XLOC_024854 (gene) - C. hemisphaerica

Overview
NameXLOC_024854
Unique NameXLOC_024854
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002557:6879..10961-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024854 ID=XLOC_024854|Name=XLOC_024854|organism=Clytia hemisphaerica|type=gene|length=4083bp|location=Sequence derived from alignment at sc0002557:6879..10961- (Clytia hemisphaerica)
AATTTTGAAGCAATGTGTCTACGTGATCGCTCTCTGGAAACATATTCCCT
AGGAATAAGAATTTTCAACGCCTGTTTCAAATGAACACTGCTCAATTTCC
CTCTAATTAACCTCGTTAAATACCACCTTTGATCCAAACGCTCTTCTTCT
TTGACTTCGAGCTCTCCATCTGAAAGTTCAAGTTCTACATCTTGAGCCTT
AACTTCAGTTTTCTCAAGATCACAATTCTTTTGTGAAGTCTCCTTGCTTC
TAACAGAGACCACCCTTGCTTCTTCACTGGATGATTTCTCACCTGCTTTA
CAACTCAATGCTGGGGCCTTCTTGCTCTCAACATAGACTTTCTTTGTTTC
CTCTTCTGACAATTTCTCATCTGCAAAAATCTCACAACCAGAGCATGATG
GCTCAATACTTTTTGCGGAGGCTCTCTCAATAATTGATTCATCTGCAGAA
GGTTCATTGGGTTCCATTTCAAGCTTATCATCCTGGTCAGCTTTCTTTTG
CTCATCCACATCTTCAGGGTTTAAATAGTCAGTTATTTTCTTCTCCTTCT
TTTCTGCTTTGGAAGTTAGTAATTCACTTGGATTTAAATTCTTTAGCTTG
TCTATCGCATAACCGTGATTTAAAGCCCCATCAAATTCACTCTCACAGGG
TACGCCATTGTCAAAAGATTGTAAAAATCCAAAATCTCCATTTTCCTTGA
CAAAGTTAGCACCTTCAGGACATTGATTTTTGAACAATTCAATTCCCTTT
CTTACTCCTGATCGAAAGGCTTTCCGTTGAGCATCTCTAAACAGTTCATA
TGAATCAGGAAATTTGTAGTTTGAATTTGAATCGACATTTTTCCATTTAT
GTGACAATCGTCTTCTGTTAGTAGACTGATGTTTTTTACCACCCCTAGCA
AGAATACTATCCTCTGAAAATTGATTTGCCTGAACTTTAGATAATCTACT
TGAAATGTCAGATAAAGTGGGCTGAGCATCCAAAGATTGGAGTTTATTAG
TTTTCCCCTGAAGTTCACTGATAATCCTTTCTGTGGTTTTGGTACCACAT
TTAAATGGAGAAAGAGCAGAGGGGCCAAGATGATTAAAATGAGCAAAAAT
TGCTAGCATGTGGCAAGTGGCAGCAGTAAATAAGATTTCAGCTGTCTTAT
AACACCCATATGTAAGAAACATTCCTCTTTTTGATGGATTTTTTGCAGCA
CCACTTGTGGCATTCAACCTTTTTTTCTTTAATTCAAGAATCCTTCGCCA
AATTCGAAAAATTGTTATTCCTTTGGAAATATTTTCCTGCATCAAGATTG
GGTTTGAACATGGGTTTAAAAACGGGTCAAAAAGTGCAACAACACCTCTG
ATGTATAAGACAGTACCAGCAGATCCAGGTACATTTTCTTGGAGCAAATC
AGCAACCGATGAGGTGAATACCTTCAAAGCAGCATCACTATTCTGGTCTA
AATAGCGAGCAAACAAAAGATCATTGTTGCTGAAGTCACAAGAAACACCG
CTATCGTCAGCTATTTGCTTTAACTCTTTCAAATGATTGATTGTGACAAC
ATAGGAGCCTGCCTTTGATGGAAAGATGTTTAAGTCCAATGTTGTGTATT
TCAGACACTTGAGGAACAAACGTAGATTATGATCGAAGTCTAAATAAGCA
ATGAATGGAAGGGGTCCGAAATAAGGTGCTGCAAACTTACTCTCTCCTAC
ACCAAGTGTTAAATACTTTACACCAACATCAATGATTTTAGACTGCGGTG
TCATTAGTGCAACAGCAGCCGCAAGCTGAAAGCCCGCGCTGTCTGTACTG
TGGCCTAATAGATTAACCGGATTCTCTCTCAAAATCCCATCGTTATCAAG
GAAACAATGTTTTCTGACAACATCCCAAATTTTAAGAAGGTTAGGGGCAC
AGTAGCCTGAATTTGCAGTTGGCCAAAACATGAACACTAATGGTTTTGAT
AAGGCACCTGATGCAGCCACAAAGTTATGAATAGCTGTGTCTTTGGCAAA
AGTATTGGAAGACCTCATTTCCTTTATAAAACCCTTCAACGCAGAGAACT
CATCCACAGAATTTTCTTTTGTTATAACATTTTTCAAGAATATACGCGAA
TCTTCCCATTTGCTAATATCAACATCCCAACATTTTCCAATCAGCTCAAT
TTCATTGTTCTTTCCAACTACAGGAGATAAAAAACGCAGTGTCCTTGCCT
CATCGGACGCTTCTACAACTGGGCCACCACCATAAAGCTCTATAGCTTTA
TCAAAAACCTCCTCGTTCAAGCCAACATGCAATTTGTTTTCTTTGGAATG
TTGCACCACACAAGTTTTGCTGGGTAAACAAAATAACTCCTTAAGGTCAC
TGTAGCTAGTCACTCCTAGTTTATTCTTGTACAGGACGGCAATATCTTTA
AGNCAAGTATTGCAAGAAAATTTAAGACTATTGGTATAGCTGAGCAAAGA
AAACTGCGGAAAATGAATATTAGGAGCAAGGTCAACTATTGTCTTGTGCG
CTGTGTTTCCCGTTAAAATAGGAGGAAAGGAACCCAATAAAAAAGATTTT
ATTTTCAATTCTGTGGAATTTTTGTTTGACTTAGCAGATTGTATAAACTC
TTCAGCTTTTTGTGGTACATTATCTGCCTTTGGTAATTCTGAGTCCAAAA
ATTTTTCAAAGCTTTTAAATTGAATAGGCATATTAGCCGGCGTAATGTTT
TTAAAGTTTTTGTAATGTCTTGAAAAAATCAAGTTGTTAAAATATCTTTC
CTTTGTAGGTTGTCTAAAATGGAAATCTTTCTCTTGAAAAACAGGTTTAT
CAAATTTTGGTGTGTTAATGTTATTTGTTTTCTTGAAATATGCATTAATA
GTGTTGGGACCAGCTTTAGACAAAATGTTGACTGTAATTTCTTCTGATTC
TTCATCAAGGGTAGAAGAGCCACTTTCTTGTATGGCAAGTGGTGAATAGC
ACGTCTCAGTCAAAACATCTTCATTGAAATCATCATCAGAGTAACCAGAA
CTATTCATAGCATGCAAAGAATTGTTTAAAAGCGTACTTTCCACAGCACA
TTGATGCAAATCTTCGATAGAATCTGAGAAAGAAACTGAACTGCTGATAT
CCCATGGGTCACTTTTTGGTAAAGCACAATTCATACCTAAAATTTCTAAG
TTAGGAGCACCAGCCTCAATTTGAACCTGTTTCAAAACACCTTCCTTGGT
CTTCATACTACCAATATCGGACAAATTAGTAAAACAAGAATTAGCTTCGA
TGCAACTTTCAGGATGATTCAGGATGTCCGGATTGGGTGAATCAATAATA
GAAGTATCATTTTCAGCAGAAACAGAGTCATAGAAAGAAACAGTAGCCCT
GATATTTGGGATACCACTTGTTGAGGAACTATTCTCAGATGGAATTTTAG
ATGCAGAGGGAGCAACAGCATCACTTTGAACCTGTTTCAAAACACCTTCC
CTGGTCTTCATACTACAAATATCAGACGCATTAGCAAAACTGAAATCAGC
TTCGATGCAACTTGATTCAGGAGAATTGGAAGAATCAATAGAATGTGATG
CCAGTGCAGAATTCAAGTGAAAAGTAGGGTGAGTTAAAATCAAATTCACA
GCATTAGAAGAATCAGGAGTTTGAGACTTGAGTTTAGTAGTTAAAATTTC
CTTAAGACATATTCCAGATATTTTCATTACTTTTTCTTTTCCCCGACGTC
TAAATCTTTGATTTGTATAGGTTACTTCAATACCTTTCTTGGACAAAAGT
GATTTAAATTTTTCGAGAAAGACATCTGCACTGTTTAAAACTTTTTTCTG
CAGAGAACAATGTTCATTGTAACTTTTCAGTAATGAATTTAAAAAAGAAA
ACTTCCCTTGTTGGACTTTGATGGATTCAACAAACCAGTCTTCCAAGCTT
GTATCGGATGCCATTTTAGCTGAAGATGAAAAAAGATAGTTTAATATGAA
TATGGTTACCATTTCTAAAATTCAATATTATCTTTAAAAACCAACCATCT
ACATAGTTCGGGGATGACACCTTCCAAAAAAGTGACTAAGGGGGAGGGGG
TCAGAAATGTTCATTAAAAAGGGGGGATAGCAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00040780TCONS_00040780Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00040780-proteinTCONS_00040780-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002557supercontigsc0002557:6879..10961 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.22	4.79	2.02	1.46	4.17	3.6	4.48	5.54	4.35	3.97	6.73	5.9	6.46	6.11	5.52	6.16	3.48	4.35	1.78	1.73	3.45	3.3	1.9	2.66	14.73	24.89	1.25	0.47	1.76	1.56