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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040693 ID=TCONS_00040693|Name=TCONS_00040693|organism=Clytia hemisphaerica|type=transcript|length=480bp
AATTCTACGAGGTCACTACTCATCTCCGGGACTCTGAATATACAAAATTA
TAGCTAACCTACAAAGAATTGAGAATTTTCTCAGTAGTTTTTCAATATCG
ATTCCACTGAGATAATTCTGTTGTTGGAATATCGGCAAACAGgcgtttgt
tcttataagaatttCCGAATCTTTAAAAAGGTGTGAGATcgataatcaaa
acattacgacgtaaatgacaaattttctgtttttataaaaaatggaaTAT
TTCGCTTAGAAAAAAGTTAGCAAACAGTTTTAGACGGATTAAGGACTCGG
ATCGTCTAAAGATATAAGGCGTTTAAAGAATTAACGCCATCGAAGTATTT
ATTCTGGCCCATTATGTTGAGGCTTTATTTGTTTTTGTTTGGTTGTTTTG
TGGTTGCAACTTACGGTTGTCAAGATACAGACAAGAGATGTTCAAAGTGG
AAGCATTATTGTAACTCTAATGCGCATGTN Run BLAST on NCBI transcript from alignment at sc0002529:16518..17976+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040693 ID=TCONS_00040693|Name=TCONS_00040693|organism=Clytia hemisphaerica|type=transcript|length=1459bp|location=Sequence derived from alignment at sc0002529:16518..17976+ (Clytia hemisphaerica)
AATTCTACGAGGTCACTACTCATCTCCGGGACTCTGAATATACAAAATTA
TAGCTAACCTACAAAGAATTGAGAATTTTCTCAGTAGTTTTTCAATATCG
ATTCCACTGAGATAATTCTGTTGTTGGAATATCGGCAAACAGgcgtttgt
tcttataagaatttCCGAATCTTTAAAAAGGTGTGAGATcgataatcaaa
acattacgacgtaaatgacaaattttctgtttttataaaaaatggaaTAT
TTCGCTTAGAAAAAAGTTAGCAAACAGTTTTAGACGGATTAAGGACTCGG
ATCGTCTAAAGATATAAGGCGTTTAAAGAATTAACGCCATCGAAGTATTT
ATTCTGGCCCATTATGTTGAGGCTTTATTTGTTTTTGTTTGGTTGTTTTG
TGGTTGCAACTTACGGTAAGATAAACATTTCAGGTGGAAAACACTTCCTT
GTTGATCTGGGCATTGGAACCAATAACTTCACAACGCAGTCTCCCCCGAG
CGGTCGTTTTTTCATTTTTTTGGGGGGGTACCAAAAGGCGAGGGAAGCTG
TCACGGGGGGCAATTGTCCTAGAATCCACCAAAAGGATCCTCTGATGACT
AATTCCAGCTTCTCTTTTTCATCTTACCCACGAAATTataaaaagtcaag
aaaaagtATCCGTTTGATTTTGCGATTCTTTAAGTCGTTAAAAGGAAACT
GTTAATTTCTAATACGGGGGAACAAAATGCCAATTCAGGAAATGTTCTTA
CCTGATTCGACGCAGCTTTCGGTAAAGTACTGGTTGATTTTGTACTGGAG
AGTTCTCGGAAAGTTCACAGTAGTTTGCGGGATTCTGATAGAACTTAATC
GCAAGTGTGATAGTGATAAGATAAACCTGTGATGCTTGACACATTGAGAG
ATGTAACACTGTTTTTTTNGATTCTGATAGAACTTAATCGCAAGTGTGAT
AGTGATAAGATAAACCTGTGATGCTTGACACATTGAGAGATGTAACACTG
TTTTTTTATCATGATAAGGGTGATGATCTTGTGATATCTGGCTAACAATT
GAGcgcttttgaaagaaactaggGAATAATCTTATCAGTTTATTTTTTGC
ATACCGTGGTCTTCATTATTTAAGTTTAATAAAGCGGAGTCATGTGAAAT
AATTTTCGCGCAAGTAAATGTTTCAGTGAAAATTATGTTTAGTGGCTTGC
AACTGATAAATCCGATCTAGCTTTAAACTAGTAAAGGAAGTctctattct
tataaaaaaaatcagagATGTTACACCAAGATAGTTCTAGTATCACTGCT
CCAAAGAAGCGTTGGCCCAGTATCTGTCAGTAGCCTAAGTCATTTCTCTT
CAAATAAATATTAGTTATTTATCTTTCCCTCTATCCATCTTCAGGTTGTC
AAGATACAGACAAGAGATGTTCAAAGTGGAAGCATTATTGTAACTCTAAT
GCGCATGTN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040693-exon-sc0002529-1491911889:16518..16932 | TCONS_00040693-exon-sc0002529-1491911889:16518..16932 | Clytia hemisphaerica | exon |
| TCONS_00040693-exon-sc0002529-1510915933:16518..16932 | TCONS_00040693-exon-sc0002529-1510915933:16518..16932 | Clytia hemisphaerica | exon |
| TCONS_00040693-exon-sc0002529-1575043694:16518..16932 | TCONS_00040693-exon-sc0002529-1575043694:16518..16932 | Clytia hemisphaerica | exon |
| TCONS_00040693-exon-sc0002529-1491911889:17912..17976 | TCONS_00040693-exon-sc0002529-1491911889:17912..17976 | Clytia hemisphaerica | exon |
| TCONS_00040693-exon-sc0002529-1510915933:17912..17976 | TCONS_00040693-exon-sc0002529-1510915933:17912..17976 | Clytia hemisphaerica | exon |
| TCONS_00040693-exon-sc0002529-1575043694:17912..17976 | TCONS_00040693-exon-sc0002529-1575043694:17912..17976 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002529 | supercontig | sc0002529:16518..17976 + |
Blast
The following BLAST results are available for this feature:
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