAAA AACATCAGTCTACTAACAGAAGACGATTGTCACATAAATGGAAAAATGTC GATTCAAATTCAAACTACAAATTTCCTGATTCATATGAACTGTTTAGAGA TGCTCAACGGAAAGCCTTTCGATCAGGAGTAAGAAAGGGAATTGAATTGT TCAAAAATCAATGTCCTGAAGGTGCTAACTTTGTCAAGGAAAATggagat tttggatttttacaATCTTTTGACAATGGCGTACCCTGTGAGAGTGAATT TGATGGGGCTTTAAATCACGGTTATGCGATAGACAAgctaaagaatttaa atccaaGTGAATTACTAACTTCCAAAGCAgaaaagaaggagaagaaaata ACTGACTATTTAAACCCTGAAGATGTGGATGAGCAAAAGAAAGCTGACCA GGATGATAAGCTTGAAATGGAACCCAATGAACCTTCTGCAGATGAATCAA TTATTGAGAGAGCCTCCGCAAAAAGTATTGAGCCATCATGCTCTGGTTGT GAGATTTTTGCAGATGAGAAATTGTCAGAAGAGGAAACAAAGAAAGTCTA TGTTGAGAGCAAGAAGGCCCCAGCATTGAGTTGTAAAGCAGGTGAGAAAT CATCCAGTGAAGAAGCAAGGGTGGTCTCTGTTAGAAGCAAGGAGACTTCA CAAAAGAATTGTGATCTTGAGAAAACTGAAGTTAAGGCTCAAGATGTAGA ACTTGAACTTTCAGATGGAGAGCTCGAAGTCAAAGAAGAAGAGCGTTTGG ATCAAAGGTGGTATTTAACGAGGTTAATTAGAGGGAAATTGAGCAGTGTT CATTTGAAACAGGCGTTGAAAATTCTTATTCCTAGGGAATATGTTTCCAG AGAGCGATCACGTAGACACATTGCTTCAAAATT

Coding sequence (CDS) from alignment at sc0002557:6879..10961

>TCONS_00040780 ID=TCONS_00040780|Name=TCONS_00040780|organism=Clytia hemisphaerica|type=CDS|length=3960bp|location=Sequence derived from alignment at sc0002557:6879..10961 (Clytia hemisphaerica)
ATGGTAACCATATTCATATTAAACTatcttttttcatcttcagCTAAAAT
GGCATCCGATACAAGCTTGGAAGACTGGTTTGTTGAATCCATCAAAGTCC
AACAAGggaagttttcttttttaaattcattactgAAAAGTTACAATGAA
CATTGTTCTCTgcagaaaaaagttttaaacaGTGCAGATGTCTTTCTCGA
AAAATTTAAATCACTTTTGTCCAAGAAAGGTATTGAAGTAACCTATACAA
ATCAAAGATTTAGACGTCggggaaaagaaaaagtaatgaaaatatCTGGA
ATATGTCTTAAGGAAATTTTAACTACTAAACTCAAGTCTCAAACTCCTGA
TTCTTCTAATGCtgtgaatttgattttaactcaCCCTACTTTTCACTTGA
ATTCTGCACTGGCATCACATTCTATTGATTCTTCCAATTCTCCTGAATCA
AGTTGCATCGAAGCTGATTTCAGTTTTGCTAATGCGTCTGATATTTGTAG
TATGAAGACCAGGGAAGGTGTTTTGAAACAGGTTCAAAGTGATGCTGTTG
CTCCCTCTGCATCTAAAATTCCATCTGAGAATAGTTCCTCAACAAGTGGT
ATCCCAAATATCAGGGCTACTGTTTCTTTCTATGACTCTGTTTCTGCTGA
AAATGATACTTCTATTATTGATTCACCCAATCCGGACATCCTGAATCATC
CTGAAAGTTGCATCGAAGCTAATTCTTGTTTTACTAATTTGTCCGATATT
GGTAGTATGAAGACCAAGGAAGGTGTTTTGAAACAGGTTCAAATTGAGGC
TGGTGCTCCTAACTTAGAAATTTTAGGTATGAATTGTGCTTTACCAAAAA
GTGACCCATGGGATATCAGCAGTTCAGTTTCTTTCTCAGATTCTATCGAA
GATTTGCATCAATGTGCTGTGGAAAGTACGCTTTTAAACAATTCTTTGCA
TGCTATGAATAGTTCTGGTTACTCTGATGATGATTTCAATGAAGATGTTT
TGACTGAGACGTGCTATTCACCACTTGCCATACAAGAAAGTGGCTCTTCT
ACCCTTGATGAAGAATCAGAAGAAATTACAGTCAACATTTTGTCTAAAGC
TGGTCCCAACACTATTAATgcatatttcaagaaaacaaataACATTAACA
CACCAAAATTTGATAAACCTGTTTTTCAAGAGAAAGATTTCCATTTTAGA
CAACCTACAaaggaaagatattttaacaactTGATTTTTTCAAGACAtta
caaaaactttaaaaacattaCGCCGGCTAATATGCCTATTCAAtttaaaa
gctttgaaaaatttttggacTCAGAATTACCAAAGGCAGATAATGTACCA
CAAAAAGCTGAAGAGTTTATACAATCTGCTAAGTCAAACAAAAATTCCAc
agaattgaaaataaaatcttttttattggGTTCCTTTCCTCCTATTTTAA
CGGGAAACACAGCGCACAAGACAATAGTTGACCTTGCTCCTAATATTCAT
TTTCCGCAGTTTTCTTTGCTCAGCTATACCAATAGTCTTAAATTTTCTTG
CAATACTTGNCTTAAAGATATTGCCGTCCTGTACAAGAATAAACTAGGAG
TGACTAGCTACAGTGACCTTAAGGAGTTATTTTGTTTACCCAGCAAAACT
TGTGTGGTGCAACATTCCAAAGAAAACAAATTGCATGTTGGCTTGAACGA
GGAGGTTTTTGATAAAGCTATAGAGCTTTATGGTGGTGGCCCAGTTGTAG
AAGCGTCCGATGAGGCAAGGACACTGCGTTTTTTATCTCCTGTAGTTGGA
AAGAACAATGAAATTGAGCTGATTGGAAAATGTTGGGATGTTGATATTAG
CAAATGGGAAGATTCGCGTATATTCTTGAAAAAtgttataacaaaagaaa
attctgtGGATGAGTTCTCTGCGTTGAAGGGTTTTATAAAGGAAATGAGG
TCTTCCAATACTTTTGCCAAAGACACAGCTATTCATAACTTTGTGGCTGC
ATCAGGTGCCTTATCAAAACCATTAGTGTTCATGTTTTGGCCAACTGCAA
ATTCAGGCTACTGTGCCCCTAACCTTCTTAAAATTTGGGATGTTGTCAGA
AAACATTGTTTCCTTGATAACGATGGGATTTTGAGAGAGAATCCGGTTAA
TCTATTAGGCCACAGTACAGACAGCGCGGGCTTTCAGCTTGCGGCTGCTG
TTGCACTAATGACACCGCAGTCTAAAATCATTGATGTTGGTGTAAAGTAT
TTAACACTTGGTGTAGGAGAGAGTAAGTTTGCAGCACCTTATTTCGGACC
CCTTCCATTCATTGCTTATTTAGACTTCGATCATAATCTACGTTTGTTCC
TCAAGTGTCTGAAATACACAACATTGGACTTAAACATCTTTCCATCAAAG
GCAGGCTCCTATGTTGTCACAATCAATCATTTGAAAGAGTTAAAGCAAAT
AGCTGACGATAGCGGTGTTTCTTGTGACTTCAGCAACAATGATCTTTTGT
TTGCTCGCTATTTAGACCAGAATAGTGATGCTGCTTTGAAGGTATTCACC
TCATCGGTTGCTGATTTGCTCCAAGAAAATGTACCTGGATCTGCTGGTAC
TGTCTTATACATCAGAGGTGTTGTTGCACTTTTTGACCCGTTTTTAAACC
CATGTTCAAACCCAATCTTGATGCAGGAAAATATTTCCAAAGGAATAACA
ATTTTTCGAATTTGGCGAAGGATTcttgaattaaagaaaaaaaggttGAA
TGCCACAAGTGGTGCtgcaaaaaatccatcaaaaagaGGAATGTTTCTTA
CATATGGGTGTTATAAGACAGCTGAAATCTTATTTACTGCTGCCACTTGC
CACATGCTAGcaatttttgctcattttaaTCATCTTGGCCCCTCTGCTCT
TTCTCCATTTAAATGTGGTACCAAAACCACAGAAAGGATTATCAGTGAAC
TTCAGGGGAAAACTAATAAACTCCAATCTTTGGATGCTCAGCCCACTTTA
TCTGACATTTCAAGTAGATTATCTAAAGTTCAGGCAAATCAATTTTCAGA
GGATAGTATTCTTGCTAGGGGTGGTAAAAAACATCAGTCTACTAACAGAA
GACGATTGTCACATAAATGGAAAAATGTCGATTCAAATTCAAACTACAAA
TTTCCTGATTCATATGAACTGTTTAGAGATGCTCAACGGAAAGCCTTTCG
ATCAGGAGTAAGAAAGGGAATTGAATTGTTCAAAAATCAATGTCCTGAAG
GTGCTAACTTTGTCAAGGAAAATggagattttggatttttacaATCTTTT
GACAATGGCGTACCCTGTGAGAGTGAATTTGATGGGGCTTTAAATCACGG
TTATGCGATAGACAAgctaaagaatttaaatccaaGTGAATTACTAACTT
CCAAAGCAgaaaagaaggagaagaaaataACTGACTATTTAAACCCTGAA
GATGTGGATGAGCAAAAGAAAGCTGACCAGGATGATAAGCTTGAAATGGA
ACCCAATGAACCTTCTGCAGATGAATCAATTATTGAGAGAGCCTCCGCAA
AAAGTATTGAGCCATCATGCTCTGGTTGTGAGATTTTTGCAGATGAGAAA
TTGTCAGAAGAGGAAACAAAGAAAGTCTATGTTGAGAGCAAGAAGGCCCC
AGCATTGAGTTGTAAAGCAGGTGAGAAATCATCCAGTGAAGAAGCAAGGG
TGGTCTCTGTTAGAAGCAAGGAGACTTCACAAAAGAATTGTGATCTTGAG
AAAACTGAAGTTAAGGCTCAAGATGTAGAACTTGAACTTTCAGATGGAGA
GCTCGAAGTCAAAGAAGAAGAGCGTTTGGATCAAAGGTGGTATTTAACGA
GGTTAATTAGAGGGAAATTGAGCAGTGTTCATTTGAAACAGGCGTTGAAA
ATTCTTATTCCTAGGGAATATGTTTCCAGAGAGCGATCACGTAGACACAT
TGCTTCAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024854XLOC_024854Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040780-proteinTCONS_00040780-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040780-exon-sc0002557-1491911889:6879..10961TCONS_00040780-exon-sc0002557-1491911889:6879..10961Clytia hemisphaericaexon
TCONS_00040780-exon-sc0002557-1510915933:6879..10961TCONS_00040780-exon-sc0002557-1510915933:6879..10961Clytia hemisphaericaexon
TCONS_00040780-exon-sc0002557-1575043694:6879..10961TCONS_00040780-exon-sc0002557-1575043694:6879..10961Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002557supercontigsc0002557:6879..10961 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.21597 4.79295 2.02247 1.46374 4.16655 3.59705 4.48087 5.53829 4.34528 3.96783 6.7294 5.89612 6.4625 6.10757 5.5211 6.15928 3.47811 4.34741 1.78083 1.72784 3.4532 3.30147 1.90252 2.6607 14.7348 24.8878 1.25475 0.465716 1.76239 1.56354
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040780 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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