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Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040677 ID=TCONS_00040677|Name=TCONS_00040677|organism=Clytia hemisphaerica|type=transcript|length=1606bpRun BLAST on NCBI transcript from alignment at sc0002523:3283..13354+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00040677 ID=TCONS_00040677|Name=TCONS_00040677|organism=Clytia hemisphaerica|type=transcript|length=10072bp|location=Sequence derived from alignment at sc0002523:3283..13354+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Blast
BLAST of TCONS_00040677 vs. Swiss-Prot (Human)
Match: ZN724 (Zinc finger protein 724 OS=Homo sapiens GN=ZNF724 PE=2 SV=3) HSP 1 Score: 228.794 bits (582), Expect = 6.350e-78 Identity = 107/209 (51.20%), Postives = 148/209 (70.81%), Query Frame = 3
Query: 540 GFKCKECGKSFKFNCDLKKHLRIHTGERPFKCQECGKCFSRSDVLTQHLIVHSSIRPFKCENCGKYF*SKTSLKEHIKLHTEEKPFKCEECGKCFKTKTSLKEHIKLHTEEKPFKCEECGKCFKTNGSLKQHKRIHTKEKSFKCEECVKCFQSKGNLKYHMTVHTGHKPFKCEKCGKSFPRKNSLKYHMTVHTGQKPFKCAECGKCFSV 1166
+KCKECGK+F + L +H IH GE+P+ C+ CG+ F++S LT+H +H+ +P+KCE CGK F ++L +H ++HT EKP+KCEECGK F ++L +H ++HT EKP+KCEECGK F T+ L HKRIHT EK +KCEEC K F L H +HTG KP+KC++CGK+F R ++L H +HTG+KP+KC ECGK F++
Sbjct: 281 AYKCKECGKAFNQSSTLTRHKIIHAGEKPYICEHCGRAFNQSSNLTKHKRIHTGDKPYKCEECGKAFNVSSTLTQHKRIHTGEKPYKCEECGKAFNVSSTLTQHKRIHTGEKPYKCEECGKAFNTSSHLTTHKRIHTGEKPYKCEECGKAFNQFSQLTTHKIIHTGEKPYKCKECGKAFKRSSNLTEHRIIHTGEKPYKCEECGKAFNL 489 HSP 2 Score: 82.0333 bits (201), Expect = 6.350e-78 Identity = 46/105 (43.81%), Postives = 57/105 (54.29%), Query Frame = 1
Query: 1174 ALNRHLYLHSEIKSFKIEECGKRFSQRGNLIRHSNIHNGIKSFKCKECGKCFSRKYILNIHSKTHKRIKHVQIEEKEKPFRCNKCCKCFNSLSNFTAHIKSHSKE 1488
L RH +H+ K +K EECGK F Q NL +H IH G K +KC+ECGK F+ L KH I EKP++C +C K FN SN T H K H+ E
Sbjct: 520 TLARHKIIHAGEKPYKCEECGKAFYQYSNLTQHKIIHTGEKPYKCEECGKAFNWSSTL---------TKHKVIHTGEKPYKCKECGKAFNQCSNLTTHKKIHAVE 615 HSP 3 Score: 227.639 bits (579), Expect = 1.349e-74 Identity = 107/208 (51.44%), Postives = 149/208 (71.63%), Query Frame = 3
Query: 537 KGFKCKECGKSFKFNCDLKKHLRIHTGERPFKCQECGKCFSRSDVLTQHLIVHSSIRPFKCENCGKYF*SKTSLKEHIKLHTEEKPFKCEECGKCFKTKTSLKEHIKLHTEEKPFKCEECGKCFKTNGSLKQHKRIHTKEKSFKCEECVKCFQSKGNLKYHMTVHTGHKPFKCEKCGKSFPRKNSLKYHMTVHTGQKPFKCAECGKCF 1160
K +K +ECGK+F + L H IHTGE +KC+ECGK F++S LT+H I+H+ +P+ CE+CG+ F ++L +H ++HT +KP+KCEECGK F ++L +H ++HT EKP+KCEECGK F + +L QHKRIHT EK +KCEEC K F + +L H +HTG KP+KCE+CGK+F + + L H +HTG+KP+KC ECGK F
Sbjct: 252 KSYKREECGKAFNISSHLTTHKIIHTGENAYKCKECGKAFNQSSTLTRHKIIHAGEKPYICEHCGRAFNQSSNLTKHKRIHTGDKPYKCEECGKAFNVSSTLTQHKRIHTGEKPYKCEECGKAFNVSSTLTQHKRIHTGEKPYKCEECGKAFNTSSHLTTHKRIHTGEKPYKCEECGKAFNQFSQLTTHKIIHTGEKPYKCKECGKAF 459 HSP 4 Score: 72.0182 bits (175), Expect = 1.349e-74 Identity = 41/104 (39.42%), Postives = 54/104 (51.92%), Query Frame = 1
Query: 1177 LNRHLYLHSEIKSFKIEECGKRFSQRGNLIRHSNIHNGIKSFKCKECGKCFSRKYILNIHSKTHKRIKHVQIEEKEKPFRCNKCCKCFNSLSNFTAHIKSHSKE 1488
L H +H+ K +K EECGK F+ +L H IH G K +KCKECGK F++ L +H I EKP++C +C K F SN T H H+ E
Sbjct: 465 LTEHRIIHTGEKPYKCEECGKAFNLSSHLTTHKKIHTGEKPYKCKECGKAFNQSSTL---------ARHKIIHAGEKPYKCEECGKAFYQYSNLTQHKIIHTGE 559 HSP 5 Score: 207.223 bits (526), Expect = 4.378e-68 Identity = 102/209 (48.80%), Postives = 138/209 (66.03%), Query Frame = 3
Query: 537 KGFKCKECGKSFKFNCDLKKHLRIHTGERPFKCQECGKCFSRSDVLTQHLIVHSSIRPFKCENCGKYF*SKTSLKEHIKLHTEEKPFKCEECGKCFKTKTSLKEHIKLHTEEKPFKCEECGKCFKTNGSLKQHKRIHTKEKSFKCEECVKCFQSKGNLKYHMTVHTGHKPFKCEKCGKSFPRKNSLKYHMTVHTGQKPFKCAECGKCFS 1163
K +KC+ECG +F + L H IHTGE+ +K +ECGK F+ S LT H I+H+ +KC+ CGK F ++L H +H EKP+ CE CG+ F ++L +H ++HT +KP+KCEECGK F + +L QHKRIHT EK +KCEEC K F L H +HTG KP+KCE+CGK+F + L H +HTG+KP+KC ECGK F+
Sbjct: 224 KHYKCEECGIAFNKSSHLNTHKIIHTGEKSYKREECGKAFNISSHLTTHKIIHTGENAYKCKECGKAFNQSSTLTRHKIIHAGEKPYICEHCGRAFNQSSNLTKHKRIHTGDKPYKCEECGKAFNVSSTLTQHKRIHTGEKPYKCEECGKAFNVSSTLTQHKRIHTGEKPYKCEECGKAFNTSSHLTTHKRIHTGEKPYKCEECGKAFN 432 HSP 6 Score: 70.4774 bits (171), Expect = 4.378e-68 Identity = 42/104 (40.38%), Postives = 56/104 (53.85%), Query Frame = 1
Query: 1177 LNRHLYLHSEIKSFKIEECGKRFSQRGNLIRHSNIHNGIKSFKCKECGKCFSRKYILNIHSKTHKRIKHVQIEEKEKPFRCNKCCKCFNSLSNFTAHIKSHSKE 1488
L H +H+ K +K +ECGK F + NL H IH G K +KC+ECGK F+ L+ H THK+ I EKP++C +C K FN S H H+ E
Sbjct: 437 LTTHKIIHTGEKPYKCKECGKAFKRSSNLTEHRIIHTGEKPYKCEECGKAFN----LSSHLTTHKK-----IHTGEKPYKCKECGKAFNQSSTLARHKIIHAGE 531 HSP 7 Score: 198.364 bits (503), Expect = 7.594e-67 Identity = 96/208 (46.15%), Postives = 135/208 (64.90%), Query Frame = 3
Query: 543 FKCKECGKSFKFNCDLKKHLRIHTGERPFKCQECGKCFSRSDVLTQHLIVHSSIRPFKCENCGKYF*SKTSLKEHIKLHTEEKPFKCEECGKCFKTKTSLKEHIKLHTEEKPFKCEECGKCFKTNGSLKQHKRIHTKEKSFKCEECVKCFQSKGNLKYHMTVHTGHKPFKCEKCGKSFPRKNSLKYHMTVHTGQKPFKCAECGKCFSV 1166
+K +ECGK+F + L +H RIHTG++ +KC+ECG F++S L H I+H+ + +K E CGK F + L H +HT E +KC+ECGK F ++L H +H EKP+ CE CG+ F + +L +HKRIHT +K +KCEEC K F L H +HTG KP+KCE+CGK+F ++L H +HTG+KP+KC ECGK F+
Sbjct: 198 YKLEECGKAFNVSSTLSQHKRIHTGQKHYKCEECGIAFNKSSHLNTHKIIHTGEKSYKREECGKAFNISSHLTTHKIIHTGENAYKCKECGKAFNQSSTLTRHKIIHAGEKPYICEHCGRAFNQSSNLTKHKRIHTGDKPYKCEECGKAFNVSSTLTQHKRIHTGEKPYKCEECGKAFNVSSTLTQHKRIHTGEKPYKCEECGKAFNT 405 HSP 8 Score: 75.485 bits (184), Expect = 7.594e-67 Identity = 46/104 (44.23%), Postives = 56/104 (53.85%), Query Frame = 1
Query: 1177 LNRHLYLHSEIKSFKIEECGKRFSQRGNLIRHSNIHNGIKSFKCKECGKCFSRKYILNIHSKTHKRIKHVQIEEKEKPFRCNKCCKCFNSLSNFTAHIKSHSKE 1488
L H +H+ K +K EECGK F+Q L H IH G K +KCKECGK F R L H RI H EKP++C +C K FN S+ T H K H+ E
Sbjct: 409 LTTHKRIHTGEKPYKCEECGKAFNQFSQLTTHKIIHTGEKPYKCKECGKAFKRSSNLTEH-----RIIHTG----EKPYKCEECGKAFNLSSHLTTHKKIHTGE 503 HSP 9 Score: 226.483 bits (576), Expect = 1.691e-65 Identity = 110/209 (52.63%), Postives = 146/209 (69.86%), Query Frame = 3
Query: 537 KGFKCKECGKSFKFNCDLKKHLRIHTGERPFKCQECGKCFSRSDVLTQHLIVHSSIRPFKCENCGKYF*SKTSLKEHIKLHTEEKPFKCEECGKCFKTKTSLKEHIKLHTEEKPFKCEECGKCFKTNGSLKQHKRIHTKEKSFKCEECVKCFQSKGNLKYHMTVHTGHKPFKCEKCGKSFPRKNSLKYHMTVHTGQKPFKCAECGKCFS 1163
K +KC+ECGK+F + L H RIHTGE+P+KC+ECGK F++ LT H I+H+ +P+KC+ CGK F ++L EH +HT EKP+KCEECGK F + L H K+HT EKP+KC+ECGK F + +L +HK IH EK +KCEEC K F NL H +HTG KP+KCE+CGK+F ++L H +HTG+KP+KC ECGK F+
Sbjct: 392 KPYKCEECGKAFNTSSHLTTHKRIHTGEKPYKCEECGKAFNQFSQLTTHKIIHTGEKPYKCKECGKAFKRSSNLTEHRIIHTGEKPYKCEECGKAFNLSSHLTTHKKIHTGEKPYKCKECGKAFNQSSTLARHKIIHAGEKPYKCEECGKAFYQYSNLTQHKIIHTGEKPYKCEECGKAFNWSSTLTKHKVIHTGEKPYKCKECGKAFN 600 HSP 10 Score: 226.098 bits (575), Expect = 2.672e-65 Identity = 109/209 (52.15%), Postives = 146/209 (69.86%), Query Frame = 3
Query: 537 KGFKCKECGKSFKFNCDLKKHLRIHTGERPFKCQECGKCFSRSDVLTQHLIVHSSIRPFKCENCGKYF*SKTSLKEHIKLHTEEKPFKCEECGKCFKTKTSLKEHIKLHTEEKPFKCEECGKCFKTNGSLKQHKRIHTKEKSFKCEECVKCFQSKGNLKYHMTVHTGHKPFKCEKCGKSFPRKNSLKYHMTVHTGQKPFKCAECGKCFS 1163
K + C+ CG++F + +L KH RIHTG++P+KC+ECGK F+ S LTQH +H+ +P+KCE CGK F ++L +H ++HT EKP+KCEECGK F T + L H ++HT EKP+KCEECGK F L HK IHT EK +KC+EC K F+ NL H +HTG KP+KCE+CGK+F + L H +HTG+KP+KC ECGK F+
Sbjct: 308 KPYICEHCGRAFNQSSNLTKHKRIHTGDKPYKCEECGKAFNVSSTLTQHKRIHTGEKPYKCEECGKAFNVSSTLTQHKRIHTGEKPYKCEECGKAFNTSSHLTTHKRIHTGEKPYKCEECGKAFNQFSQLTTHKIIHTGEKPYKCKECGKAFKRSSNLTEHRIIHTGEKPYKCEECGKAFNLSSHLTTHKKIHTGEKPYKCKECGKAFN 516 HSP 11 Score: 224.942 bits (572), Expect = 7.156e-65 Identity = 108/208 (51.92%), Postives = 147/208 (70.67%), Query Frame = 3
Query: 537 KGFKCKECGKSFKFNCDLKKHLRIHTGERPFKCQECGKCFSRSDVLTQHLIVHSSIRPFKCENCGKYF*SKTSLKEHIKLHTEEKPFKCEECGKCFKTKTSLKEHIKLHTEEKPFKCEECGKCFKTNGSLKQHKRIHTKEKSFKCEECVKCFQSKGNLKYHMTVHTGHKPFKCEKCGKSFPRKNSLKYHMTVHTGQKPFKCAECGKCF 1160
K +KC+ECGK+F + L +H RIHTGE+P+KC+ECGK F+ S LTQH +H+ +P+KCE CGK F + + L H ++HT EKP+KCEECGK F + L H +HT EKP+KC+ECGK FK + +L +H+ IHT EK +KCEEC K F +L H +HTG KP+KC++CGK+F + ++L H +H G+KP+KC ECGK F
Sbjct: 336 KPYKCEECGKAFNVSSTLTQHKRIHTGEKPYKCEECGKAFNVSSTLTQHKRIHTGEKPYKCEECGKAFNTSSHLTTHKRIHTGEKPYKCEECGKAFNQFSQLTTHKIIHTGEKPYKCKECGKAFKRSSNLTEHRIIHTGEKPYKCEECGKAFNLSSHLTTHKKIHTGEKPYKCKECGKAFNQSSTLARHKIIHAGEKPYKCEECGKAF 543 HSP 12 Score: 223.787 bits (569), Expect = 1.857e-64 Identity = 109/214 (50.93%), Postives = 146/214 (68.22%), Query Frame = 3
Query: 537 KGFKCKECGKSFKFNCDLKKHLRIHTGERPFKCQECGKCFSRSDVLTQHLIVHSSIRPFKCENCGKYF*SKTSLKEHIKLHTEEKPFKCEECGKCFKTKTSLKEHIKLHTEEKPFKCEECGKCFKTNGSLKQHKRIHTKEKSFKCEECVKCFQSKGNLKYHMTVHTGHKPFKCEKCGKSFPRKNSLKYHMTVHTGQKPFKCAECGKCFSVKRSF 1178
K +KC+ECGK+F + L +H RIHTGE+P+KC+ECGK F+ S LT H +H+ +P+KCE CGK F + L H +HT EKP+KC+ECGK FK ++L EH +HT EKP+KCEECGK F + L HK+IHT EK +KC+EC K F L H +H G KP+KCE+CGK+F + ++L H +HTG+KP+KC ECGK F+ +
Sbjct: 364 KPYKCEECGKAFNVSSTLTQHKRIHTGEKPYKCEECGKAFNTSSHLTTHKRIHTGEKPYKCEECGKAFNQFSQLTTHKIIHTGEKPYKCKECGKAFKRSSNLTEHRIIHTGEKPYKCEECGKAFNLSSHLTTHKKIHTGEKPYKCKECGKAFNQSSTLARHKIIHAGEKPYKCEECGKAFYQYSNLTQHKIIHTGEKPYKCEECGKAFNWSSTL 577 HSP 13 Score: 173.711 bits (439), Expect = 2.447e-59 Identity = 93/223 (41.70%), Postives = 131/223 (58.74%), Query Frame = 3
Query: 510 NNLVTKERGKGFKCKECGKSFKFNCDLKKHLRIHTGERPFKCQECGKCFSRSDVLTQHLIVHSSIRPFKCENCGKYF*SKTSLKEHIKLHTEEKPFKCEECGKCFKTKTSLKEHIKLHTEEKPFKCEECGKCFKTNGSLKQHKRIHTKEKSFKCEECVKCFQSKGNLKYHMTVHTGHKPFKCEKCGKSFPRKNSLKYHMTVHTGQKPFKCAECGKCFSVKRSF 1178
N +T + K F+C + K F + +H T + PFKC+ECGK F LTQH +H+++ +K E CGK F ++L +H ++HT +K +KCEECG F + L H +HT EK +K EECGK F + L HK IHT E ++KC+EC K F L H +H G KP+ CE CG++F + ++L H +HTG KP+KC ECGK F+V +
Sbjct: 134 NQCLTTTQSKIFQCDKYVKDFHKFSNSNRH---KTEKNPFKCKECGKSFCVLSHLTQHKRIHTTVNSYKLEECGKAFNVSSTLSQHKRIHTGQKHYKCEECGIAFNKSSHLNTHKIIHTGEKSYKREECGKAFNISSHLTTHKIIHTGENAYKCKECGKAFNQSSTLTRHKIIHAGEKPYICEHCGRAFNQSSNLTKHKRIHTGDKPYKCEECGKAFNVSSTL 353 HSP 14 Score: 75.0998 bits (183), Expect = 2.447e-59 Identity = 43/105 (40.95%), Postives = 57/105 (54.29%), Query Frame = 1
Query: 1174 ALNRHLYLHSEIKSFKIEECGKRFSQRGNLIRHSNIHNGIKSFKCKECGKCFSRKYILNIHSKTHKRIKHVQIEEKEKPFRCNKCCKCFNSLSNFTAHIKSHSKE 1488
L +H +H+ K +K EECGK F+ L +H IH G K +KC+ECGK F+ + H THKR I EKP++C +C K FN S T H H+ E
Sbjct: 352 TLTQHKRIHTGEKPYKCEECGKAFNVSSTLTQHKRIHTGEKPYKCEECGKAFN----TSSHLTTHKR-----IHTGEKPYKCEECGKAFNQFSQLTTHKIIHTGE 447 HSP 15 Score: 197.208 bits (500), Expect = 6.755e-55 Identity = 101/200 (50.50%), Postives = 132/200 (66.00%), Query Frame = 3
Query: 537 KGFKCKECGKSFKFNCDLKKHLRIHTGERPFKCQECGKCFSRSDVLTQHLIVHSSIRPFKCENCGKYF*SKTSLKEHIKLHTEEKPFKCEECGKCFKTKTSLKEHIKLHTEEKPFKCEECGKCFKTNGSLKQHKRIHTKEKSFKCEECVKCFQSKGNLKYHMTVHTGHKPFKCEKCGKSFPRKNSLKYHMTVHTGQKPFK 1136
K +KC+ECGK+F L H IHTGE+P+KC+ECGK F RS LT+H I+H+ +P+KCE CGK F + L H K+HT EKP+KC+ECGK F ++L H +H EKP+KCEECGK F +L QHK IHT EK +KCEEC K F L H +HTG KP+KC++CGK+F + ++L H +H +K K
Sbjct: 420 KPYKCEECGKAFNQFSQLTTHKIIHTGEKPYKCKECGKAFKRSSNLTEHRIIHTGEKPYKCEECGKAFNLSSHLTTHKKIHTGEKPYKCKECGKAFNQSSTLARHKIIHAGEKPYKCEECGKAFYQYSNLTQHKIIHTGEKPYKCEECGKAFNWSSTLTKHKVIHTGEKPYKCKECGKAFNQCSNLTTHKKIHAVEKSDK 619 HSP 16 Score: 191.815 bits (486), Expect = 4.570e-53 Identity = 99/212 (46.70%), Postives = 131/212 (61.79%), Query Frame = 3
Query: 543 FKCKECGKSFKFNCDLKKHLRIHTGERPFKCQECGKCFSRSDVLTQHLIVHSSIRPFKCENCGKYF*SKTSLKEHIKLHTEEKPFKCEECGKCFKTKTSLKEHIKLHTEEKPFKCEECGKCFKTNGSLKQHKRIHTKEKSFKCEECVKCFQSKGNLKYHMTVHTGHKPFKCEKCGKSFPRKNSLKYHMTVHTGQKPFKCAECGKCFSVKRSF 1178
FKCKECGKSF L +H RIHT +K +ECGK F+ S L+QH +H+ + +KCE CG F + L H +HT EK +K EECGK F + L H +HT E +KC+ECGK F + +L +HK IH EK + CE C + F NL H +HTG KP+KCE+CGK+F ++L H +HTG+KP+KC ECGK F+V +
Sbjct: 170 FKCKECGKSFCVLSHLTQHKRIHTTVNSYKLEECGKAFNVSSTLSQHKRIHTGQKHYKCEECGIAFNKSSHLNTHKIIHTGEKSYKREECGKAFNISSHLTTHKIIHTGENAYKCKECGKAFNQSSTLTRHKIIHAGEKPYICEHCGRAFNQSSNLTKHKRIHTGDKPYKCEECGKAFNVSSTLTQHKRIHTGEKPYKCEECGKAFNVSSTL 381 The following BLAST results are available for this feature:
BLAST of TCONS_00040677 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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